data_5RJO # _model_server_result.job_id 51QJChE2Wo72PsvXdDL1Hw _model_server_result.datetime_utc '2024-11-16 22:34:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rjo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 5RJO # _exptl.entry_id 5RJO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 212.043 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-bromo-1,3-dihydro-2H-indol-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.68 _cell.angle_gamma 90 _cell.entry_id 5RJO _cell.length_a 81.51 _cell.length_b 26.47 _cell.length_c 55.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H6 Br N O' _chem_comp.formula_weight 212.043 _chem_comp.id 1P8 _chem_comp.mon_nstd_flag . _chem_comp.name 6-bromo-1,3-dihydro-2H-indol-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C2 1P8 sing 1 n n C3 C2 1P8 doub 2 n y C3 C4 1P8 sing 3 n y C2 C11 1P8 sing 4 n y C4 C5 1P8 doub 5 n y C11 C10 1P8 doub 6 n y C5 C10 1P8 sing 7 n y C5 C6 1P8 sing 8 n n C10 N9 1P8 sing 9 n n C6 C7 1P8 sing 10 n n N9 C7 1P8 sing 11 n n C7 O8 1P8 doub 12 n n C6 H1 1P8 sing 13 n n C6 H2 1P8 sing 14 n n N9 H3 1P8 sing 15 n n C11 H4 1P8 sing 16 n n C4 H5 1P8 sing 17 n n C3 H6 1P8 sing 18 n n # _atom_sites.entry_id 5RJO _atom_sites.fract_transf_matrix[1][1] 0.012268 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002093 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.037779 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1P8 A 1 1501 1501 1P8 LIG . C 3 HOH A 1 1601 85 HOH HOH . C 3 HOH A 2 1602 210 HOH HOH . C 3 HOH A 3 1603 89 HOH HOH . C 3 HOH A 4 1604 158 HOH HOH . C 3 HOH A 5 1605 124 HOH HOH . C 3 HOH A 6 1606 98 HOH HOH . C 3 HOH A 7 1607 204 HOH HOH . C 3 HOH A 8 1608 33 HOH HOH . C 3 HOH A 9 1609 17 HOH HOH . C 3 HOH A 10 1610 143 HOH HOH . C 3 HOH A 11 1611 12 HOH HOH . C 3 HOH A 12 1612 214 HOH HOH . C 3 HOH A 13 1613 187 HOH HOH . C 3 HOH A 14 1614 1 HOH HOH . C 3 HOH A 15 1615 44 HOH HOH . C 3 HOH A 16 1616 129 HOH HOH . C 3 HOH A 17 1617 152 HOH HOH . C 3 HOH A 18 1618 65 HOH HOH . C 3 HOH A 19 1619 135 HOH HOH . C 3 HOH A 20 1620 206 HOH HOH . C 3 HOH A 21 1621 32 HOH HOH . C 3 HOH A 22 1622 182 HOH HOH . C 3 HOH A 23 1623 136 HOH HOH . C 3 HOH A 24 1624 80 HOH HOH . C 3 HOH A 25 1625 45 HOH HOH . C 3 HOH A 26 1626 194 HOH HOH . C 3 HOH A 27 1627 180 HOH HOH . C 3 HOH A 28 1628 19 HOH HOH . C 3 HOH A 29 1629 16 HOH HOH . C 3 HOH A 30 1630 39 HOH HOH . C 3 HOH A 31 1631 56 HOH HOH . C 3 HOH A 32 1632 138 HOH HOH . C 3 HOH A 33 1633 121 HOH HOH . C 3 HOH A 34 1634 64 HOH HOH . C 3 HOH A 35 1635 31 HOH HOH . C 3 HOH A 36 1636 9 HOH HOH . C 3 HOH A 37 1637 75 HOH HOH . C 3 HOH A 38 1638 37 HOH HOH . C 3 HOH A 39 1639 70 HOH HOH . C 3 HOH A 40 1640 36 HOH HOH . C 3 HOH A 41 1641 28 HOH HOH . C 3 HOH A 42 1642 191 HOH HOH . C 3 HOH A 43 1643 25 HOH HOH . C 3 HOH A 44 1644 60 HOH HOH . C 3 HOH A 45 1645 134 HOH HOH . C 3 HOH A 46 1646 48 HOH HOH . C 3 HOH A 47 1647 58 HOH HOH . C 3 HOH A 48 1648 83 HOH HOH . C 3 HOH A 49 1649 151 HOH HOH . C 3 HOH A 50 1650 39 HOH HOH . C 3 HOH A 51 1651 62 HOH HOH . C 3 HOH A 52 1652 50 HOH HOH . C 3 HOH A 53 1653 12 HOH HOH . C 3 HOH A 54 1654 126 HOH HOH . C 3 HOH A 55 1655 6 HOH HOH . C 3 HOH A 56 1656 72 HOH HOH . C 3 HOH A 57 1657 120 HOH HOH . C 3 HOH A 58 1658 35 HOH HOH . C 3 HOH A 59 1659 92 HOH HOH . C 3 HOH A 60 1660 67 HOH HOH . C 3 HOH A 61 1661 69 HOH HOH . C 3 HOH A 62 1662 130 HOH HOH . C 3 HOH A 63 1663 77 HOH HOH . C 3 HOH A 64 1664 6 HOH HOH . C 3 HOH A 65 1665 113 HOH HOH . C 3 HOH A 66 1666 37 HOH HOH . C 3 HOH A 67 1667 5 HOH HOH . C 3 HOH A 68 1668 14 HOH HOH . C 3 HOH A 69 1669 40 HOH HOH . C 3 HOH A 70 1670 131 HOH HOH . C 3 HOH A 71 1671 38 HOH HOH . C 3 HOH A 72 1672 3 HOH HOH . C 3 HOH A 73 1673 63 HOH HOH . C 3 HOH A 74 1674 29 HOH HOH . C 3 HOH A 75 1675 212 HOH HOH . C 3 HOH A 76 1676 71 HOH HOH . C 3 HOH A 77 1677 105 HOH HOH . C 3 HOH A 78 1678 22 HOH HOH . C 3 HOH A 79 1679 52 HOH HOH . C 3 HOH A 80 1680 82 HOH HOH . C 3 HOH A 81 1681 3 HOH HOH . C 3 HOH A 82 1682 165 HOH HOH . C 3 HOH A 83 1683 137 HOH HOH . C 3 HOH A 84 1684 11 HOH HOH . C 3 HOH A 85 1685 119 HOH HOH . C 3 HOH A 86 1686 5 HOH HOH . C 3 HOH A 87 1687 139 HOH HOH . C 3 HOH A 88 1688 175 HOH HOH . C 3 HOH A 89 1689 181 HOH HOH . C 3 HOH A 90 1690 9 HOH HOH . C 3 HOH A 91 1691 23 HOH HOH . C 3 HOH A 92 1692 84 HOH HOH . C 3 HOH A 93 1693 33 HOH HOH . C 3 HOH A 94 1694 19 HOH HOH . C 3 HOH A 95 1695 127 HOH HOH . C 3 HOH A 96 1696 86 HOH HOH . C 3 HOH A 97 1697 15 HOH HOH . C 3 HOH A 98 1698 13 HOH HOH . C 3 HOH A 99 1699 116 HOH HOH . C 3 HOH A 100 1700 88 HOH HOH . C 3 HOH A 101 1701 49 HOH HOH . C 3 HOH A 102 1702 192 HOH HOH . C 3 HOH A 103 1703 53 HOH HOH . C 3 HOH A 104 1704 90 HOH HOH . C 3 HOH A 105 1705 118 HOH HOH . C 3 HOH A 106 1706 10 HOH HOH . C 3 HOH A 107 1707 213 HOH HOH . C 3 HOH A 108 1708 22 HOH HOH . C 3 HOH A 109 1709 209 HOH HOH . C 3 HOH A 110 1710 42 HOH HOH . C 3 HOH A 111 1711 132 HOH HOH . C 3 HOH A 112 1712 215 HOH HOH . C 3 HOH A 113 1713 108 HOH HOH . C 3 HOH A 114 1714 179 HOH HOH . C 3 HOH A 115 1715 122 HOH HOH . C 3 HOH A 116 1716 34 HOH HOH . C 3 HOH A 117 1717 15 HOH HOH . C 3 HOH A 118 1718 117 HOH HOH . C 3 HOH A 119 1719 106 HOH HOH . C 3 HOH A 120 1720 10 HOH HOH . C 3 HOH A 121 1721 43 HOH HOH . C 3 HOH A 122 1722 25 HOH HOH . C 3 HOH A 123 1723 11 HOH HOH . C 3 HOH A 124 1724 207 HOH HOH . C 3 HOH A 125 1725 96 HOH HOH . C 3 HOH A 126 1726 205 HOH HOH . C 3 HOH A 127 1727 145 HOH HOH . C 3 HOH A 128 1728 94 HOH HOH . C 3 HOH A 129 1729 57 HOH HOH . C 3 HOH A 130 1730 95 HOH HOH . C 3 HOH A 131 1731 115 HOH HOH . C 3 HOH A 132 1732 160 HOH HOH . C 3 HOH A 133 1733 208 HOH HOH . C 3 HOH A 134 1734 109 HOH HOH . C 3 HOH A 135 1735 125 HOH HOH . C 3 HOH A 136 1736 91 HOH HOH . C 3 HOH A 137 1737 174 HOH HOH . C 3 HOH A 138 1738 8 HOH HOH . C 3 HOH A 139 1739 155 HOH HOH . C 3 HOH A 140 1740 199 HOH HOH . C 3 HOH A 141 1741 123 HOH HOH . C 3 HOH A 142 1742 81 HOH HOH . C 3 HOH A 143 1743 149 HOH HOH . C 3 HOH A 144 1744 41 HOH HOH . C 3 HOH A 145 1745 38 HOH HOH . C 3 HOH A 146 1746 163 HOH HOH . C 3 HOH A 147 1747 198 HOH HOH . C 3 HOH A 148 1748 23 HOH HOH . C 3 HOH A 149 1749 202 HOH HOH . C 3 HOH A 150 1750 76 HOH HOH . C 3 HOH A 151 1751 185 HOH HOH . C 3 HOH A 152 1752 61 HOH HOH . C 3 HOH A 153 1753 156 HOH HOH . C 3 HOH A 154 1754 114 HOH HOH . C 3 HOH A 155 1755 7 HOH HOH . C 3 HOH A 156 1756 2 HOH HOH . C 3 HOH A 157 1757 54 HOH HOH . C 3 HOH A 158 1758 55 HOH HOH . C 3 HOH A 159 1759 16 HOH HOH . C 3 HOH A 160 1760 190 HOH HOH . C 3 HOH A 161 1761 216 HOH HOH . C 3 HOH A 162 1762 31 HOH HOH . C 3 HOH A 163 1763 133 HOH HOH . C 3 HOH A 164 1764 27 HOH HOH . C 3 HOH A 165 1765 170 HOH HOH . C 3 HOH A 166 1766 51 HOH HOH . C 3 HOH A 167 1767 112 HOH HOH . C 3 HOH A 168 1768 110 HOH HOH . C 3 HOH A 169 1769 36 HOH HOH . C 3 HOH A 170 1770 186 HOH HOH . C 3 HOH A 171 1771 18 HOH HOH . C 3 HOH A 172 1772 30 HOH HOH . C 3 HOH A 173 1773 200 HOH HOH . C 3 HOH A 174 1774 28 HOH HOH . C 3 HOH A 175 1775 68 HOH HOH . C 3 HOH A 176 1776 193 HOH HOH . C 3 HOH A 177 1777 4 HOH HOH . C 3 HOH A 178 1778 103 HOH HOH . C 3 HOH A 179 1779 1 HOH HOH . C 3 HOH A 180 1780 201 HOH HOH . C 3 HOH A 181 1781 102 HOH HOH . C 3 HOH A 182 1782 73 HOH HOH . C 3 HOH A 183 1783 172 HOH HOH . C 3 HOH A 184 1784 29 HOH HOH . C 3 HOH A 185 1785 169 HOH HOH . C 3 HOH A 186 1786 13 HOH HOH . C 3 HOH A 187 1787 30 HOH HOH . C 3 HOH A 188 1788 21 HOH HOH . C 3 HOH A 189 1789 148 HOH HOH . C 3 HOH A 190 1790 26 HOH HOH . C 3 HOH A 191 1791 78 HOH HOH . C 3 HOH A 192 1792 111 HOH HOH . C 3 HOH A 193 1793 189 HOH HOH . C 3 HOH A 194 1794 196 HOH HOH . C 3 HOH A 195 1795 35 HOH HOH . C 3 HOH A 196 1796 34 HOH HOH . C 3 HOH A 197 1797 14 HOH HOH . C 3 HOH A 198 1798 79 HOH HOH . C 3 HOH A 199 1799 87 HOH HOH . C 3 HOH A 200 1800 97 HOH HOH . C 3 HOH A 201 1801 142 HOH HOH . C 3 HOH A 202 1802 24 HOH HOH . C 3 HOH A 203 1803 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O8 1P8 . . . B 2 -16.627 18.352 27.457 0.58 17.11 ? O8 1P8 1501 A 1 HETATM 2 C C7 1P8 . . . B 2 -17.025 17.203 27.357 0.58 16.58 ? C7 1P8 1501 A 1 HETATM 3 C C6 1P8 . . . B 2 -17.379 16.224 28.48 0.58 16.62 ? C6 1P8 1501 A 1 HETATM 4 N N9 1P8 . . . B 2 -17.178 16.532 26.138 0.58 16.54 ? N9 1P8 1501 A 1 HETATM 5 C C10 1P8 . . . B 2 -17.573 15.193 26.361 0.58 16.7 ? C10 1P8 1501 A 1 HETATM 6 C C11 1P8 . . . B 2 -17.802 14.185 25.441 0.58 17.4 ? C11 1P8 1501 A 1 HETATM 7 C C2 1P8 . . . B 2 -18.193 12.962 25.976 0.58 18.35 ? C2 1P8 1501 A 1 HETATM 8 BR BR1 1P8 . . . B 2 -18.513 11.507 24.738 0.58 20.84 ? BR1 1P8 1501 A 1 HETATM 9 C C5 1P8 . . . B 2 -17.713 14.967 27.763 0.58 16.44 ? C5 1P8 1501 A 1 HETATM 10 C C4 1P8 . . . B 2 -18.108 13.734 28.251 0.58 16.66 ? C4 1P8 1501 A 1 HETATM 11 C C3 1P8 . . . B 2 -18.364 12.701 27.339 0.58 17.6 ? C3 1P8 1501 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #