data_5RJY # _model_server_result.job_id U1Y2H7fU1JNri0UTEDKpWQ _model_server_result.datetime_utc '2025-08-05 16:13:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rjy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 5RJY # _exptl.entry_id 5RJY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 139.155 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1H-pyrazol-4-yl)methyl]acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.01 _cell.angle_gamma 90 _cell.entry_id 5RJY _cell.length_a 82.06 _cell.length_b 27.23 _cell.length_c 55.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RJY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H9 N3 O' _chem_comp.formula_weight 139.155 _chem_comp.id UV7 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1H-pyrazol-4-yl)methyl]acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C1 UV7 doub 358 n n N1 C4 UV7 sing 359 n y N1 N2 UV7 sing 360 n y C4 C3 UV7 doub 361 n y C C1 UV7 sing 362 n n C1 N UV7 sing 363 n n N2 C5 UV7 doub 364 n y C3 C5 UV7 sing 365 n y C3 C2 UV7 sing 366 n n N C2 UV7 sing 367 n n N1 H1 UV7 sing 368 n n C4 H2 UV7 sing 369 n n C5 H3 UV7 sing 370 n n N H4 UV7 sing 371 n n C H5 UV7 sing 372 n n C H6 UV7 sing 373 n n C H7 UV7 sing 374 n n C2 H8 UV7 sing 375 n n C2 H9 UV7 sing 376 n n # _atom_sites.entry_id 5RJY _atom_sites.fract_transf_matrix[1][1] 0.012186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002151 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018208 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UV7 A 1 1501 1501 UV7 LIG . C 3 HOH A 1 1601 150 HOH HOH . C 3 HOH A 2 1602 197 HOH HOH . C 3 HOH A 3 1603 89 HOH HOH . C 3 HOH A 4 1604 7 HOH HOH . C 3 HOH A 5 1605 98 HOH HOH . C 3 HOH A 6 1606 85 HOH HOH . C 3 HOH A 7 1607 121 HOH HOH . C 3 HOH A 8 1608 184 HOH HOH . C 3 HOH A 9 1609 141 HOH HOH . C 3 HOH A 10 1610 151 HOH HOH . C 3 HOH A 11 1611 183 HOH HOH . C 3 HOH A 12 1612 162 HOH HOH . C 3 HOH A 13 1613 33 HOH HOH . C 3 HOH A 14 1614 17 HOH HOH . C 3 HOH A 15 1615 140 HOH HOH . C 3 HOH A 16 1616 83 HOH HOH . C 3 HOH A 17 1617 10 HOH HOH . C 3 HOH A 18 1618 74 HOH HOH . C 3 HOH A 19 1619 12 HOH HOH . C 3 HOH A 20 1620 50 HOH HOH . C 3 HOH A 21 1621 187 HOH HOH . C 3 HOH A 22 1622 160 HOH HOH . C 3 HOH A 23 1623 154 HOH HOH . C 3 HOH A 24 1624 25 HOH HOH . C 3 HOH A 25 1625 65 HOH HOH . C 3 HOH A 26 1626 172 HOH HOH . C 3 HOH A 27 1627 123 HOH HOH . C 3 HOH A 28 1628 16 HOH HOH . C 3 HOH A 29 1629 84 HOH HOH . C 3 HOH A 30 1630 22 HOH HOH . C 3 HOH A 31 1631 20 HOH HOH . C 3 HOH A 32 1632 101 HOH HOH . C 3 HOH A 33 1633 16 HOH HOH . C 3 HOH A 34 1634 124 HOH HOH . C 3 HOH A 35 1635 94 HOH HOH . C 3 HOH A 36 1636 9 HOH HOH . C 3 HOH A 37 1637 14 HOH HOH . C 3 HOH A 38 1638 28 HOH HOH . C 3 HOH A 39 1639 60 HOH HOH . C 3 HOH A 40 1640 11 HOH HOH . C 3 HOH A 41 1641 59 HOH HOH . C 3 HOH A 42 1642 31 HOH HOH . C 3 HOH A 43 1643 5 HOH HOH . C 3 HOH A 44 1644 139 HOH HOH . C 3 HOH A 45 1645 62 HOH HOH . C 3 HOH A 46 1646 158 HOH HOH . C 3 HOH A 47 1647 4 HOH HOH . C 3 HOH A 48 1648 36 HOH HOH . C 3 HOH A 49 1649 70 HOH HOH . C 3 HOH A 50 1650 45 HOH HOH . C 3 HOH A 51 1651 176 HOH HOH . C 3 HOH A 52 1652 119 HOH HOH . C 3 HOH A 53 1653 55 HOH HOH . C 3 HOH A 54 1654 1 HOH HOH . C 3 HOH A 55 1655 3 HOH HOH . C 3 HOH A 56 1656 143 HOH HOH . C 3 HOH A 57 1657 182 HOH HOH . C 3 HOH A 58 1658 144 HOH HOH . C 3 HOH A 59 1659 21 HOH HOH . C 3 HOH A 60 1660 77 HOH HOH . C 3 HOH A 61 1661 35 HOH HOH . C 3 HOH A 62 1662 207 HOH HOH . C 3 HOH A 63 1663 130 HOH HOH . C 3 HOH A 64 1664 131 HOH HOH . C 3 HOH A 65 1665 11 HOH HOH . C 3 HOH A 66 1666 138 HOH HOH . C 3 HOH A 67 1667 76 HOH HOH . C 3 HOH A 68 1668 6 HOH HOH . C 3 HOH A 69 1669 19 HOH HOH . C 3 HOH A 70 1670 159 HOH HOH . C 3 HOH A 71 1671 29 HOH HOH . C 3 HOH A 72 1672 39 HOH HOH . C 3 HOH A 73 1673 108 HOH HOH . C 3 HOH A 74 1674 63 HOH HOH . C 3 HOH A 75 1675 18 HOH HOH . C 3 HOH A 76 1676 91 HOH HOH . C 3 HOH A 77 1677 64 HOH HOH . C 3 HOH A 78 1678 52 HOH HOH . C 3 HOH A 79 1679 54 HOH HOH . C 3 HOH A 80 1680 69 HOH HOH . C 3 HOH A 81 1681 15 HOH HOH . C 3 HOH A 82 1682 178 HOH HOH . C 3 HOH A 83 1683 92 HOH HOH . C 3 HOH A 84 1684 40 HOH HOH . C 3 HOH A 85 1685 23 HOH HOH . C 3 HOH A 86 1686 106 HOH HOH . C 3 HOH A 87 1687 44 HOH HOH . C 3 HOH A 88 1688 120 HOH HOH . C 3 HOH A 89 1689 42 HOH HOH . C 3 HOH A 90 1690 157 HOH HOH . C 3 HOH A 91 1691 113 HOH HOH . C 3 HOH A 92 1692 26 HOH HOH . C 3 HOH A 93 1693 43 HOH HOH . C 3 HOH A 94 1694 56 HOH HOH . C 3 HOH A 95 1695 132 HOH HOH . C 3 HOH A 96 1696 88 HOH HOH . C 3 HOH A 97 1697 71 HOH HOH . C 3 HOH A 98 1698 177 HOH HOH . C 3 HOH A 99 1699 202 HOH HOH . C 3 HOH A 100 1700 27 HOH HOH . C 3 HOH A 101 1701 116 HOH HOH . C 3 HOH A 102 1702 152 HOH HOH . C 3 HOH A 103 1703 82 HOH HOH . C 3 HOH A 104 1704 105 HOH HOH . C 3 HOH A 105 1705 9 HOH HOH . C 3 HOH A 106 1706 38 HOH HOH . C 3 HOH A 107 1707 80 HOH HOH . C 3 HOH A 108 1708 37 HOH HOH . C 3 HOH A 109 1709 48 HOH HOH . C 3 HOH A 110 1710 127 HOH HOH . C 3 HOH A 111 1711 81 HOH HOH . C 3 HOH A 112 1712 67 HOH HOH . C 3 HOH A 113 1713 122 HOH HOH . C 3 HOH A 114 1714 75 HOH HOH . C 3 HOH A 115 1715 2 HOH HOH . C 3 HOH A 116 1716 125 HOH HOH . C 3 HOH A 117 1717 181 HOH HOH . C 3 HOH A 118 1718 49 HOH HOH . C 3 HOH A 119 1719 134 HOH HOH . C 3 HOH A 120 1720 145 HOH HOH . C 3 HOH A 121 1721 22 HOH HOH . C 3 HOH A 122 1722 86 HOH HOH . C 3 HOH A 123 1723 57 HOH HOH . C 3 HOH A 124 1724 66 HOH HOH . C 3 HOH A 125 1725 90 HOH HOH . C 3 HOH A 126 1726 53 HOH HOH . C 3 HOH A 127 1727 165 HOH HOH . C 3 HOH A 128 1728 117 HOH HOH . C 3 HOH A 129 1729 29 HOH HOH . C 3 HOH A 130 1730 136 HOH HOH . C 3 HOH A 131 1731 118 HOH HOH . C 3 HOH A 132 1732 72 HOH HOH . C 3 HOH A 133 1733 175 HOH HOH . C 3 HOH A 134 1734 34 HOH HOH . C 3 HOH A 135 1735 95 HOH HOH . C 3 HOH A 136 1736 96 HOH HOH . C 3 HOH A 137 1737 174 HOH HOH . C 3 HOH A 138 1738 205 HOH HOH . C 3 HOH A 139 1739 58 HOH HOH . C 3 HOH A 140 1740 13 HOH HOH . C 3 HOH A 141 1741 109 HOH HOH . C 3 HOH A 142 1742 126 HOH HOH . C 3 HOH A 143 1743 166 HOH HOH . C 3 HOH A 144 1744 146 HOH HOH . C 3 HOH A 145 1745 18 HOH HOH . C 3 HOH A 146 1746 24 HOH HOH . C 3 HOH A 147 1747 12 HOH HOH . C 3 HOH A 148 1748 4 HOH HOH . C 3 HOH A 149 1749 153 HOH HOH . C 3 HOH A 150 1750 206 HOH HOH . C 3 HOH A 151 1751 129 HOH HOH . C 3 HOH A 152 1752 47 HOH HOH . C 3 HOH A 153 1753 164 HOH HOH . C 3 HOH A 154 1754 17 HOH HOH . C 3 HOH A 155 1755 2 HOH HOH . C 3 HOH A 156 1756 204 HOH HOH . C 3 HOH A 157 1757 185 HOH HOH . C 3 HOH A 158 1758 24 HOH HOH . C 3 HOH A 159 1759 133 HOH HOH . C 3 HOH A 160 1760 199 HOH HOH . C 3 HOH A 161 1761 115 HOH HOH . C 3 HOH A 162 1762 8 HOH HOH . C 3 HOH A 163 1763 194 HOH HOH . C 3 HOH A 164 1764 114 HOH HOH . C 3 HOH A 165 1765 1 HOH HOH . C 3 HOH A 166 1766 30 HOH HOH . C 3 HOH A 167 1767 30 HOH HOH . C 3 HOH A 168 1768 6 HOH HOH . C 3 HOH A 169 1769 61 HOH HOH . C 3 HOH A 170 1770 198 HOH HOH . C 3 HOH A 171 1771 107 HOH HOH . C 3 HOH A 172 1772 186 HOH HOH . C 3 HOH A 173 1773 51 HOH HOH . C 3 HOH A 174 1774 25 HOH HOH . C 3 HOH A 175 1775 112 HOH HOH . C 3 HOH A 176 1776 15 HOH HOH . C 3 HOH A 177 1777 110 HOH HOH . C 3 HOH A 178 1778 13 HOH HOH . C 3 HOH A 179 1779 156 HOH HOH . C 3 HOH A 180 1780 190 HOH HOH . C 3 HOH A 181 1781 10 HOH HOH . C 3 HOH A 182 1782 8 HOH HOH . C 3 HOH A 183 1783 201 HOH HOH . C 3 HOH A 184 1784 41 HOH HOH . C 3 HOH A 185 1785 19 HOH HOH . C 3 HOH A 186 1786 188 HOH HOH . C 3 HOH A 187 1787 193 HOH HOH . C 3 HOH A 188 1788 23 HOH HOH . C 3 HOH A 189 1789 78 HOH HOH . C 3 HOH A 190 1790 168 HOH HOH . C 3 HOH A 191 1791 102 HOH HOH . C 3 HOH A 192 1792 68 HOH HOH . C 3 HOH A 193 1793 27 HOH HOH . C 3 HOH A 194 1794 46 HOH HOH . C 3 HOH A 195 1795 103 HOH HOH . C 3 HOH A 196 1796 99 HOH HOH . C 3 HOH A 197 1797 73 HOH HOH . C 3 HOH A 198 1798 3 HOH HOH . C 3 HOH A 199 1799 208 HOH HOH . C 3 HOH A 200 1800 196 HOH HOH . C 3 HOH A 201 1801 28 HOH HOH . C 3 HOH A 202 1802 200 HOH HOH . C 3 HOH A 203 1803 31 HOH HOH . C 3 HOH A 204 1804 104 HOH HOH . C 3 HOH A 205 1805 148 HOH HOH . C 3 HOH A 206 1806 93 HOH HOH . C 3 HOH A 207 1807 87 HOH HOH . C 3 HOH A 208 1808 20 HOH HOH . C 3 HOH A 209 1809 111 HOH HOH . C 3 HOH A 210 1810 21 HOH HOH . C 3 HOH A 211 1811 7 HOH HOH . C 3 HOH A 212 1812 189 HOH HOH . C 3 HOH A 213 1813 97 HOH HOH . C 3 HOH A 214 1814 192 HOH HOH . C 3 HOH A 215 1815 79 HOH HOH . C 3 HOH A 216 1816 26 HOH HOH . C 3 HOH A 217 1817 5 HOH HOH . C 3 HOH A 218 1818 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UV7 . . . B 2 -18.185 15.696 24.891 0.5 15.44 ? N1 UV7 1501 A 1 HETATM 2 C C4 UV7 . . . B 2 -18.443 14.394 25.102 0.5 16.51 ? C4 UV7 1501 A 1 HETATM 3 C C5 UV7 . . . B 2 -19.116 15.502 26.933 0.5 16 ? C5 UV7 1501 A 1 HETATM 4 N N UV7 . . . B 2 -20.831 12.542 26.656 0.5 16.81 ? N UV7 1501 A 1 HETATM 5 C C UV7 . . . B 2 -22.569 11.629 25.183 0.5 17.94 ? C UV7 1501 A 1 HETATM 6 O O UV7 . . . B 2 -20.315 11.927 24.524 0.5 17.59 ? O UV7 1501 A 1 HETATM 7 C C1 UV7 . . . B 2 -21.145 12.027 25.411 0.5 17.57 ? C1 UV7 1501 A 1 HETATM 8 C C2 UV7 . . . B 2 -19.44 12.939 27.002 0.5 16.45 ? C2 UV7 1501 A 1 HETATM 9 C C3 UV7 . . . B 2 -19.031 14.224 26.373 0.5 16.01 ? C3 UV7 1501 A 1 HETATM 10 N N2 UV7 . . . B 2 -18.578 16.364 25.992 0.5 16.52 ? N2 UV7 1501 A 1 # _model_server_stats.io_time_ms 104 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #