data_5RKL # _model_server_result.job_id TYJjGeBVbBXrv4143_SWjA _model_server_result.datetime_utc '2024-11-23 23:42:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rkl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 5RKL # _exptl.entry_id 5RKL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 191.205 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-fluoro-N-[(1H-pyrazol-3-yl)methyl]aniline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.35 _cell.angle_gamma 90 _cell.entry_id 5RKL _cell.length_a 81.87 _cell.length_b 27.21 _cell.length_c 55.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RKL _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H10 F N3' _chem_comp.formula_weight 191.205 _chem_comp.id UWV _chem_comp.mon_nstd_flag . _chem_comp.name 2-fluoro-N-[(1H-pyrazol-3-yl)methyl]aniline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C8 UWV doub 358 n y C9 N1 UWV sing 359 n y C8 C7 UWV sing 360 n y C3 C2 UWV doub 361 n y C3 C4 UWV sing 362 n y N1 N2 UWV sing 363 n y C2 C1 UWV sing 364 n y C4 C5 UWV doub 365 n y C7 N2 UWV doub 366 n y C7 C6 UWV sing 367 n n C1 C UWV doub 368 n y C5 C UWV sing 369 n y C5 N UWV sing 370 n n C6 N UWV sing 371 n n C F UWV sing 372 n n N1 H1 UWV sing 373 n n C4 H2 UWV sing 374 n n C6 H3 UWV sing 375 n n C6 H4 UWV sing 376 n n C8 H5 UWV sing 377 n n N H6 UWV sing 378 n n C1 H7 UWV sing 379 n n C2 H8 UWV sing 380 n n C3 H9 UWV sing 381 n n C9 H10 UWV sing 382 n n # _atom_sites.entry_id 5RKL _atom_sites.fract_transf_matrix[1][1] 0.012214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002231 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036751 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UWV A 1 1501 1501 UWV LIG . C 3 HOH A 1 1601 89 HOH HOH . C 3 HOH A 2 1602 7 HOH HOH . C 3 HOH A 3 1603 85 HOH HOH . C 3 HOH A 4 1604 159 HOH HOH . C 3 HOH A 5 1605 197 HOH HOH . C 3 HOH A 6 1606 47 HOH HOH . C 3 HOH A 7 1607 141 HOH HOH . C 3 HOH A 8 1608 83 HOH HOH . C 3 HOH A 9 1609 17 HOH HOH . C 3 HOH A 10 1610 98 HOH HOH . C 3 HOH A 11 1611 160 HOH HOH . C 3 HOH A 12 1612 121 HOH HOH . C 3 HOH A 13 1613 179 HOH HOH . C 3 HOH A 14 1614 176 HOH HOH . C 3 HOH A 15 1615 157 HOH HOH . C 3 HOH A 16 1616 124 HOH HOH . C 3 HOH A 17 1617 33 HOH HOH . C 3 HOH A 18 1618 50 HOH HOH . C 3 HOH A 19 1619 10 HOH HOH . C 3 HOH A 20 1620 140 HOH HOH . C 3 HOH A 21 1621 16 HOH HOH . C 3 HOH A 22 1622 123 HOH HOH . C 3 HOH A 23 1623 172 HOH HOH . C 3 HOH A 24 1624 25 HOH HOH . C 3 HOH A 25 1625 187 HOH HOH . C 3 HOH A 26 1626 151 HOH HOH . C 3 HOH A 27 1627 65 HOH HOH . C 3 HOH A 28 1628 8 HOH HOH . C 3 HOH A 29 1629 94 HOH HOH . C 3 HOH A 30 1630 84 HOH HOH . C 3 HOH A 31 1631 31 HOH HOH . C 3 HOH A 32 1632 12 HOH HOH . C 3 HOH A 33 1633 20 HOH HOH . C 3 HOH A 34 1634 14 HOH HOH . C 3 HOH A 35 1635 9 HOH HOH . C 3 HOH A 36 1636 74 HOH HOH . C 3 HOH A 37 1637 101 HOH HOH . C 3 HOH A 38 1638 70 HOH HOH . C 3 HOH A 39 1639 154 HOH HOH . C 3 HOH A 40 1640 55 HOH HOH . C 3 HOH A 41 1641 167 HOH HOH . C 3 HOH A 42 1642 45 HOH HOH . C 3 HOH A 43 1643 36 HOH HOH . C 3 HOH A 44 1644 182 HOH HOH . C 3 HOH A 45 1645 6 HOH HOH . C 3 HOH A 46 1646 4 HOH HOH . C 3 HOH A 47 1647 44 HOH HOH . C 3 HOH A 48 1648 24 HOH HOH . C 3 HOH A 49 1649 105 HOH HOH . C 3 HOH A 50 1650 191 HOH HOH . C 3 HOH A 51 1651 66 HOH HOH . C 3 HOH A 52 1652 106 HOH HOH . C 3 HOH A 53 1653 24 HOH HOH . C 3 HOH A 54 1654 76 HOH HOH . C 3 HOH A 55 1655 35 HOH HOH . C 3 HOH A 56 1656 3 HOH HOH . C 3 HOH A 57 1657 62 HOH HOH . C 3 HOH A 58 1658 60 HOH HOH . C 3 HOH A 59 1659 184 HOH HOH . C 3 HOH A 60 1660 54 HOH HOH . C 3 HOH A 61 1661 5 HOH HOH . C 3 HOH A 62 1662 23 HOH HOH . C 3 HOH A 63 1663 26 HOH HOH . C 3 HOH A 64 1664 130 HOH HOH . C 3 HOH A 65 1665 28 HOH HOH . C 3 HOH A 66 1666 139 HOH HOH . C 3 HOH A 67 1667 82 HOH HOH . C 3 HOH A 68 1668 39 HOH HOH . C 3 HOH A 69 1669 21 HOH HOH . C 3 HOH A 70 1670 180 HOH HOH . C 3 HOH A 71 1671 1 HOH HOH . C 3 HOH A 72 1672 21 HOH HOH . C 3 HOH A 73 1673 20 HOH HOH . C 3 HOH A 74 1674 2 HOH HOH . C 3 HOH A 75 1675 29 HOH HOH . C 3 HOH A 76 1676 14 HOH HOH . C 3 HOH A 77 1677 52 HOH HOH . C 3 HOH A 78 1678 64 HOH HOH . C 3 HOH A 79 1679 27 HOH HOH . C 3 HOH A 80 1680 152 HOH HOH . C 3 HOH A 81 1681 11 HOH HOH . C 3 HOH A 82 1682 69 HOH HOH . C 3 HOH A 83 1683 144 HOH HOH . C 3 HOH A 84 1684 128 HOH HOH . C 3 HOH A 85 1685 113 HOH HOH . C 3 HOH A 86 1686 116 HOH HOH . C 3 HOH A 87 1687 75 HOH HOH . C 3 HOH A 88 1688 71 HOH HOH . C 3 HOH A 89 1689 158 HOH HOH . C 3 HOH A 90 1690 23 HOH HOH . C 3 HOH A 91 1691 19 HOH HOH . C 3 HOH A 92 1692 49 HOH HOH . C 3 HOH A 93 1693 42 HOH HOH . C 3 HOH A 94 1694 63 HOH HOH . C 3 HOH A 95 1695 86 HOH HOH . C 3 HOH A 96 1696 38 HOH HOH . C 3 HOH A 97 1697 48 HOH HOH . C 3 HOH A 98 1698 56 HOH HOH . C 3 HOH A 99 1699 119 HOH HOH . C 3 HOH A 100 1700 88 HOH HOH . C 3 HOH A 101 1701 127 HOH HOH . C 3 HOH A 102 1702 15 HOH HOH . C 3 HOH A 103 1703 108 HOH HOH . C 3 HOH A 104 1704 37 HOH HOH . C 3 HOH A 105 1705 40 HOH HOH . C 3 HOH A 106 1706 19 HOH HOH . C 3 HOH A 107 1707 178 HOH HOH . C 3 HOH A 108 1708 181 HOH HOH . C 3 HOH A 109 1709 92 HOH HOH . C 3 HOH A 110 1710 67 HOH HOH . C 3 HOH A 111 1711 91 HOH HOH . C 3 HOH A 112 1712 90 HOH HOH . C 3 HOH A 113 1713 134 HOH HOH . C 3 HOH A 114 1714 59 HOH HOH . C 3 HOH A 115 1715 43 HOH HOH . C 3 HOH A 116 1716 173 HOH HOH . C 3 HOH A 117 1717 58 HOH HOH . C 3 HOH A 118 1718 2 HOH HOH . C 3 HOH A 119 1719 22 HOH HOH . C 3 HOH A 120 1720 80 HOH HOH . C 3 HOH A 121 1721 132 HOH HOH . C 3 HOH A 122 1722 57 HOH HOH . C 3 HOH A 123 1723 125 HOH HOH . C 3 HOH A 124 1724 122 HOH HOH . C 3 HOH A 125 1725 96 HOH HOH . C 3 HOH A 126 1726 165 HOH HOH . C 3 HOH A 127 1727 175 HOH HOH . C 3 HOH A 128 1728 53 HOH HOH . C 3 HOH A 129 1729 30 HOH HOH . C 3 HOH A 130 1730 136 HOH HOH . C 3 HOH A 131 1731 81 HOH HOH . C 3 HOH A 132 1732 129 HOH HOH . C 3 HOH A 133 1733 146 HOH HOH . C 3 HOH A 134 1734 11 HOH HOH . C 3 HOH A 135 1735 131 HOH HOH . C 3 HOH A 136 1736 95 HOH HOH . C 3 HOH A 137 1737 34 HOH HOH . C 3 HOH A 138 1738 72 HOH HOH . C 3 HOH A 139 1739 29 HOH HOH . C 3 HOH A 140 1740 109 HOH HOH . C 3 HOH A 141 1741 174 HOH HOH . C 3 HOH A 142 1742 26 HOH HOH . C 3 HOH A 143 1743 161 HOH HOH . C 3 HOH A 144 1744 145 HOH HOH . C 3 HOH A 145 1745 117 HOH HOH . C 3 HOH A 146 1746 118 HOH HOH . C 3 HOH A 147 1747 13 HOH HOH . C 3 HOH A 148 1748 126 HOH HOH . C 3 HOH A 149 1749 166 HOH HOH . C 3 HOH A 150 1750 171 HOH HOH . C 3 HOH A 151 1751 143 HOH HOH . C 3 HOH A 152 1752 10 HOH HOH . C 3 HOH A 153 1753 6 HOH HOH . C 3 HOH A 154 1754 153 HOH HOH . C 3 HOH A 155 1755 199 HOH HOH . C 3 HOH A 156 1756 22 HOH HOH . C 3 HOH A 157 1757 164 HOH HOH . C 3 HOH A 158 1758 185 HOH HOH . C 3 HOH A 159 1759 115 HOH HOH . C 3 HOH A 160 1760 8 HOH HOH . C 3 HOH A 161 1761 3 HOH HOH . C 3 HOH A 162 1762 114 HOH HOH . C 3 HOH A 163 1763 194 HOH HOH . C 3 HOH A 164 1764 12 HOH HOH . C 3 HOH A 165 1765 104 HOH HOH . C 3 HOH A 166 1766 18 HOH HOH . C 3 HOH A 167 1767 107 HOH HOH . C 3 HOH A 168 1768 27 HOH HOH . C 3 HOH A 169 1769 186 HOH HOH . C 3 HOH A 170 1770 5 HOH HOH . C 3 HOH A 171 1771 112 HOH HOH . C 3 HOH A 172 1772 170 HOH HOH . C 3 HOH A 173 1773 61 HOH HOH . C 3 HOH A 174 1774 51 HOH HOH . C 3 HOH A 175 1775 16 HOH HOH . C 3 HOH A 176 1776 13 HOH HOH . C 3 HOH A 177 1777 198 HOH HOH . C 3 HOH A 178 1778 41 HOH HOH . C 3 HOH A 179 1779 188 HOH HOH . C 3 HOH A 180 1780 17 HOH HOH . C 3 HOH A 181 1781 15 HOH HOH . C 3 HOH A 182 1782 205 HOH HOH . C 3 HOH A 183 1783 168 HOH HOH . C 3 HOH A 184 1784 28 HOH HOH . C 3 HOH A 185 1785 190 HOH HOH . C 3 HOH A 186 1786 99 HOH HOH . C 3 HOH A 187 1787 46 HOH HOH . C 3 HOH A 188 1788 68 HOH HOH . C 3 HOH A 189 1789 103 HOH HOH . C 3 HOH A 190 1790 110 HOH HOH . C 3 HOH A 191 1791 78 HOH HOH . C 3 HOH A 192 1792 201 HOH HOH . C 3 HOH A 193 1793 102 HOH HOH . C 3 HOH A 194 1794 73 HOH HOH . C 3 HOH A 195 1795 196 HOH HOH . C 3 HOH A 196 1796 149 HOH HOH . C 3 HOH A 197 1797 25 HOH HOH . C 3 HOH A 198 1798 195 HOH HOH . C 3 HOH A 199 1799 93 HOH HOH . C 3 HOH A 200 1800 200 HOH HOH . C 3 HOH A 201 1801 1 HOH HOH . C 3 HOH A 202 1802 9 HOH HOH . C 3 HOH A 203 1803 7 HOH HOH . C 3 HOH A 204 1804 97 HOH HOH . C 3 HOH A 205 1805 4 HOH HOH . C 3 HOH A 206 1806 87 HOH HOH . C 3 HOH A 207 1807 111 HOH HOH . C 3 HOH A 208 1808 30 HOH HOH . C 3 HOH A 209 1809 192 HOH HOH . C 3 HOH A 210 1810 189 HOH HOH . C 3 HOH A 211 1811 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UWV . . . B 2 -18.385 15.758 25.486 0.62 18.98 ? N1 UWV 1501 A 1 HETATM 2 C C4 UWV . . . B 2 -21.494 11.969 25.909 0.62 14.61 ? C4 UWV 1501 A 1 HETATM 3 C C5 UWV . . . B 2 -21.522 12.607 27.17 0.62 14.76 ? C5 UWV 1501 A 1 HETATM 4 C C6 UWV . . . B 2 -19.039 12.772 27.336 0.62 15.53 ? C6 UWV 1501 A 1 HETATM 5 C C7 UWV . . . B 2 -18.708 13.83 26.365 0.62 17.36 ? C7 UWV 1501 A 1 HETATM 6 C C8 UWV . . . B 2 -18.403 13.583 25.037 0.62 18.19 ? C8 UWV 1501 A 1 HETATM 7 N N UWV . . . B 2 -20.382 12.98 27.902 0.62 15.5 ? N UWV 1501 A 1 HETATM 8 C C UWV . . . B 2 -22.773 12.888 27.749 0.62 15.2 ? C UWV 1501 A 1 HETATM 9 C C1 UWV . . . B 2 -23.966 12.568 27.113 0.62 14.66 ? C1 UWV 1501 A 1 HETATM 10 C C2 UWV . . . B 2 -23.916 11.965 25.856 0.62 14.33 ? C2 UWV 1501 A 1 HETATM 11 C C3 UWV . . . B 2 -22.679 11.65 25.255 0.62 14.69 ? C3 UWV 1501 A 1 HETATM 12 C C9 UWV . . . B 2 -18.208 14.829 24.491 0.62 17.92 ? C9 UWV 1501 A 1 HETATM 13 F F UWV . . . B 2 -22.818 13.535 28.928 0.62 16.71 ? F UWV 1501 A 1 HETATM 14 N N2 UWV . . . B 2 -18.708 15.176 26.66 0.62 19.05 ? N2 UWV 1501 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #