data_5RKS # _model_server_result.job_id AiqdATNKLo9TCVGd9VFz7A _model_server_result.datetime_utc '2024-11-14 07:35:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rks # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 5RKS # _exptl.entry_id 5RKS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 239.312 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(diphenylmethyl)azetidin-3-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.93 _cell.angle_gamma 90 _cell.entry_id 5RKS _cell.length_a 81.632 _cell.length_b 27.148 _cell.length_c 55.988 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RKS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H17 N O' _chem_comp.formula_weight 239.312 _chem_comp.id UXG _chem_comp.mon_nstd_flag . _chem_comp.name 1-(diphenylmethyl)azetidin-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C UXG sing 358 n n C C2 UXG sing 359 n n C C1 UXG sing 360 n n C2 N UXG sing 361 n n C1 N UXG sing 362 n n N C3 UXG sing 363 n n C3 C4 UXG sing 364 n n C3 C10 UXG sing 365 n n C5 C4 UXG doub 366 n y C5 C6 UXG sing 367 n y C4 C9 UXG sing 368 n y C6 C7 UXG doub 369 n y C9 C8 UXG doub 370 n y C10 C11 UXG doub 371 n y C10 C15 UXG sing 372 n y C7 C8 UXG sing 373 n y C11 C12 UXG sing 374 n y C15 C14 UXG doub 375 n y C12 C13 UXG doub 376 n y C14 C13 UXG sing 377 n y C5 H1 UXG sing 378 n n C6 H2 UXG sing 379 n n C7 H3 UXG sing 380 n n C8 H4 UXG sing 381 n n C13 H5 UXG sing 382 n n C15 H6 UXG sing 383 n n C H8 UXG sing 384 n n O H9 UXG sing 385 n n C1 H10 UXG sing 386 n n C1 H11 UXG sing 387 n n C11 H12 UXG sing 388 n n C12 H13 UXG sing 389 n n C14 H14 UXG sing 390 n n C2 H15 UXG sing 391 n n C2 H16 UXG sing 392 n n C3 H17 UXG sing 393 n n C9 H18 UXG sing 394 n n # _atom_sites.entry_id 5RKS _atom_sites.fract_transf_matrix[1][1] 0.01225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002145 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036835 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UXG A 1 1501 1501 UXG LIG . C 3 HOH A 1 1601 195 HOH HOH . C 3 HOH A 2 1602 7 HOH HOH . C 3 HOH A 3 1603 89 HOH HOH . C 3 HOH A 4 1604 145 HOH HOH . C 3 HOH A 5 1605 17 HOH HOH . C 3 HOH A 6 1606 183 HOH HOH . C 3 HOH A 7 1607 98 HOH HOH . C 3 HOH A 8 1608 162 HOH HOH . C 3 HOH A 9 1609 144 HOH HOH . C 3 HOH A 10 1610 21 HOH HOH . C 3 HOH A 11 1611 151 HOH HOH . C 3 HOH A 12 1612 33 HOH HOH . C 3 HOH A 13 1613 121 HOH HOH . C 3 HOH A 14 1614 197 HOH HOH . C 3 HOH A 15 1615 187 HOH HOH . C 3 HOH A 16 1616 135 HOH HOH . C 3 HOH A 17 1617 83 HOH HOH . C 3 HOH A 18 1618 141 HOH HOH . C 3 HOH A 19 1619 1 HOH HOH . C 3 HOH A 20 1620 74 HOH HOH . C 3 HOH A 21 1621 10 HOH HOH . C 3 HOH A 22 1622 50 HOH HOH . C 3 HOH A 23 1623 12 HOH HOH . C 3 HOH A 24 1624 20 HOH HOH . C 3 HOH A 25 1625 181 HOH HOH . C 3 HOH A 26 1626 18 HOH HOH . C 3 HOH A 27 1627 154 HOH HOH . C 3 HOH A 28 1628 31 HOH HOH . C 3 HOH A 29 1629 184 HOH HOH . C 3 HOH A 30 1630 172 HOH HOH . C 3 HOH A 31 1631 100 HOH HOH . C 3 HOH A 32 1632 208 HOH HOH . C 3 HOH A 33 1633 36 HOH HOH . C 3 HOH A 34 1634 65 HOH HOH . C 3 HOH A 35 1635 25 HOH HOH . C 3 HOH A 36 1636 35 HOH HOH . C 3 HOH A 37 1637 176 HOH HOH . C 3 HOH A 38 1638 76 HOH HOH . C 3 HOH A 39 1639 4 HOH HOH . C 3 HOH A 40 1640 182 HOH HOH . C 3 HOH A 41 1641 167 HOH HOH . C 3 HOH A 42 1642 179 HOH HOH . C 3 HOH A 43 1643 60 HOH HOH . C 3 HOH A 44 1644 159 HOH HOH . C 3 HOH A 45 1645 70 HOH HOH . C 3 HOH A 46 1646 11 HOH HOH . C 3 HOH A 47 1647 77 HOH HOH . C 3 HOH A 48 1648 152 HOH HOH . C 3 HOH A 49 1649 1 HOH HOH . C 3 HOH A 50 1650 9 HOH HOH . C 3 HOH A 51 1651 84 HOH HOH . C 3 HOH A 52 1652 129 HOH HOH . C 3 HOH A 53 1653 66 HOH HOH . C 3 HOH A 54 1654 16 HOH HOH . C 3 HOH A 55 1655 39 HOH HOH . C 3 HOH A 56 1656 147 HOH HOH . C 3 HOH A 57 1657 21 HOH HOH . C 3 HOH A 58 1658 119 HOH HOH . C 3 HOH A 59 1659 75 HOH HOH . C 3 HOH A 60 1660 19 HOH HOH . C 3 HOH A 61 1661 161 HOH HOH . C 3 HOH A 62 1662 59 HOH HOH . C 3 HOH A 63 1663 157 HOH HOH . C 3 HOH A 64 1664 14 HOH HOH . C 3 HOH A 65 1665 62 HOH HOH . C 3 HOH A 66 1666 142 HOH HOH . C 3 HOH A 67 1667 139 HOH HOH . C 3 HOH A 68 1668 54 HOH HOH . C 3 HOH A 69 1669 55 HOH HOH . C 3 HOH A 70 1670 123 HOH HOH . C 3 HOH A 71 1671 3 HOH HOH . C 3 HOH A 72 1672 160 HOH HOH . C 3 HOH A 73 1673 18 HOH HOH . C 3 HOH A 74 1674 6 HOH HOH . C 3 HOH A 75 1675 45 HOH HOH . C 3 HOH A 76 1676 180 HOH HOH . C 3 HOH A 77 1677 130 HOH HOH . C 3 HOH A 78 1678 5 HOH HOH . C 3 HOH A 79 1679 94 HOH HOH . C 3 HOH A 80 1680 52 HOH HOH . C 3 HOH A 81 1681 122 HOH HOH . C 3 HOH A 82 1682 82 HOH HOH . C 3 HOH A 83 1683 105 HOH HOH . C 3 HOH A 84 1684 27 HOH HOH . C 3 HOH A 85 1685 101 HOH HOH . C 3 HOH A 86 1686 43 HOH HOH . C 3 HOH A 87 1687 28 HOH HOH . C 3 HOH A 88 1688 56 HOH HOH . C 3 HOH A 89 1689 174 HOH HOH . C 3 HOH A 90 1690 64 HOH HOH . C 3 HOH A 91 1691 128 HOH HOH . C 3 HOH A 92 1692 26 HOH HOH . C 3 HOH A 93 1693 23 HOH HOH . C 3 HOH A 94 1694 91 HOH HOH . C 3 HOH A 95 1695 19 HOH HOH . C 3 HOH A 96 1696 209 HOH HOH . C 3 HOH A 97 1697 42 HOH HOH . C 3 HOH A 98 1698 63 HOH HOH . C 3 HOH A 99 1699 40 HOH HOH . C 3 HOH A 100 1700 137 HOH HOH . C 3 HOH A 101 1701 58 HOH HOH . C 3 HOH A 102 1702 88 HOH HOH . C 3 HOH A 103 1703 113 HOH HOH . C 3 HOH A 104 1704 177 HOH HOH . C 3 HOH A 105 1705 207 HOH HOH . C 3 HOH A 106 1706 71 HOH HOH . C 3 HOH A 107 1707 80 HOH HOH . C 3 HOH A 108 1708 29 HOH HOH . C 3 HOH A 109 1709 178 HOH HOH . C 3 HOH A 110 1710 67 HOH HOH . C 3 HOH A 111 1711 140 HOH HOH . C 3 HOH A 112 1712 86 HOH HOH . C 3 HOH A 113 1713 132 HOH HOH . C 3 HOH A 114 1714 15 HOH HOH . C 3 HOH A 115 1715 127 HOH HOH . C 3 HOH A 116 1716 90 HOH HOH . C 3 HOH A 117 1717 191 HOH HOH . C 3 HOH A 118 1718 37 HOH HOH . C 3 HOH A 119 1719 3 HOH HOH . C 3 HOH A 120 1720 48 HOH HOH . C 3 HOH A 121 1721 116 HOH HOH . C 3 HOH A 122 1722 81 HOH HOH . C 3 HOH A 123 1723 44 HOH HOH . C 3 HOH A 124 1724 11 HOH HOH . C 3 HOH A 125 1725 72 HOH HOH . C 3 HOH A 126 1726 96 HOH HOH . C 3 HOH A 127 1727 38 HOH HOH . C 3 HOH A 128 1728 131 HOH HOH . C 3 HOH A 129 1729 10 HOH HOH . C 3 HOH A 130 1730 32 HOH HOH . C 3 HOH A 131 1731 117 HOH HOH . C 3 HOH A 132 1732 163 HOH HOH . C 3 HOH A 133 1733 53 HOH HOH . C 3 HOH A 134 1734 92 HOH HOH . C 3 HOH A 135 1735 125 HOH HOH . C 3 HOH A 136 1736 171 HOH HOH . C 3 HOH A 137 1737 2 HOH HOH . C 3 HOH A 138 1738 49 HOH HOH . C 3 HOH A 139 1739 57 HOH HOH . C 3 HOH A 140 1740 136 HOH HOH . C 3 HOH A 141 1741 22 HOH HOH . C 3 HOH A 142 1742 143 HOH HOH . C 3 HOH A 143 1743 109 HOH HOH . C 3 HOH A 144 1744 34 HOH HOH . C 3 HOH A 145 1745 120 HOH HOH . C 3 HOH A 146 1746 24 HOH HOH . C 3 HOH A 147 1747 13 HOH HOH . C 3 HOH A 148 1748 47 HOH HOH . C 3 HOH A 149 1749 7 HOH HOH . C 3 HOH A 150 1750 165 HOH HOH . C 3 HOH A 151 1751 118 HOH HOH . C 3 HOH A 152 1752 175 HOH HOH . C 3 HOH A 153 1753 173 HOH HOH . C 3 HOH A 154 1754 95 HOH HOH . C 3 HOH A 155 1755 150 HOH HOH . C 3 HOH A 156 1756 146 HOH HOH . C 3 HOH A 157 1757 28 HOH HOH . C 3 HOH A 158 1758 166 HOH HOH . C 3 HOH A 159 1759 194 HOH HOH . C 3 HOH A 160 1760 153 HOH HOH . C 3 HOH A 161 1761 133 HOH HOH . C 3 HOH A 162 1762 199 HOH HOH . C 3 HOH A 163 1763 27 HOH HOH . C 3 HOH A 164 1764 126 HOH HOH . C 3 HOH A 165 1765 185 HOH HOH . C 3 HOH A 166 1766 32 HOH HOH . C 3 HOH A 167 1767 115 HOH HOH . C 3 HOH A 168 1768 22 HOH HOH . C 3 HOH A 169 1769 8 HOH HOH . C 3 HOH A 170 1770 204 HOH HOH . C 3 HOH A 171 1771 114 HOH HOH . C 3 HOH A 172 1772 30 HOH HOH . C 3 HOH A 173 1773 112 HOH HOH . C 3 HOH A 174 1774 31 HOH HOH . C 3 HOH A 175 1775 107 HOH HOH . C 3 HOH A 176 1776 34 HOH HOH . C 3 HOH A 177 1777 61 HOH HOH . C 3 HOH A 178 1778 188 HOH HOH . C 3 HOH A 179 1779 198 HOH HOH . C 3 HOH A 180 1780 190 HOH HOH . C 3 HOH A 181 1781 104 HOH HOH . C 3 HOH A 182 1782 51 HOH HOH . C 3 HOH A 183 1783 6 HOH HOH . C 3 HOH A 184 1784 9 HOH HOH . C 3 HOH A 185 1785 186 HOH HOH . C 3 HOH A 186 1786 14 HOH HOH . C 3 HOH A 187 1787 170 HOH HOH . C 3 HOH A 188 1788 41 HOH HOH . C 3 HOH A 189 1789 110 HOH HOH . C 3 HOH A 190 1790 12 HOH HOH . C 3 HOH A 191 1791 29 HOH HOH . C 3 HOH A 192 1792 168 HOH HOH . C 3 HOH A 193 1793 193 HOH HOH . C 3 HOH A 194 1794 102 HOH HOH . C 3 HOH A 195 1795 206 HOH HOH . C 3 HOH A 196 1796 78 HOH HOH . C 3 HOH A 197 1797 16 HOH HOH . C 3 HOH A 198 1798 8 HOH HOH . C 3 HOH A 199 1799 68 HOH HOH . C 3 HOH A 200 1800 20 HOH HOH . C 3 HOH A 201 1801 4 HOH HOH . C 3 HOH A 202 1802 210 HOH HOH . C 3 HOH A 203 1803 156 HOH HOH . C 3 HOH A 204 1804 2 HOH HOH . C 3 HOH A 205 1805 46 HOH HOH . C 3 HOH A 206 1806 25 HOH HOH . C 3 HOH A 207 1807 103 HOH HOH . C 3 HOH A 208 1808 205 HOH HOH . C 3 HOH A 209 1809 99 HOH HOH . C 3 HOH A 210 1810 201 HOH HOH . C 3 HOH A 211 1811 192 HOH HOH . C 3 HOH A 212 1812 23 HOH HOH . C 3 HOH A 213 1813 35 HOH HOH . C 3 HOH A 214 1814 148 HOH HOH . C 3 HOH A 215 1815 5 HOH HOH . C 3 HOH A 216 1816 200 HOH HOH . C 3 HOH A 217 1817 33 HOH HOH . C 3 HOH A 218 1818 17 HOH HOH . C 3 HOH A 219 1819 26 HOH HOH . C 3 HOH A 220 1820 111 HOH HOH . C 3 HOH A 221 1821 189 HOH HOH . C 3 HOH A 222 1822 87 HOH HOH . C 3 HOH A 223 1823 15 HOH HOH . C 3 HOH A 224 1824 97 HOH HOH . C 3 HOH A 225 1825 13 HOH HOH . C 3 HOH A 226 1826 79 HOH HOH . C 3 HOH A 227 1827 24 HOH HOH . C 3 HOH A 228 1828 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 UXG . . . B 2 -7.73 3.545 15.949 0.52 26.94 ? C4 UXG 1501 A 1 HETATM 2 C C5 UXG . . . B 2 -9.032 4.046 15.679 0.52 27.13 ? C5 UXG 1501 A 1 HETATM 3 C C6 UXG . . . B 2 -10.154 3.341 16.126 0.52 27.42 ? C6 UXG 1501 A 1 HETATM 4 C C7 UXG . . . B 2 -9.985 2.149 16.846 0.52 27.36 ? C7 UXG 1501 A 1 HETATM 5 C C8 UXG . . . B 2 -8.701 1.65 17.116 0.52 27.36 ? C8 UXG 1501 A 1 HETATM 6 C C10 UXG . . . B 2 -5.839 4.926 16.697 0.52 26.62 ? C10 UXG 1501 A 1 HETATM 7 C C13 UXG . . . B 2 -4.587 6.027 18.948 0.52 26.94 ? C13 UXG 1501 A 1 HETATM 8 C C15 UXG . . . B 2 -6.532 5.858 17.493 0.52 26.67 ? C15 UXG 1501 A 1 HETATM 9 N N UXG . . . B 2 -6.754 5.315 14.407 0.52 25.19 ? N UXG 1501 A 1 HETATM 10 C C UXG . . . B 2 -5.998 5.848 12.452 0.52 24.54 ? C UXG 1501 A 1 HETATM 11 O O UXG . . . B 2 -5.033 5.334 11.586 0.52 23.66 ? O UXG 1501 A 1 HETATM 12 C C1 UXG . . . B 2 -5.508 6.042 13.925 0.52 24.86 ? C1 UXG 1501 A 1 HETATM 13 C C11 UXG . . . B 2 -4.519 4.547 17.03 0.52 26.8 ? C11 UXG 1501 A 1 HETATM 14 C C12 UXG . . . B 2 -3.896 5.101 18.151 0.52 26.96 ? C12 UXG 1501 A 1 HETATM 15 C C14 UXG . . . B 2 -5.899 6.404 18.626 0.52 26.81 ? C14 UXG 1501 A 1 HETATM 16 C C2 UXG . . . B 2 -6.905 4.714 13.012 0.52 24.91 ? C2 UXG 1501 A 1 HETATM 17 C C3 UXG . . . B 2 -6.486 4.29 15.486 0.52 26.17 ? C3 UXG 1501 A 1 HETATM 18 C C9 UXG . . . B 2 -7.575 2.348 16.666 0.52 27.23 ? C9 UXG 1501 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #