data_5RKV # _model_server_result.job_id 8dVGs-zhJf7pImaRsKLS4Q _model_server_result.datetime_utc '2024-11-16 21:31:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rkv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1502}' # _entry.id 5RKV # _exptl.entry_id 5RKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.2 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(4-ethoxyphenyl)ethanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.43 _cell.angle_gamma 90 _cell.entry_id 5RKV _cell.length_a 81.137 _cell.length_b 27.095 _cell.length_c 56.37 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C10 H12 O3' _chem_comp.formula_weight 180.2 _chem_comp.id YI6 _chem_comp.mon_nstd_flag . _chem_comp.name '2-(4-ethoxyphenyl)ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C7 YI6 sing 376 n y C6 C5 YI6 doub 377 n y C13 C12 YI6 doub 378 n y C13 C5 YI6 sing 379 n y C7 C8 YI6 doub 380 n y C12 C8 YI6 sing 381 n y C5 C4 YI6 sing 382 n n C8 O9 YI6 sing 383 n n C2 C4 YI6 sing 384 n n C2 O3 YI6 doub 385 n n C2 O1 YI6 sing 386 n n C11 C10 YI6 sing 387 n n C10 O9 YI6 sing 388 n n C6 H6 YI6 sing 389 n n C7 H7 YI6 sing 390 n n C13 H13 YI6 sing 391 n n C12 H12 YI6 sing 392 n n C4 H41C YI6 sing 393 n n C4 H42C YI6 sing 394 n n O1 H1 YI6 sing 395 n n C11 H111 YI6 sing 396 n n C11 H112 YI6 sing 397 n n C11 H113 YI6 sing 398 n n C10 H101 YI6 sing 399 n n C10 H102 YI6 sing 400 n n # _atom_sites.entry_id 5RKV _atom_sites.fract_transf_matrix[1][1] 0.012325 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002269 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036907 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YI6 A 1 1501 1501 YI6 LIG . C 2 YI6 A 1 1502 1601 YI6 LIG . D 3 HOH A 1 1601 2 HOH HOH . D 3 HOH A 2 1602 195 HOH HOH . D 3 HOH A 3 1603 197 HOH HOH . D 3 HOH A 4 1604 121 HOH HOH . D 3 HOH A 5 1605 183 HOH HOH . D 3 HOH A 6 1606 7 HOH HOH . D 3 HOH A 7 1607 161 HOH HOH . D 3 HOH A 8 1608 47 HOH HOH . D 3 HOH A 9 1609 124 HOH HOH . D 3 HOH A 10 1610 6 HOH HOH . D 3 HOH A 11 1611 33 HOH HOH . D 3 HOH A 12 1612 17 HOH HOH . D 3 HOH A 13 1613 89 HOH HOH . D 3 HOH A 14 1614 10 HOH HOH . D 3 HOH A 15 1615 5 HOH HOH . D 3 HOH A 16 1616 101 HOH HOH . D 3 HOH A 17 1617 59 HOH HOH . D 3 HOH A 18 1618 12 HOH HOH . D 3 HOH A 19 1619 31 HOH HOH . D 3 HOH A 20 1620 83 HOH HOH . D 3 HOH A 21 1621 171 HOH HOH . D 3 HOH A 22 1622 50 HOH HOH . D 3 HOH A 23 1623 30 HOH HOH . D 3 HOH A 24 1624 16 HOH HOH . D 3 HOH A 25 1625 165 HOH HOH . D 3 HOH A 26 1626 1 HOH HOH . D 3 HOH A 27 1627 26 HOH HOH . D 3 HOH A 28 1628 14 HOH HOH . D 3 HOH A 29 1629 74 HOH HOH . D 3 HOH A 30 1630 187 HOH HOH . D 3 HOH A 31 1631 25 HOH HOH . D 3 HOH A 32 1632 43 HOH HOH . D 3 HOH A 33 1633 20 HOH HOH . D 3 HOH A 34 1634 1 HOH HOH . D 3 HOH A 35 1635 160 HOH HOH . D 3 HOH A 36 1636 180 HOH HOH . D 3 HOH A 37 1637 182 HOH HOH . D 3 HOH A 38 1638 120 HOH HOH . D 3 HOH A 39 1639 141 HOH HOH . D 3 HOH A 40 1640 138 HOH HOH . D 3 HOH A 41 1641 85 HOH HOH . D 3 HOH A 42 1642 36 HOH HOH . D 3 HOH A 43 1643 3 HOH HOH . D 3 HOH A 44 1644 9 HOH HOH . D 3 HOH A 45 1645 5 HOH HOH . D 3 HOH A 46 1646 70 HOH HOH . D 3 HOH A 47 1647 54 HOH HOH . D 3 HOH A 48 1648 184 HOH HOH . D 3 HOH A 49 1649 66 HOH HOH . D 3 HOH A 50 1650 130 HOH HOH . D 3 HOH A 51 1651 174 HOH HOH . D 3 HOH A 52 1652 39 HOH HOH . D 3 HOH A 53 1653 60 HOH HOH . D 3 HOH A 54 1654 75 HOH HOH . D 3 HOH A 55 1655 41 HOH HOH . D 3 HOH A 56 1656 157 HOH HOH . D 3 HOH A 57 1657 28 HOH HOH . D 3 HOH A 58 1658 55 HOH HOH . D 3 HOH A 59 1659 18 HOH HOH . D 3 HOH A 60 1660 45 HOH HOH . D 3 HOH A 61 1661 62 HOH HOH . D 3 HOH A 62 1662 128 HOH HOH . D 3 HOH A 63 1663 3 HOH HOH . D 3 HOH A 64 1664 6 HOH HOH . D 3 HOH A 65 1665 82 HOH HOH . D 3 HOH A 66 1666 35 HOH HOH . D 3 HOH A 67 1667 4 HOH HOH . D 3 HOH A 68 1668 91 HOH HOH . D 3 HOH A 69 1669 20 HOH HOH . D 3 HOH A 70 1670 37 HOH HOH . D 3 HOH A 71 1671 21 HOH HOH . D 3 HOH A 72 1672 65 HOH HOH . D 3 HOH A 73 1673 11 HOH HOH . D 3 HOH A 74 1674 27 HOH HOH . D 3 HOH A 75 1675 205 HOH HOH . D 3 HOH A 76 1676 122 HOH HOH . D 3 HOH A 77 1677 113 HOH HOH . D 3 HOH A 78 1678 52 HOH HOH . D 3 HOH A 79 1679 92 HOH HOH . D 3 HOH A 80 1680 77 HOH HOH . D 3 HOH A 81 1681 69 HOH HOH . D 3 HOH A 82 1682 63 HOH HOH . D 3 HOH A 83 1683 181 HOH HOH . D 3 HOH A 84 1684 64 HOH HOH . D 3 HOH A 85 1685 11 HOH HOH . D 3 HOH A 86 1686 139 HOH HOH . D 3 HOH A 87 1687 132 HOH HOH . D 3 HOH A 88 1688 71 HOH HOH . D 3 HOH A 89 1689 163 HOH HOH . D 3 HOH A 90 1690 96 HOH HOH . D 3 HOH A 91 1691 131 HOH HOH . D 3 HOH A 92 1692 42 HOH HOH . D 3 HOH A 93 1693 178 HOH HOH . D 3 HOH A 94 1694 150 HOH HOH . D 3 HOH A 95 1695 67 HOH HOH . D 3 HOH A 96 1696 48 HOH HOH . D 3 HOH A 97 1697 172 HOH HOH . D 3 HOH A 98 1698 38 HOH HOH . D 3 HOH A 99 1699 13 HOH HOH . D 3 HOH A 100 1700 53 HOH HOH . D 3 HOH A 101 1701 32 HOH HOH . D 3 HOH A 102 1702 127 HOH HOH . D 3 HOH A 103 1703 86 HOH HOH . D 3 HOH A 104 1704 204 HOH HOH . D 3 HOH A 105 1705 37 HOH HOH . D 3 HOH A 106 1706 48 HOH HOH . D 3 HOH A 107 1707 146 HOH HOH . D 3 HOH A 108 1708 23 HOH HOH . D 3 HOH A 109 1709 49 HOH HOH . D 3 HOH A 110 1710 56 HOH HOH . D 3 HOH A 111 1711 81 HOH HOH . D 3 HOH A 112 1712 135 HOH HOH . D 3 HOH A 113 1713 40 HOH HOH . D 3 HOH A 114 1714 116 HOH HOH . D 3 HOH A 115 1715 29 HOH HOH . D 3 HOH A 116 1716 19 HOH HOH . D 3 HOH A 117 1717 105 HOH HOH . D 3 HOH A 118 1718 98 HOH HOH . D 3 HOH A 119 1719 152 HOH HOH . D 3 HOH A 120 1720 22 HOH HOH . D 3 HOH A 121 1721 18 HOH HOH . D 3 HOH A 122 1722 15 HOH HOH . D 3 HOH A 123 1723 93 HOH HOH . D 3 HOH A 124 1724 80 HOH HOH . D 3 HOH A 125 1725 119 HOH HOH . D 3 HOH A 126 1726 137 HOH HOH . D 3 HOH A 127 1727 136 HOH HOH . D 3 HOH A 128 1728 145 HOH HOH . D 3 HOH A 129 1729 58 HOH HOH . D 3 HOH A 130 1730 76 HOH HOH . D 3 HOH A 131 1731 72 HOH HOH . D 3 HOH A 132 1732 13 HOH HOH . D 3 HOH A 133 1733 90 HOH HOH . D 3 HOH A 134 1734 134 HOH HOH . D 3 HOH A 135 1735 57 HOH HOH . D 3 HOH A 136 1736 126 HOH HOH . D 3 HOH A 137 1737 4 HOH HOH . D 3 HOH A 138 1738 125 HOH HOH . D 3 HOH A 139 1739 38 HOH HOH . D 3 HOH A 140 1740 117 HOH HOH . D 3 HOH A 141 1741 108 HOH HOH . D 3 HOH A 142 1742 118 HOH HOH . D 3 HOH A 143 1743 19 HOH HOH . D 3 HOH A 144 1744 109 HOH HOH . D 3 HOH A 145 1745 29 HOH HOH . D 3 HOH A 146 1746 191 HOH HOH . D 3 HOH A 147 1747 24 HOH HOH . D 3 HOH A 148 1748 123 HOH HOH . D 3 HOH A 149 1749 7 HOH HOH . D 3 HOH A 150 1750 34 HOH HOH . D 3 HOH A 151 1751 177 HOH HOH . D 3 HOH A 152 1752 44 HOH HOH . D 3 HOH A 153 1753 84 HOH HOH . D 3 HOH A 154 1754 51 HOH HOH . D 3 HOH A 155 1755 14 HOH HOH . D 3 HOH A 156 1756 95 HOH HOH . D 3 HOH A 157 1757 149 HOH HOH . D 3 HOH A 158 1758 32 HOH HOH . D 3 HOH A 159 1759 22 HOH HOH . D 3 HOH A 160 1760 175 HOH HOH . D 3 HOH A 161 1761 30 HOH HOH . D 3 HOH A 162 1762 115 HOH HOH . D 3 HOH A 163 1763 39 HOH HOH . D 3 HOH A 164 1764 166 HOH HOH . D 3 HOH A 165 1765 114 HOH HOH . D 3 HOH A 166 1766 104 HOH HOH . D 3 HOH A 167 1767 16 HOH HOH . D 3 HOH A 168 1768 8 HOH HOH . D 3 HOH A 169 1769 21 HOH HOH . D 3 HOH A 170 1770 185 HOH HOH . D 3 HOH A 171 1771 164 HOH HOH . D 3 HOH A 172 1772 26 HOH HOH . D 3 HOH A 173 1773 112 HOH HOH . D 3 HOH A 174 1774 8 HOH HOH . D 3 HOH A 175 1775 202 HOH HOH . D 3 HOH A 176 1776 199 HOH HOH . D 3 HOH A 177 1777 46 HOH HOH . D 3 HOH A 178 1778 23 HOH HOH . D 3 HOH A 179 1779 198 HOH HOH . D 3 HOH A 180 1780 186 HOH HOH . D 3 HOH A 181 1781 133 HOH HOH . D 3 HOH A 182 1782 193 HOH HOH . D 3 HOH A 183 1783 50 HOH HOH . D 3 HOH A 184 1784 170 HOH HOH . D 3 HOH A 185 1785 110 HOH HOH . D 3 HOH A 186 1786 42 HOH HOH . D 3 HOH A 187 1787 190 HOH HOH . D 3 HOH A 188 1788 188 HOH HOH . D 3 HOH A 189 1789 51 HOH HOH . D 3 HOH A 190 1790 49 HOH HOH . D 3 HOH A 191 1791 45 HOH HOH . D 3 HOH A 192 1792 27 HOH HOH . D 3 HOH A 193 1793 12 HOH HOH . D 3 HOH A 194 1794 99 HOH HOH . D 3 HOH A 195 1795 100 HOH HOH . D 3 HOH A 196 1796 17 HOH HOH . D 3 HOH A 197 1797 103 HOH HOH . D 3 HOH A 198 1798 52 HOH HOH . D 3 HOH A 199 1799 46 HOH HOH . D 3 HOH A 200 1800 73 HOH HOH . D 3 HOH A 201 1801 33 HOH HOH . D 3 HOH A 202 1802 129 HOH HOH . D 3 HOH A 203 1803 68 HOH HOH . D 3 HOH A 204 1804 156 HOH HOH . D 3 HOH A 205 1805 102 HOH HOH . D 3 HOH A 206 1806 61 HOH HOH . D 3 HOH A 207 1807 15 HOH HOH . D 3 HOH A 208 1808 201 HOH HOH . D 3 HOH A 209 1809 41 HOH HOH . D 3 HOH A 210 1810 31 HOH HOH . D 3 HOH A 211 1811 2 HOH HOH . D 3 HOH A 212 1812 9 HOH HOH . D 3 HOH A 213 1813 34 HOH HOH . D 3 HOH A 214 1814 189 HOH HOH . D 3 HOH A 215 1815 10 HOH HOH . D 3 HOH A 216 1816 47 HOH HOH . D 3 HOH A 217 1817 78 HOH HOH . D 3 HOH A 218 1818 111 HOH HOH . D 3 HOH A 219 1819 28 HOH HOH . D 3 HOH A 220 1820 24 HOH HOH . D 3 HOH A 221 1821 97 HOH HOH . D 3 HOH A 222 1822 87 HOH HOH . D 3 HOH A 223 1823 192 HOH HOH . D 3 HOH A 224 1824 148 HOH HOH . D 3 HOH A 225 1825 36 HOH HOH . D 3 HOH A 226 1826 35 HOH HOH . D 3 HOH A 227 1827 43 HOH HOH . D 3 HOH A 228 1828 40 HOH HOH . D 3 HOH A 229 1829 79 HOH HOH . D 3 HOH A 230 1830 25 HOH HOH . D 3 HOH A 231 1831 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 YI6 . . . C 2 -21.222 12.213 25.341 1 26.97 ? C12 YI6 1502 A 1 HETATM 2 C C13 YI6 . . . C 2 -22.445 12.042 25.953 1 27.51 ? C13 YI6 1502 A 1 HETATM 3 C C5 YI6 . . . C 2 -22.657 12.552 27.226 1 28.03 ? C5 YI6 1502 A 1 HETATM 4 C C6 YI6 . . . C 2 -21.709 13.311 27.899 1 27.09 ? C6 YI6 1502 A 1 HETATM 5 C C7 YI6 . . . C 2 -20.471 13.505 27.332 1 26.34 ? C7 YI6 1502 A 1 HETATM 6 C C8 YI6 . . . C 2 -20.24 12.923 26.055 1 26.25 ? C8 YI6 1502 A 1 HETATM 7 C C2 YI6 . . . C 2 -24.548 13.255 28.553 1 30.93 ? C2 YI6 1502 A 1 HETATM 8 O O9 YI6 . . . C 2 -19.015 12.923 25.469 1 25.4 ? O9 YI6 1502 A 1 HETATM 9 C C10 YI6 . . . C 2 -18.169 13.996 25.81 1 25.76 ? C10 YI6 1502 A 1 HETATM 10 C C11 YI6 . . . C 2 -17.901 14.579 24.433 1 25.79 ? C11 YI6 1502 A 1 HETATM 11 O O1 YI6 . . . C 2 -24.196 13.544 29.817 1 31.91 ? O1 YI6 1502 A 1 HETATM 12 O O3 YI6 . . . C 2 -25.403 13.898 28.045 1 31.8 ? O3 YI6 1502 A 1 HETATM 13 C C4 YI6 . . . C 2 -23.86 12.102 27.935 1 29.69 ? C4 YI6 1502 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #