data_5RPO # _model_server_result.job_id a0ddc0wxV4eqXe7mCVbOZw _model_server_result.datetime_utc '2024-11-18 07:46:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rpo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5RPO # _exptl.entry_id 5RPO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5RPO _cell.length_a 67.43 _cell.length_b 67.43 _cell.length_c 104.68 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RPO _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 34 A CYS 34 1_555 A SG CYS 123 A CYS 123 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 178 A CYS 178 1_555 A SG CYS 249 A CYS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5RPO _atom_sites.fract_transf_matrix[1][1] 0.01483 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1001 1001 SO4 SO4 . C 3 HOH A 1 1101 66 HOH HOH . C 3 HOH A 2 1102 24 HOH HOH . C 3 HOH A 3 1103 40 HOH HOH . C 3 HOH A 4 1104 47 HOH HOH . C 3 HOH A 5 1105 30 HOH HOH . C 3 HOH A 6 1106 10 HOH HOH . C 3 HOH A 7 1107 63 HOH HOH . C 3 HOH A 8 1108 39 HOH HOH . C 3 HOH A 9 1109 74 HOH HOH . C 3 HOH A 10 1110 50 HOH HOH . C 3 HOH A 11 1111 69 HOH HOH . C 3 HOH A 12 1112 60 HOH HOH . C 3 HOH A 13 1113 58 HOH HOH . C 3 HOH A 14 1114 9 HOH HOH . C 3 HOH A 15 1115 51 HOH HOH . C 3 HOH A 16 1116 27 HOH HOH . C 3 HOH A 17 1117 7 HOH HOH . C 3 HOH A 18 1118 1 HOH HOH . C 3 HOH A 19 1119 76 HOH HOH . C 3 HOH A 20 1120 6 HOH HOH . C 3 HOH A 21 1121 70 HOH HOH . C 3 HOH A 22 1122 38 HOH HOH . C 3 HOH A 23 1123 3 HOH HOH . C 3 HOH A 24 1124 75 HOH HOH . C 3 HOH A 25 1125 13 HOH HOH . C 3 HOH A 26 1126 26 HOH HOH . C 3 HOH A 27 1127 46 HOH HOH . C 3 HOH A 28 1128 8 HOH HOH . C 3 HOH A 29 1129 17 HOH HOH . C 3 HOH A 30 1130 22 HOH HOH . C 3 HOH A 31 1131 62 HOH HOH . C 3 HOH A 32 1132 32 HOH HOH . C 3 HOH A 33 1133 55 HOH HOH . C 3 HOH A 34 1134 49 HOH HOH . C 3 HOH A 35 1135 12 HOH HOH . C 3 HOH A 36 1136 29 HOH HOH . C 3 HOH A 37 1137 35 HOH HOH . C 3 HOH A 38 1138 2 HOH HOH . C 3 HOH A 39 1139 18 HOH HOH . C 3 HOH A 40 1140 83 HOH HOH . C 3 HOH A 41 1141 4 HOH HOH . C 3 HOH A 42 1142 28 HOH HOH . C 3 HOH A 43 1143 56 HOH HOH . C 3 HOH A 44 1144 16 HOH HOH . C 3 HOH A 45 1145 23 HOH HOH . C 3 HOH A 46 1146 31 HOH HOH . C 3 HOH A 47 1147 21 HOH HOH . C 3 HOH A 48 1148 14 HOH HOH . C 3 HOH A 49 1149 33 HOH HOH . C 3 HOH A 50 1150 36 HOH HOH . C 3 HOH A 51 1151 41 HOH HOH . C 3 HOH A 52 1152 37 HOH HOH . C 3 HOH A 53 1153 25 HOH HOH . C 3 HOH A 54 1154 11 HOH HOH . C 3 HOH A 55 1155 73 HOH HOH . C 3 HOH A 56 1156 44 HOH HOH . C 3 HOH A 57 1157 77 HOH HOH . C 3 HOH A 58 1158 15 HOH HOH . C 3 HOH A 59 1159 34 HOH HOH . C 3 HOH A 60 1160 81 HOH HOH . C 3 HOH A 61 1161 5 HOH HOH . C 3 HOH A 62 1162 45 HOH HOH . C 3 HOH A 63 1163 67 HOH HOH . C 3 HOH A 64 1164 20 HOH HOH . C 3 HOH A 65 1165 19 HOH HOH . C 3 HOH A 66 1166 57 HOH HOH . C 3 HOH A 67 1167 42 HOH HOH . C 3 HOH A 68 1168 48 HOH HOH . C 3 HOH A 69 1169 54 HOH HOH . C 3 HOH A 70 1170 72 HOH HOH . C 3 HOH A 71 1171 82 HOH HOH . C 3 HOH A 72 1172 43 HOH HOH . C 3 HOH A 73 1173 78 HOH HOH . C 3 HOH A 74 1174 65 HOH HOH . C 3 HOH A 75 1175 61 HOH HOH . C 3 HOH A 76 1176 84 HOH HOH . C 3 HOH A 77 1177 71 HOH HOH . C 3 HOH A 78 1178 59 HOH HOH . C 3 HOH A 79 1179 64 HOH HOH . C 3 HOH A 80 1180 53 HOH HOH . C 3 HOH A 81 1181 79 HOH HOH . C 3 HOH A 82 1182 80 HOH HOH . C 3 HOH A 83 1183 68 HOH HOH . C 3 HOH A 84 1184 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 60.415 60.66 27.692 1 23.34 ? S SO4 1001 A 1 HETATM 2 O O1 SO4 . . . B 2 60.034 60.557 29.096 1 23.05 ? O1 SO4 1001 A 1 HETATM 3 O O2 SO4 . . . B 2 61.806 60.245 27.526 1 22.74 ? O2 SO4 1001 A 1 HETATM 4 O O3 SO4 . . . B 2 59.577 59.742 26.924 1 22.13 ? O3 SO4 1001 A 1 HETATM 5 O O4 SO4 . . . B 2 60.228 62.021 27.167 1 20.4 ? O4 SO4 1001 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 479 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 5 #