data_5RVS # _model_server_result.job_id Dsu7xWeShB7ImMVXHtYCiQ _model_server_result.datetime_utc '2024-10-18 06:18:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rvs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5RVS # _exptl.entry_id 5RVS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 199.205 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-phenylpyridine-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.71 _cell.angle_gamma 90 _cell.entry_id 5RVS _cell.length_a 132.44 _cell.length_b 29.88 _cell.length_c 37.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RVS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H9 N O2' _chem_comp.formula_weight 199.205 _chem_comp.id 0LO _chem_comp.mon_nstd_flag . _chem_comp.name '5-phenylpyridine-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CAE 0LO doub 1 n y CAC CAD 0LO sing 2 n y CAE CAG 0LO sing 3 n y CAD CAF 0LO doub 4 n y CAG CAN 0LO doub 5 n y CAF CAN 0LO sing 6 n y CAN CAO 0LO sing 7 n n CAO CAJ 0LO doub 8 n y CAO CAI 0LO sing 9 n y CAJ CAM 0LO sing 10 n y CAI NAK 0LO doub 11 n y CAM CAL 0LO sing 12 n n CAM CAH 0LO doub 13 n y OAA CAL 0LO doub 14 n n NAK CAH 0LO sing 15 n y CAL OAB 0LO sing 16 n n CAF H1 0LO sing 17 n n CAD H2 0LO sing 18 n n CAC H3 0LO sing 19 n n CAE H4 0LO sing 20 n n CAG H5 0LO sing 21 n n CAJ H6 0LO sing 22 n n CAI H7 0LO sing 23 n n CAH H8 0LO sing 24 n n OAB H9 0LO sing 25 n n # _atom_sites.entry_id 5RVS _atom_sites.fract_transf_matrix[1][1] 0.007551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001157 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0LO A 1 201 201 0LO LIG . C 3 HOH A 1 301 69 HOH HOH . C 3 HOH A 2 302 72 HOH HOH . C 3 HOH A 3 303 74 HOH HOH . C 3 HOH A 4 304 136 HOH HOH . C 3 HOH A 5 305 23 HOH HOH . C 3 HOH A 6 306 133 HOH HOH . C 3 HOH A 7 307 62 HOH HOH . C 3 HOH A 8 308 52 HOH HOH . C 3 HOH A 9 309 83 HOH HOH . C 3 HOH A 10 310 38 HOH HOH . C 3 HOH A 11 311 117 HOH HOH . C 3 HOH A 12 312 111 HOH HOH . C 3 HOH A 13 313 32 HOH HOH . C 3 HOH A 14 314 150 HOH HOH . C 3 HOH A 15 315 37 HOH HOH . C 3 HOH A 16 316 6 HOH HOH . C 3 HOH A 17 317 141 HOH HOH . C 3 HOH A 18 318 63 HOH HOH . C 3 HOH A 19 319 119 HOH HOH . C 3 HOH A 20 320 30 HOH HOH . C 3 HOH A 21 321 87 HOH HOH . C 3 HOH A 22 322 86 HOH HOH . C 3 HOH A 23 323 24 HOH HOH . C 3 HOH A 24 324 35 HOH HOH . C 3 HOH A 25 325 98 HOH HOH . C 3 HOH A 26 326 123 HOH HOH . C 3 HOH A 27 327 29 HOH HOH . C 3 HOH A 28 328 134 HOH HOH . C 3 HOH A 29 329 151 HOH HOH . C 3 HOH A 30 330 14 HOH HOH . C 3 HOH A 31 331 48 HOH HOH . C 3 HOH A 32 332 138 HOH HOH . C 3 HOH A 33 333 82 HOH HOH . C 3 HOH A 34 334 50 HOH HOH . C 3 HOH A 35 335 96 HOH HOH . C 3 HOH A 36 336 9 HOH HOH . C 3 HOH A 37 337 2 HOH HOH . C 3 HOH A 38 338 124 HOH HOH . C 3 HOH A 39 339 46 HOH HOH . C 3 HOH A 40 340 1 HOH HOH . C 3 HOH A 41 341 114 HOH HOH . C 3 HOH A 42 342 5 HOH HOH . C 3 HOH A 43 343 7 HOH HOH . C 3 HOH A 44 344 40 HOH HOH . C 3 HOH A 45 345 44 HOH HOH . C 3 HOH A 46 346 75 HOH HOH . C 3 HOH A 47 347 81 HOH HOH . C 3 HOH A 48 348 41 HOH HOH . C 3 HOH A 49 349 25 HOH HOH . C 3 HOH A 50 350 131 HOH HOH . C 3 HOH A 51 351 61 HOH HOH . C 3 HOH A 52 352 142 HOH HOH . C 3 HOH A 53 353 126 HOH HOH . C 3 HOH A 54 354 17 HOH HOH . C 3 HOH A 55 355 21 HOH HOH . C 3 HOH A 56 356 147 HOH HOH . C 3 HOH A 57 357 90 HOH HOH . C 3 HOH A 58 358 79 HOH HOH . C 3 HOH A 59 359 99 HOH HOH . C 3 HOH A 60 360 92 HOH HOH . C 3 HOH A 61 361 76 HOH HOH . C 3 HOH A 62 362 60 HOH HOH . C 3 HOH A 63 363 31 HOH HOH . C 3 HOH A 64 364 20 HOH HOH . C 3 HOH A 65 365 28 HOH HOH . C 3 HOH A 66 366 8 HOH HOH . C 3 HOH A 67 367 146 HOH HOH . C 3 HOH A 68 368 27 HOH HOH . C 3 HOH A 69 369 95 HOH HOH . C 3 HOH A 70 370 15 HOH HOH . C 3 HOH A 71 371 84 HOH HOH . C 3 HOH A 72 372 106 HOH HOH . C 3 HOH A 73 373 3 HOH HOH . C 3 HOH A 74 374 93 HOH HOH . C 3 HOH A 75 375 59 HOH HOH . C 3 HOH A 76 376 97 HOH HOH . C 3 HOH A 77 377 16 HOH HOH . C 3 HOH A 78 378 47 HOH HOH . C 3 HOH A 79 379 65 HOH HOH . C 3 HOH A 80 380 34 HOH HOH . C 3 HOH A 81 381 64 HOH HOH . C 3 HOH A 82 382 4 HOH HOH . C 3 HOH A 83 383 53 HOH HOH . C 3 HOH A 84 384 33 HOH HOH . C 3 HOH A 85 385 129 HOH HOH . C 3 HOH A 86 386 108 HOH HOH . C 3 HOH A 87 387 51 HOH HOH . C 3 HOH A 88 388 91 HOH HOH . C 3 HOH A 89 389 110 HOH HOH . C 3 HOH A 90 390 113 HOH HOH . C 3 HOH A 91 391 22 HOH HOH . C 3 HOH A 92 392 13 HOH HOH . C 3 HOH A 93 393 85 HOH HOH . C 3 HOH A 94 394 66 HOH HOH . C 3 HOH A 95 395 18 HOH HOH . C 3 HOH A 96 396 11 HOH HOH . C 3 HOH A 97 397 12 HOH HOH . C 3 HOH A 98 398 116 HOH HOH . C 3 HOH A 99 399 73 HOH HOH . C 3 HOH A 100 400 135 HOH HOH . C 3 HOH A 101 401 127 HOH HOH . C 3 HOH A 102 402 43 HOH HOH . C 3 HOH A 103 403 57 HOH HOH . C 3 HOH A 104 404 88 HOH HOH . C 3 HOH A 105 405 128 HOH HOH . C 3 HOH A 106 406 143 HOH HOH . C 3 HOH A 107 407 103 HOH HOH . C 3 HOH A 108 408 101 HOH HOH . C 3 HOH A 109 409 56 HOH HOH . C 3 HOH A 110 410 68 HOH HOH . C 3 HOH A 111 411 10 HOH HOH . C 3 HOH A 112 412 58 HOH HOH . C 3 HOH A 113 413 122 HOH HOH . C 3 HOH A 114 414 42 HOH HOH . C 3 HOH A 115 415 125 HOH HOH . C 3 HOH A 116 416 49 HOH HOH . C 3 HOH A 117 417 36 HOH HOH . C 3 HOH A 118 418 45 HOH HOH . C 3 HOH A 119 419 105 HOH HOH . C 3 HOH A 120 420 120 HOH HOH . C 3 HOH A 121 421 148 HOH HOH . C 3 HOH A 122 422 55 HOH HOH . C 3 HOH A 123 423 121 HOH HOH . C 3 HOH A 124 424 102 HOH HOH . C 3 HOH A 125 425 112 HOH HOH . C 3 HOH A 126 426 104 HOH HOH . C 3 HOH A 127 427 139 HOH HOH . C 3 HOH A 128 428 78 HOH HOH . C 3 HOH A 129 429 100 HOH HOH . C 3 HOH A 130 430 19 HOH HOH . C 3 HOH A 131 431 137 HOH HOH . C 3 HOH A 132 432 145 HOH HOH . C 3 HOH A 133 433 89 HOH HOH . C 3 HOH A 134 434 132 HOH HOH . C 3 HOH A 135 435 80 HOH HOH . C 3 HOH A 136 436 94 HOH HOH . C 3 HOH A 137 437 109 HOH HOH . C 3 HOH A 138 438 107 HOH HOH . C 3 HOH A 139 439 115 HOH HOH . C 3 HOH A 140 440 71 HOH HOH . C 3 HOH A 141 441 130 HOH HOH . C 3 HOH A 142 442 70 HOH HOH . C 3 HOH A 143 443 67 HOH HOH . C 3 HOH A 144 444 118 HOH HOH . C 3 HOH A 145 445 26 HOH HOH . C 3 HOH A 146 446 39 HOH HOH . C 3 HOH A 147 447 144 HOH HOH . C 3 HOH A 148 448 140 HOH HOH . C 3 HOH A 149 449 149 HOH HOH . C 3 HOH A 150 450 54 HOH HOH . C 3 HOH A 151 451 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAF 0LO . . . B 2 9.634 5.717 17.435 0.82 40.55 ? CAF 0LO 201 A 1 HETATM 2 C CAD 0LO . . . B 2 8.959 6.831 17.891 0.82 42.35 ? CAD 0LO 201 A 1 HETATM 3 C CAC 0LO . . . B 2 8.002 6.705 18.872 0.82 44.22 ? CAC 0LO 201 A 1 HETATM 4 C CAE 0LO . . . B 2 7.722 5.461 19.403 0.82 43.11 ? CAE 0LO 201 A 1 HETATM 5 C CAG 0LO . . . B 2 8.389 4.347 18.946 0.82 43.85 ? CAG 0LO 201 A 1 HETATM 6 C CAN 0LO . . . B 2 9.358 4.466 17.958 0.82 43.93 ? CAN 0LO 201 A 1 HETATM 7 C CAO 0LO . . . B 2 10.096 3.223 17.441 0.82 47.37 ? CAO 0LO 201 A 1 HETATM 8 C CAJ 0LO . . . B 2 10.566 2.229 18.289 0.82 45.83 ? CAJ 0LO 201 A 1 HETATM 9 C CAI 0LO . . . B 2 10.294 3.06 16.083 0.82 46.37 ? CAI 0LO 201 A 1 HETATM 10 N NAK 0LO . . . B 2 10.909 2.017 15.586 0.82 45.71 ? NAK 0LO 201 A 1 HETATM 11 C CAH 0LO . . . B 2 11.37 1.074 16.358 0.82 44.7 ? CAH 0LO 201 A 1 HETATM 12 C CAM 0LO . . . B 2 11.222 1.139 17.732 0.82 47.12 ? CAM 0LO 201 A 1 HETATM 13 C CAL 0LO . . . B 2 11.751 0.01 18.62 0.82 52.93 ? CAL 0LO 201 A 1 HETATM 14 O OAB 0LO . . . B 2 11.894 0.178 19.85 0.82 55.84 -1 OAB 0LO 201 A 1 HETATM 15 O OAA 0LO . . . B 2 12.024 -1.105 18.129 0.82 55.4 ? OAA 0LO 201 A 1 HETATM 16 H H1 0LO . . . B 2 10.275 5.807 16.767 0.82 48.66 ? H1 0LO 201 A 1 HETATM 17 H H2 0LO . . . B 2 9.176 7.673 17.56 0.82 50.82 ? H2 0LO 201 A 1 HETATM 18 H H3 0LO . . . B 2 7.635 7.4 19.292 0.82 53.07 ? H3 0LO 201 A 1 HETATM 19 H H4 0LO . . . B 2 7.101 5.38 20.091 0.82 51.73 ? H4 0LO 201 A 1 HETATM 20 H H5 0LO . . . B 2 8.194 3.511 19.305 0.82 52.63 ? H5 0LO 201 A 1 HETATM 21 H H6 0LO . . . B 2 10.45 2.295 19.209 0.82 55 ? H6 0LO 201 A 1 HETATM 22 H H7 0LO . . . B 2 9.984 3.717 15.502 0.82 55.65 ? H7 0LO 201 A 1 HETATM 23 H H8 0LO . . . B 2 11.802 0.343 15.979 0.82 53.65 ? H8 0LO 201 A 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #