data_5RZN
#
_model_server_result.job_id            nK7P2txcWWNcMUejhxqZyA 
_model_server_result.datetime_utc      '2024-11-16 13:54:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5rzn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5RZN 
#
_exptl.entry_id    5RZN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              191.111 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(trifluoromethyl)pyrimidine-5-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5RZN 
_cell.length_a            38.56 
_cell.length_b            77.92 
_cell.length_c            99.73 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5RZN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C6 H4 F3 N3 O' 
_chem_comp.formula_weight    191.111 
_chem_comp.id                S7J 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(trifluoromethyl)pyrimidine-5-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F1 C5 S7J sing 295 n n 
F C5 S7J sing 296 n n 
C5 F2 S7J sing 297 n n 
C5 C3 S7J sing 298 n n 
C3 N1 S7J doub 299 n y 
C3 N2 S7J sing 300 n y 
N1 C2 S7J sing 301 n y 
N2 C4 S7J doub 302 n y 
C2 C1 S7J doub 303 n y 
C4 C1 S7J sing 304 n y 
C1 C S7J sing 305 n n 
C N S7J sing 306 n n 
C O S7J doub 307 n n 
C4 H1 S7J sing 308 n n 
N H2 S7J sing 309 n n 
N H3 S7J sing 310 n n 
C2 H4 S7J sing 311 n n 
#
_atom_sites.entry_id                     5RZN 
_atom_sites.fract_transf_matrix[1][1]    0.025934 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012834 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010027 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 S7J A 1 401 401 S7J LIG . 
C 2 S7J A 1 402 501 S7J LIG . 
D 3 DMS A 1 403 1 DMS DMS . 
E 3 DMS A 1 404 2 DMS DMS . 
F 4 EDO A 1 405 1 EDO EDO . 
G 4 EDO A 1 406 2 EDO EDO . 
H 4 EDO A 1 407 3 EDO EDO . 
I 4 EDO A 1 408 4 EDO EDO . 
J 4 EDO A 1 409 5 EDO EDO . 
K 4 EDO A 1 410 6 EDO EDO . 
L 5 HOH A 1 501 95 HOH HOH . 
L 5 HOH A 2 502 1 HOH HOH . 
L 5 HOH A 3 503 127 HOH HOH . 
L 5 HOH A 4 504 113 HOH HOH . 
L 5 HOH A 5 505 104 HOH HOH . 
L 5 HOH A 6 506 9 HOH HOH . 
L 5 HOH A 7 507 124 HOH HOH . 
L 5 HOH A 8 508 63 HOH HOH . 
L 5 HOH A 9 509 28 HOH HOH . 
L 5 HOH A 10 510 96 HOH HOH . 
L 5 HOH A 11 511 97 HOH HOH . 
L 5 HOH A 12 512 129 HOH HOH . 
L 5 HOH A 13 513 151 HOH HOH . 
L 5 HOH A 14 514 109 HOH HOH . 
L 5 HOH A 15 515 26 HOH HOH . 
L 5 HOH A 16 516 50 HOH HOH . 
L 5 HOH A 17 517 59 HOH HOH . 
L 5 HOH A 18 518 51 HOH HOH . 
L 5 HOH A 19 519 146 HOH HOH . 
L 5 HOH A 20 520 10 HOH HOH . 
L 5 HOH A 21 521 58 HOH HOH . 
L 5 HOH A 22 522 67 HOH HOH . 
L 5 HOH A 23 523 133 HOH HOH . 
L 5 HOH A 24 524 5 HOH HOH . 
L 5 HOH A 25 525 108 HOH HOH . 
L 5 HOH A 26 526 45 HOH HOH . 
L 5 HOH A 27 527 76 HOH HOH . 
L 5 HOH A 28 528 36 HOH HOH . 
L 5 HOH A 29 529 82 HOH HOH . 
L 5 HOH A 30 530 11 HOH HOH . 
L 5 HOH A 31 531 148 HOH HOH . 
L 5 HOH A 32 532 75 HOH HOH . 
L 5 HOH A 33 533 101 HOH HOH . 
L 5 HOH A 34 534 92 HOH HOH . 
L 5 HOH A 35 535 116 HOH HOH . 
L 5 HOH A 36 536 4 HOH HOH . 
L 5 HOH A 37 537 105 HOH HOH . 
L 5 HOH A 38 538 60 HOH HOH . 
L 5 HOH A 39 539 32 HOH HOH . 
L 5 HOH A 40 540 81 HOH HOH . 
L 5 HOH A 41 541 90 HOH HOH . 
L 5 HOH A 42 542 98 HOH HOH . 
L 5 HOH A 43 543 86 HOH HOH . 
L 5 HOH A 44 544 31 HOH HOH . 
L 5 HOH A 45 545 138 HOH HOH . 
L 5 HOH A 46 546 54 HOH HOH . 
L 5 HOH A 47 547 57 HOH HOH . 
L 5 HOH A 48 548 47 HOH HOH . 
L 5 HOH A 49 549 123 HOH HOH . 
L 5 HOH A 50 550 22 HOH HOH . 
L 5 HOH A 51 551 55 HOH HOH . 
L 5 HOH A 52 552 115 HOH HOH . 
L 5 HOH A 53 553 61 HOH HOH . 
L 5 HOH A 54 554 120 HOH HOH . 
L 5 HOH A 55 555 117 HOH HOH . 
L 5 HOH A 56 556 21 HOH HOH . 
L 5 HOH A 57 557 88 HOH HOH . 
L 5 HOH A 58 558 8 HOH HOH . 
L 5 HOH A 59 559 16 HOH HOH . 
L 5 HOH A 60 560 29 HOH HOH . 
L 5 HOH A 61 561 150 HOH HOH . 
L 5 HOH A 62 562 53 HOH HOH . 
L 5 HOH A 63 563 69 HOH HOH . 
L 5 HOH A 64 564 100 HOH HOH . 
L 5 HOH A 65 565 3 HOH HOH . 
L 5 HOH A 66 566 40 HOH HOH . 
L 5 HOH A 67 567 18 HOH HOH . 
L 5 HOH A 68 568 42 HOH HOH . 
L 5 HOH A 69 569 99 HOH HOH . 
L 5 HOH A 70 570 52 HOH HOH . 
L 5 HOH A 71 571 79 HOH HOH . 
L 5 HOH A 72 572 106 HOH HOH . 
L 5 HOH A 73 573 114 HOH HOH . 
L 5 HOH A 74 574 35 HOH HOH . 
L 5 HOH A 75 575 17 HOH HOH . 
L 5 HOH A 76 576 141 HOH HOH . 
L 5 HOH A 77 577 84 HOH HOH . 
L 5 HOH A 78 578 110 HOH HOH . 
L 5 HOH A 79 579 118 HOH HOH . 
L 5 HOH A 80 580 111 HOH HOH . 
L 5 HOH A 81 581 89 HOH HOH . 
L 5 HOH A 82 582 19 HOH HOH . 
L 5 HOH A 83 583 143 HOH HOH . 
L 5 HOH A 84 584 66 HOH HOH . 
L 5 HOH A 85 585 15 HOH HOH . 
L 5 HOH A 86 586 23 HOH HOH . 
L 5 HOH A 87 587 56 HOH HOH . 
L 5 HOH A 88 588 20 HOH HOH . 
L 5 HOH A 89 589 83 HOH HOH . 
L 5 HOH A 90 590 46 HOH HOH . 
L 5 HOH A 91 591 68 HOH HOH . 
L 5 HOH A 92 592 142 HOH HOH . 
L 5 HOH A 93 593 144 HOH HOH . 
L 5 HOH A 94 594 119 HOH HOH . 
L 5 HOH A 95 595 14 HOH HOH . 
L 5 HOH A 96 596 30 HOH HOH . 
L 5 HOH A 97 597 12 HOH HOH . 
L 5 HOH A 98 598 128 HOH HOH . 
L 5 HOH A 99 599 74 HOH HOH . 
L 5 HOH A 100 600 71 HOH HOH . 
L 5 HOH A 101 601 136 HOH HOH . 
L 5 HOH A 102 602 130 HOH HOH . 
L 5 HOH A 103 603 24 HOH HOH . 
L 5 HOH A 104 604 38 HOH HOH . 
L 5 HOH A 105 605 37 HOH HOH . 
L 5 HOH A 106 606 107 HOH HOH . 
L 5 HOH A 107 607 25 HOH HOH . 
L 5 HOH A 108 608 44 HOH HOH . 
L 5 HOH A 109 609 6 HOH HOH . 
L 5 HOH A 110 610 70 HOH HOH . 
L 5 HOH A 111 611 13 HOH HOH . 
L 5 HOH A 112 612 77 HOH HOH . 
L 5 HOH A 113 613 135 HOH HOH . 
L 5 HOH A 114 614 41 HOH HOH . 
L 5 HOH A 115 615 73 HOH HOH . 
L 5 HOH A 116 616 2 HOH HOH . 
L 5 HOH A 117 617 149 HOH HOH . 
L 5 HOH A 118 618 7 HOH HOH . 
L 5 HOH A 119 619 34 HOH HOH . 
L 5 HOH A 120 620 39 HOH HOH . 
L 5 HOH A 121 621 145 HOH HOH . 
L 5 HOH A 122 622 27 HOH HOH . 
L 5 HOH A 123 623 72 HOH HOH . 
L 5 HOH A 124 624 125 HOH HOH . 
L 5 HOH A 125 625 112 HOH HOH . 
L 5 HOH A 126 626 78 HOH HOH . 
L 5 HOH A 127 627 65 HOH HOH . 
L 5 HOH A 128 628 91 HOH HOH . 
L 5 HOH A 129 629 122 HOH HOH . 
L 5 HOH A 130 630 121 HOH HOH . 
L 5 HOH A 131 631 139 HOH HOH . 
L 5 HOH A 132 632 137 HOH HOH . 
L 5 HOH A 133 633 103 HOH HOH . 
L 5 HOH A 134 634 85 HOH HOH . 
L 5 HOH A 135 635 132 HOH HOH . 
L 5 HOH A 136 636 64 HOH HOH . 
L 5 HOH A 137 637 134 HOH HOH . 
L 5 HOH A 138 638 80 HOH HOH . 
L 5 HOH A 139 639 93 HOH HOH . 
L 5 HOH A 140 640 62 HOH HOH . 
L 5 HOH A 141 641 33 HOH HOH . 
L 5 HOH A 142 642 48 HOH HOH . 
L 5 HOH A 143 643 126 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 S7J . . . C 2 -3.116 -15.218 -29.756 0.56 40.23 ? N1 S7J 402 A 1 
HETATM 2 C C4 S7J . . . C 2 -3.133 -17.543 -28.249 0.56 41.1 ? C4 S7J 402 A 1 
HETATM 3 C C5 S7J . . . C 2 -2.469 -16.621 -31.723 0.56 41.42 ? C5 S7J 402 A 1 
HETATM 4 N N S7J . . . C 2 -3.042 -17.081 -25.337 0.56 43.56 ? N S7J 402 A 1 
HETATM 5 C C S7J . . . C 2 -3.782 -16.292 -26.179 0.56 42.37 ? C S7J 402 A 1 
HETATM 6 O O S7J . . . C 2 -4.68 -15.604 -25.743 0.56 42.66 ? O S7J 402 A 1 
HETATM 7 C C1 S7J . . . C 2 -3.428 -16.344 -27.629 0.56 41.28 ? C1 S7J 402 A 1 
HETATM 8 C C2 S7J . . . C 2 -3.408 -15.18 -28.42 0.56 40.59 ? C2 S7J 402 A 1 
HETATM 9 C C3 S7J . . . C 2 -2.843 -16.47 -30.246 0.56 39.92 ? C3 S7J 402 A 1 
HETATM 10 F F S7J . . . C 2 -1.889 -17.814 -32.013 0.56 39.78 ? F S7J 402 A 1 
HETATM 11 F F1 S7J . . . C 2 -1.633 -15.652 -32.178 0.56 44.36 ? F1 S7J 402 A 1 
HETATM 12 F F2 S7J . . . C 2 -3.554 -16.578 -32.48 0.56 39.38 ? F2 S7J 402 A 1 
HETATM 13 N N2 S7J . . . C 2 -2.841 -17.643 -29.559 0.56 40.5 ? N2 S7J 402 A 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           13 
#