data_5RZO # _model_server_result.job_id 3-13Jjy5rSloTm4vWG5bKQ _model_server_result.datetime_utc '2024-11-07 08:56:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5rzo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5RZO # _exptl.entry_id 5RZO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 219.692 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(5-chloro-1,2,3-thiadiazol-4-yl)methyl]morpholine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5RZO _cell.length_a 38.498 _cell.length_b 77.528 _cell.length_c 99.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5RZO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H10 Cl N3 O S' _chem_comp.formula_weight 219.692 _chem_comp.id WJ4 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(5-chloro-1,2,3-thiadiazol-4-yl)methyl]morpholine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C CL WJ4 sing 394 n n C S WJ4 sing 395 n y S N WJ4 sing 396 n y N N1 WJ4 doub 397 n y N1 C1 WJ4 sing 398 n y C1 C WJ4 doub 399 n y C2 C1 WJ4 sing 400 n n N2 C2 WJ4 sing 401 n n N2 C3 WJ4 sing 402 n n C3 C4 WJ4 sing 403 n n C4 O WJ4 sing 404 n n O C5 WJ4 sing 405 n n C5 C6 WJ4 sing 406 n n C6 N2 WJ4 sing 407 n n C4 H5 WJ4 sing 408 n n C4 H4 WJ4 sing 409 n n C5 H6 WJ4 sing 410 n n C5 H7 WJ4 sing 411 n n C6 H8 WJ4 sing 412 n n C6 H9 WJ4 sing 413 n n C2 H1 WJ4 sing 414 n n C2 H WJ4 sing 415 n n C3 H3 WJ4 sing 416 n n C3 H2 WJ4 sing 417 n n # _atom_sites.entry_id 5RZO _atom_sites.fract_transf_matrix[1][1] 0.025975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WJ4 A 1 401 401 WJ4 LIG . C 3 DMS A 1 402 1 DMS DMS . D 3 DMS A 1 403 2 DMS DMS . E 4 EDO A 1 404 1 EDO EDO . F 4 EDO A 1 405 4 EDO EDO . G 4 EDO A 1 406 5 EDO EDO . H 5 HOH A 1 501 127 HOH HOH . H 5 HOH A 2 502 113 HOH HOH . H 5 HOH A 3 503 133 HOH HOH . H 5 HOH A 4 504 96 HOH HOH . H 5 HOH A 5 505 124 HOH HOH . H 5 HOH A 6 506 129 HOH HOH . H 5 HOH A 7 507 10 HOH HOH . H 5 HOH A 8 508 51 HOH HOH . H 5 HOH A 9 509 54 HOH HOH . H 5 HOH A 10 510 148 HOH HOH . H 5 HOH A 11 511 1 HOH HOH . H 5 HOH A 12 512 67 HOH HOH . H 5 HOH A 13 513 42 HOH HOH . H 5 HOH A 14 514 9 HOH HOH . H 5 HOH A 15 515 120 HOH HOH . H 5 HOH A 16 516 138 HOH HOH . H 5 HOH A 17 517 26 HOH HOH . H 5 HOH A 18 518 43 HOH HOH . H 5 HOH A 19 519 63 HOH HOH . H 5 HOH A 20 520 101 HOH HOH . H 5 HOH A 21 521 109 HOH HOH . H 5 HOH A 22 522 5 HOH HOH . H 5 HOH A 23 523 45 HOH HOH . H 5 HOH A 24 524 36 HOH HOH . H 5 HOH A 25 525 28 HOH HOH . H 5 HOH A 26 526 95 HOH HOH . H 5 HOH A 27 527 97 HOH HOH . H 5 HOH A 28 528 75 HOH HOH . H 5 HOH A 29 529 53 HOH HOH . H 5 HOH A 30 530 57 HOH HOH . H 5 HOH A 31 531 105 HOH HOH . H 5 HOH A 32 532 98 HOH HOH . H 5 HOH A 33 533 88 HOH HOH . H 5 HOH A 34 534 22 HOH HOH . H 5 HOH A 35 535 47 HOH HOH . H 5 HOH A 36 536 111 HOH HOH . H 5 HOH A 37 537 146 HOH HOH . H 5 HOH A 38 538 116 HOH HOH . H 5 HOH A 39 539 32 HOH HOH . H 5 HOH A 40 540 89 HOH HOH . H 5 HOH A 41 541 92 HOH HOH . H 5 HOH A 42 542 8 HOH HOH . H 5 HOH A 43 543 79 HOH HOH . H 5 HOH A 44 544 114 HOH HOH . H 5 HOH A 45 545 82 HOH HOH . H 5 HOH A 46 546 142 HOH HOH . H 5 HOH A 47 547 86 HOH HOH . H 5 HOH A 48 548 50 HOH HOH . H 5 HOH A 49 549 16 HOH HOH . H 5 HOH A 50 550 115 HOH HOH . H 5 HOH A 51 551 100 HOH HOH . H 5 HOH A 52 552 4 HOH HOH . H 5 HOH A 53 553 106 HOH HOH . H 5 HOH A 54 554 150 HOH HOH . H 5 HOH A 55 555 117 HOH HOH . H 5 HOH A 56 556 55 HOH HOH . H 5 HOH A 57 557 84 HOH HOH . H 5 HOH A 58 558 61 HOH HOH . H 5 HOH A 59 559 71 HOH HOH . H 5 HOH A 60 560 112 HOH HOH . H 5 HOH A 61 561 52 HOH HOH . H 5 HOH A 62 562 99 HOH HOH . H 5 HOH A 63 563 107 HOH HOH . H 5 HOH A 64 564 60 HOH HOH . H 5 HOH A 65 565 76 HOH HOH . H 5 HOH A 66 566 69 HOH HOH . H 5 HOH A 67 567 58 HOH HOH . H 5 HOH A 68 568 108 HOH HOH . H 5 HOH A 69 569 11 HOH HOH . H 5 HOH A 70 570 143 HOH HOH . H 5 HOH A 71 571 21 HOH HOH . H 5 HOH A 72 572 3 HOH HOH . H 5 HOH A 73 573 59 HOH HOH . H 5 HOH A 74 574 18 HOH HOH . H 5 HOH A 75 575 17 HOH HOH . H 5 HOH A 76 576 68 HOH HOH . H 5 HOH A 77 577 30 HOH HOH . H 5 HOH A 78 578 15 HOH HOH . H 5 HOH A 79 579 40 HOH HOH . H 5 HOH A 80 580 94 HOH HOH . H 5 HOH A 81 581 66 HOH HOH . H 5 HOH A 82 582 31 HOH HOH . H 5 HOH A 83 583 83 HOH HOH . H 5 HOH A 84 584 12 HOH HOH . H 5 HOH A 85 585 29 HOH HOH . H 5 HOH A 86 586 24 HOH HOH . H 5 HOH A 87 587 90 HOH HOH . H 5 HOH A 88 588 23 HOH HOH . H 5 HOH A 89 589 81 HOH HOH . H 5 HOH A 90 590 14 HOH HOH . H 5 HOH A 91 591 128 HOH HOH . H 5 HOH A 92 592 46 HOH HOH . H 5 HOH A 93 593 77 HOH HOH . H 5 HOH A 94 594 6 HOH HOH . H 5 HOH A 95 595 91 HOH HOH . H 5 HOH A 96 596 38 HOH HOH . H 5 HOH A 97 597 7 HOH HOH . H 5 HOH A 98 598 20 HOH HOH . H 5 HOH A 99 599 34 HOH HOH . H 5 HOH A 100 600 13 HOH HOH . H 5 HOH A 101 601 37 HOH HOH . H 5 HOH A 102 602 104 HOH HOH . H 5 HOH A 103 603 41 HOH HOH . H 5 HOH A 104 604 136 HOH HOH . H 5 HOH A 105 605 125 HOH HOH . H 5 HOH A 106 606 44 HOH HOH . H 5 HOH A 107 607 56 HOH HOH . H 5 HOH A 108 608 130 HOH HOH . H 5 HOH A 109 609 110 HOH HOH . H 5 HOH A 110 610 19 HOH HOH . H 5 HOH A 111 611 122 HOH HOH . H 5 HOH A 112 612 74 HOH HOH . H 5 HOH A 113 613 119 HOH HOH . H 5 HOH A 114 614 70 HOH HOH . H 5 HOH A 115 615 141 HOH HOH . H 5 HOH A 116 616 139 HOH HOH . H 5 HOH A 117 617 39 HOH HOH . H 5 HOH A 118 618 65 HOH HOH . H 5 HOH A 119 619 102 HOH HOH . H 5 HOH A 120 620 73 HOH HOH . H 5 HOH A 121 621 87 HOH HOH . H 5 HOH A 122 622 35 HOH HOH . H 5 HOH A 123 623 118 HOH HOH . H 5 HOH A 124 624 2 HOH HOH . H 5 HOH A 125 625 25 HOH HOH . H 5 HOH A 126 626 123 HOH HOH . H 5 HOH A 127 627 27 HOH HOH . H 5 HOH A 128 628 149 HOH HOH . H 5 HOH A 129 629 145 HOH HOH . H 5 HOH A 130 630 147 HOH HOH . H 5 HOH A 131 631 72 HOH HOH . H 5 HOH A 132 632 121 HOH HOH . H 5 HOH A 133 633 135 HOH HOH . H 5 HOH A 134 634 78 HOH HOH . H 5 HOH A 135 635 132 HOH HOH . H 5 HOH A 136 636 144 HOH HOH . H 5 HOH A 137 637 85 HOH HOH . H 5 HOH A 138 638 137 HOH HOH . H 5 HOH A 139 639 64 HOH HOH . H 5 HOH A 140 640 134 HOH HOH . H 5 HOH A 141 641 80 HOH HOH . H 5 HOH A 142 642 126 HOH HOH . H 5 HOH A 143 643 62 HOH HOH . H 5 HOH A 144 644 103 HOH HOH . H 5 HOH A 145 645 93 HOH HOH . H 5 HOH A 146 646 33 HOH HOH . H 5 HOH A 147 647 48 HOH HOH . H 5 HOH A 148 648 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 WJ4 . . . B 2 5.1 -4.679 -19.615 0.38 31.54 ? N1 WJ4 401 A 1 HETATM 2 C C4 WJ4 . . . B 2 7.181 0.51 -18.84 0.38 32.2 ? C4 WJ4 401 A 1 HETATM 3 C C5 WJ4 . . . B 2 7.889 -1.13 -20.398 0.38 32.54 ? C5 WJ4 401 A 1 HETATM 4 C C6 WJ4 . . . B 2 6.904 -2.234 -19.918 0.38 31.86 ? C6 WJ4 401 A 1 HETATM 5 N N WJ4 . . . B 2 4.318 -5.481 -20.143 0.38 30.16 ? N WJ4 401 A 1 HETATM 6 C C WJ4 . . . B 2 3.085 -3.866 -18.797 0.38 31.53 ? C WJ4 401 A 1 HETATM 7 O O WJ4 . . . B 2 7.357 0.167 -20.192 0.38 32.43 ? O WJ4 401 A 1 HETATM 8 C C1 WJ4 . . . B 2 4.474 -3.688 -18.796 0.38 31.28 ? C1 WJ4 401 A 1 HETATM 9 C C2 WJ4 . . . B 2 5.332 -2.723 -18.056 0.38 32.09 ? C2 WJ4 401 A 1 HETATM 10 C C3 WJ4 . . . B 2 6.645 -0.687 -18.017 0.38 32.85 ? C3 WJ4 401 A 1 HETATM 11 N N2 WJ4 . . . B 2 5.927 -1.658 -18.931 0.38 32.17 ? N2 WJ4 401 A 1 HETATM 12 S S WJ4 . . . B 2 2.685 -5.191 -19.755 0.38 31.02 ? S WJ4 401 A 1 HETATM 13 CL CL WJ4 . . . B 2 1.904 -3.006 -18.048 0.38 30.66 ? CL WJ4 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #