data_5S4N # _model_server_result.job_id Wa1ndRflUMOiSQTammTrfw _model_server_result.datetime_utc '2024-11-13 12:09:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s4n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 5S4N # _exptl.entry_id 5S4N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S4N _cell.length_a 105.26 _cell.length_b 158.63 _cell.length_c 179.55 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S4N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc10 H MG MG . A MG 502 1_555 Z O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc11 H MG MG . A MG 502 1_555 Z O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc12 H MG MG . A MG 502 1_555 Z O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc13 I CA CA . A CA 503 1_555 Z O HOH . A HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc14 B OE1 GLN 11 B GLN 11 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc15 B OE1 GLU 111 B GLU 113 1_555 L CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc16 J O1A GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc17 K MG MG . B MG 502 1_555 AA O HOH . B HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc18 K MG MG . B MG 502 1_555 AA O HOH . B HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc19 K MG MG . B MG 502 1_555 BA O HOH . C HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc20 L CA CA . B CA 503 4_455 C OE1 GLU 284 C GLU 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? metalc ? metalc21 C OD1 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc22 C OD2 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc23 C O THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc24 C OG1 THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc25 C O GLY 44 C GLY 44 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc26 C OE1 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc27 C OE2 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc28 Q O1G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc29 Q O1B GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc30 R MG MG . C MG 502 1_555 BA O HOH . C HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc31 R MG MG . C MG 502 1_555 BA O HOH . C HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc32 R MG MG . C MG 502 1_555 BA O HOH . C HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc33 R MG MG . C MG 502 1_555 BA O HOH . C HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc34 S CA CA . C CA 503 1_555 BA O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc35 D OE1 GLN 11 D GLN 11 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc36 T O1A GDP . D GDP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc37 U MG MG . D MG 502 1_555 CA O HOH . D HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc38 E OD2 ASP 42 E ASP 44 1_555 W CA CA . E CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.135 ? metalc ? metalc39 W CA CA . E CA 201 1_555 DA O HOH . E HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc40 F OE2 GLU 331 F GLU 331 1_555 Y MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc41 X O3G ACP . F ACP 401 1_555 Y MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc42 X O1B ACP . F ACP 401 1_555 Y MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S4N _atom_sites.fract_transf_matrix[1][1] 0.0095 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006304 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005569 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 7 CA B 1 503 503 CA CA . M 9 MES B 1 504 504 MES MES . N 10 UVA B 1 505 2 UVA DRG . O 10 UVA B 1 506 3 UVA DRG . P 10 UVA B 1 507 4 UVA DRG . Q 5 GTP C 1 501 501 GTP GTP . R 6 MG C 1 502 502 MG MG . S 7 CA C 1 503 503 CA CA . T 8 GDP D 1 501 501 GDP GDP . U 6 MG D 1 502 502 MG MG . V 10 UVA D 1 503 1 UVA DRG . W 7 CA E 1 201 504 CA CA . X 11 ACP F 1 401 401 ACP ACP . Y 6 MG F 1 402 402 MG MG . Z 12 HOH A 1 601 79 HOH HOH . Z 12 HOH A 2 602 175 HOH HOH . Z 12 HOH A 3 603 35 HOH HOH . Z 12 HOH A 4 604 25 HOH HOH . Z 12 HOH A 5 605 93 HOH HOH . Z 12 HOH A 6 606 55 HOH HOH . Z 12 HOH A 7 607 126 HOH HOH . Z 12 HOH A 8 608 161 HOH HOH . Z 12 HOH A 9 609 109 HOH HOH . Z 12 HOH A 10 610 94 HOH HOH . Z 12 HOH A 11 611 123 HOH HOH . Z 12 HOH A 12 612 40 HOH HOH . Z 12 HOH A 13 613 78 HOH HOH . Z 12 HOH A 14 614 198 HOH HOH . Z 12 HOH A 15 615 65 HOH HOH . Z 12 HOH A 16 616 180 HOH HOH . Z 12 HOH A 17 617 29 HOH HOH . Z 12 HOH A 18 618 135 HOH HOH . Z 12 HOH A 19 619 88 HOH HOH . Z 12 HOH A 20 620 22 HOH HOH . Z 12 HOH A 21 621 87 HOH HOH . Z 12 HOH A 22 622 152 HOH HOH . Z 12 HOH A 23 623 60 HOH HOH . Z 12 HOH A 24 624 719 HOH HOH . Z 12 HOH A 25 625 156 HOH HOH . Z 12 HOH A 26 626 263 HOH HOH . Z 12 HOH A 27 627 125 HOH HOH . Z 12 HOH A 28 628 208 HOH HOH . Z 12 HOH A 29 629 258 HOH HOH . Z 12 HOH A 30 630 273 HOH HOH . Z 12 HOH A 31 631 295 HOH HOH . AA 12 HOH B 1 601 331 HOH HOH . AA 12 HOH B 2 602 349 HOH HOH . AA 12 HOH B 3 603 550 HOH HOH . AA 12 HOH B 4 604 330 HOH HOH . AA 12 HOH B 5 605 335 HOH HOH . AA 12 HOH B 6 606 469 HOH HOH . AA 12 HOH B 7 607 526 HOH HOH . AA 12 HOH B 8 608 362 HOH HOH . AA 12 HOH B 9 609 1514 HOH HOH . AA 12 HOH B 10 610 351 HOH HOH . AA 12 HOH B 11 611 430 HOH HOH . AA 12 HOH B 12 612 428 HOH HOH . AA 12 HOH B 13 613 442 HOH HOH . AA 12 HOH B 14 614 481 HOH HOH . AA 12 HOH B 15 615 390 HOH HOH . AA 12 HOH B 16 616 440 HOH HOH . AA 12 HOH B 17 617 386 HOH HOH . AA 12 HOH B 18 618 487 HOH HOH . AA 12 HOH B 19 619 825 HOH HOH . AA 12 HOH B 20 620 1362 HOH HOH . AA 12 HOH B 21 621 479 HOH HOH . AA 12 HOH B 22 622 432 HOH HOH . AA 12 HOH B 23 623 412 HOH HOH . AA 12 HOH B 24 624 375 HOH HOH . AA 12 HOH B 25 625 422 HOH HOH . AA 12 HOH B 26 626 474 HOH HOH . AA 12 HOH B 27 627 448 HOH HOH . AA 12 HOH B 28 628 509 HOH HOH . AA 12 HOH B 29 629 470 HOH HOH . AA 12 HOH B 30 630 387 HOH HOH . AA 12 HOH B 31 631 484 HOH HOH . AA 12 HOH B 32 632 436 HOH HOH . AA 12 HOH B 33 633 416 HOH HOH . AA 12 HOH B 34 634 495 HOH HOH . AA 12 HOH B 35 635 534 HOH HOH . AA 12 HOH B 36 636 345 HOH HOH . AA 12 HOH B 37 637 438 HOH HOH . AA 12 HOH B 38 638 540 HOH HOH . AA 12 HOH B 39 639 290 HOH HOH . AA 12 HOH B 40 640 503 HOH HOH . AA 12 HOH B 41 641 617 HOH HOH . AA 12 HOH B 42 642 297 HOH HOH . AA 12 HOH B 43 643 610 HOH HOH . AA 12 HOH B 44 644 614 HOH HOH . BA 12 HOH C 1 601 837 HOH HOH . BA 12 HOH C 2 602 645 HOH HOH . BA 12 HOH C 3 603 641 HOH HOH . BA 12 HOH C 4 604 669 HOH HOH . BA 12 HOH C 5 605 735 HOH HOH . BA 12 HOH C 6 606 753 HOH HOH . BA 12 HOH C 7 607 663 HOH HOH . BA 12 HOH C 8 608 732 HOH HOH . BA 12 HOH C 9 609 705 HOH HOH . BA 12 HOH C 10 610 677 HOH HOH . BA 12 HOH C 11 611 803 HOH HOH . BA 12 HOH C 12 612 923 HOH HOH . BA 12 HOH C 13 613 910 HOH HOH . BA 12 HOH C 14 614 800 HOH HOH . BA 12 HOH C 15 615 676 HOH HOH . BA 12 HOH C 16 616 721 HOH HOH . BA 12 HOH C 17 617 723 HOH HOH . BA 12 HOH C 18 618 659 HOH HOH . BA 12 HOH C 19 619 859 HOH HOH . BA 12 HOH C 20 620 667 HOH HOH . BA 12 HOH C 21 621 687 HOH HOH . BA 12 HOH C 22 622 792 HOH HOH . BA 12 HOH C 23 623 738 HOH HOH . BA 12 HOH C 24 624 819 HOH HOH . BA 12 HOH C 25 625 714 HOH HOH . BA 12 HOH C 26 626 744 HOH HOH . BA 12 HOH C 27 627 829 HOH HOH . BA 12 HOH C 28 628 664 HOH HOH . BA 12 HOH C 29 629 888 HOH HOH . BA 12 HOH C 30 630 692 HOH HOH . BA 12 HOH C 31 631 782 HOH HOH . BA 12 HOH C 32 632 848 HOH HOH . BA 12 HOH C 33 633 906 HOH HOH . BA 12 HOH C 34 634 1041 HOH HOH . BA 12 HOH C 35 635 847 HOH HOH . BA 12 HOH C 36 636 655 HOH HOH . BA 12 HOH C 37 637 810 HOH HOH . BA 12 HOH C 38 638 789 HOH HOH . BA 12 HOH C 39 639 833 HOH HOH . BA 12 HOH C 40 640 817 HOH HOH . BA 12 HOH C 41 641 748 HOH HOH . BA 12 HOH C 42 642 851 HOH HOH . BA 12 HOH C 43 643 971 HOH HOH . BA 12 HOH C 44 644 717 HOH HOH . BA 12 HOH C 45 645 840 HOH HOH . BA 12 HOH C 46 646 660 HOH HOH . BA 12 HOH C 47 647 764 HOH HOH . BA 12 HOH C 48 648 757 HOH HOH . BA 12 HOH C 49 649 811 HOH HOH . BA 12 HOH C 50 650 953 HOH HOH . BA 12 HOH C 51 651 765 HOH HOH . BA 12 HOH C 52 652 806 HOH HOH . BA 12 HOH C 53 653 893 HOH HOH . BA 12 HOH C 54 654 747 HOH HOH . BA 12 HOH C 55 655 733 HOH HOH . BA 12 HOH C 56 656 787 HOH HOH . BA 12 HOH C 57 657 864 HOH HOH . BA 12 HOH C 58 658 877 HOH HOH . BA 12 HOH C 59 659 835 HOH HOH . BA 12 HOH C 60 660 909 HOH HOH . BA 12 HOH C 61 661 761 HOH HOH . BA 12 HOH C 62 662 991 HOH HOH . BA 12 HOH C 63 663 937 HOH HOH . BA 12 HOH C 64 664 1016 HOH HOH . BA 12 HOH C 65 665 913 HOH HOH . BA 12 HOH C 66 666 936 HOH HOH . BA 12 HOH C 67 667 938 HOH HOH . BA 12 HOH C 68 668 874 HOH HOH . BA 12 HOH C 69 669 689 HOH HOH . BA 12 HOH C 70 670 822 HOH HOH . BA 12 HOH C 71 671 818 HOH HOH . BA 12 HOH C 72 672 751 HOH HOH . BA 12 HOH C 73 673 882 HOH HOH . BA 12 HOH C 74 674 801 HOH HOH . BA 12 HOH C 75 675 808 HOH HOH . BA 12 HOH C 76 676 995 HOH HOH . BA 12 HOH C 77 677 872 HOH HOH . BA 12 HOH C 78 678 977 HOH HOH . BA 12 HOH C 79 679 980 HOH HOH . BA 12 HOH C 80 680 956 HOH HOH . BA 12 HOH C 81 681 885 HOH HOH . BA 12 HOH C 82 682 924 HOH HOH . BA 12 HOH C 83 683 776 HOH HOH . BA 12 HOH C 84 684 889 HOH HOH . BA 12 HOH C 85 685 775 HOH HOH . BA 12 HOH C 86 686 1007 HOH HOH . BA 12 HOH C 87 687 954 HOH HOH . BA 12 HOH C 88 688 883 HOH HOH . BA 12 HOH C 89 689 928 HOH HOH . BA 12 HOH C 90 690 1054 HOH HOH . BA 12 HOH C 91 691 903 HOH HOH . BA 12 HOH C 92 692 1001 HOH HOH . BA 12 HOH C 93 693 1002 HOH HOH . BA 12 HOH C 94 694 821 HOH HOH . BA 12 HOH C 95 695 1024 HOH HOH . BA 12 HOH C 96 696 986 HOH HOH . BA 12 HOH C 97 697 1089 HOH HOH . BA 12 HOH C 98 698 226 HOH HOH . BA 12 HOH C 99 699 1056 HOH HOH . BA 12 HOH C 100 700 1000 HOH HOH . BA 12 HOH C 101 701 1023 HOH HOH . BA 12 HOH C 102 702 973 HOH HOH . BA 12 HOH C 103 703 1065 HOH HOH . BA 12 HOH C 104 704 1048 HOH HOH . BA 12 HOH C 105 705 1025 HOH HOH . BA 12 HOH C 106 706 1082 HOH HOH . BA 12 HOH C 107 707 1095 HOH HOH . BA 12 HOH C 108 708 1076 HOH HOH . CA 12 HOH D 1 601 1178 HOH HOH . CA 12 HOH D 2 602 1200 HOH HOH . CA 12 HOH D 3 603 1274 HOH HOH . CA 12 HOH D 4 604 1177 HOH HOH . CA 12 HOH D 5 605 1237 HOH HOH . CA 12 HOH D 6 606 1181 HOH HOH . CA 12 HOH D 7 607 1257 HOH HOH . CA 12 HOH D 8 608 1220 HOH HOH . CA 12 HOH D 9 609 1212 HOH HOH . CA 12 HOH D 10 610 1222 HOH HOH . CA 12 HOH D 11 611 1245 HOH HOH . CA 12 HOH D 12 612 1304 HOH HOH . DA 12 HOH E 1 301 379 HOH HOH . DA 12 HOH E 2 302 1391 HOH HOH . DA 12 HOH E 3 303 1334 HOH HOH . DA 12 HOH E 4 304 393 HOH HOH . DA 12 HOH E 5 305 1376 HOH HOH . DA 12 HOH E 6 306 1365 HOH HOH . DA 12 HOH E 7 307 577 HOH HOH . DA 12 HOH E 8 308 1406 HOH HOH . DA 12 HOH E 9 309 528 HOH HOH . EA 12 HOH F 1 501 1513 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 8 18.794 49.839 15.8 1 54.03 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . J 8 18.063 50.496 14.65 1 59.16 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . J 8 19.834 50.793 16.338 1 60.69 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . J 8 19.469 48.558 15.371 1 54.67 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . J 8 17.794 49.503 17.009 1 62.42 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . J 8 16.255 49.081 16.819 1 54.15 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . J 8 16.004 48.269 15.575 1 67.55 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . J 8 15.409 50.331 16.835 1 58.28 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . J 8 16.039 48.199 18.148 1 60.77 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . J 8 15.043 47.186 18.232 1 61.92 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . J 8 14.461 47.215 19.639 1 60.03 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . J 8 14.043 48.553 19.914 1 52.6 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . J 8 13.224 46.349 19.732 1 60.26 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . J 8 13.132 45.826 21.059 1 61.96 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . J 8 12.085 47.31 19.485 1 58.98 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . J 8 10.904 46.91 20.187 1 63.01 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . J 8 12.621 48.626 20.019 1 59.23 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . J 8 12.123 49.762 19.212 1 61.81 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . J 8 12.35 49.964 17.903 1 57.53 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . J 8 11.75 51.105 17.481 1 54.88 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . J 8 11.125 51.654 18.533 1 58.65 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . J 8 10.311 52.863 18.782 1 60.62 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . J 8 10.059 53.669 17.863 1 59.56 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . J 8 9.853 53.067 20.025 1 62.53 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . J 8 10.109 52.219 21.04 1 57.71 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . J 8 9.599 52.509 22.264 1 56.16 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . J 8 10.853 51.091 20.884 1 56.43 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . J 8 11.376 50.766 19.678 1 63.02 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #