data_5S4R # _model_server_result.job_id BaRf0ZqCTTQ-ZnIDto9NAQ _model_server_result.datetime_utc '2024-11-22 18:34:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 5S4R # _exptl.entry_id 5S4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S4R _cell.length_a 105.36 _cell.length_b 159.89 _cell.length_c 180.03 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc10 H MG MG . A MG 502 1_555 Y O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc11 H MG MG . A MG 502 1_555 Y O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? metalc ? metalc12 H MG MG . A MG 502 1_555 Y O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc13 H MG MG . A MG 502 1_555 Y O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc14 I CA CA . A CA 503 1_555 Y O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc15 B OE1 GLN 11 B GLN 11 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc16 B OE1 GLU 111 B GLU 113 1_555 L CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc17 J O1A GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc18 K MG MG . B MG 502 1_555 Z O HOH . B HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc19 K MG MG . B MG 502 1_555 Z O HOH . B HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc20 K MG MG . B MG 502 1_555 Z O HOH . B HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc21 K MG MG . B MG 502 1_555 AA O HOH . C HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc22 C OD1 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc23 C OD2 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc24 C O THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc25 C OG1 THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc26 C O GLY 44 C GLY 44 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc27 C OE1 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc28 C OE2 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc29 Q O1G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc30 Q O1B GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc31 R MG MG . C MG 502 1_555 AA O HOH . C HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc32 R MG MG . C MG 502 1_555 AA O HOH . C HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc33 R MG MG . C MG 502 1_555 AA O HOH . C HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc34 R MG MG . C MG 502 1_555 AA O HOH . C HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc35 S CA CA . C CA 503 1_555 AA O HOH . C HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc36 D OE1 GLN 11 D GLN 11 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc37 T O1A GDP . D GDP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc38 U MG MG . D MG 502 1_555 BA O HOH . D HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc39 F OE2 GLU 331 F GLU 331 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc40 W O3G ACP . F ACP 401 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc41 W O1B ACP . F ACP 401 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S4R _atom_sites.fract_transf_matrix[1][1] 0.009491 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005555 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 7 CA B 1 503 503 CA CA . M 9 MES B 1 504 504 MES MES . N 10 NW7 B 1 505 1 NW7 DRG . O 10 NW7 B 1 506 2 NW7 DRG . P 10 NW7 B 1 507 3 NW7 DRG . Q 5 GTP C 1 501 501 GTP GTP . R 6 MG C 1 502 502 MG MG . S 7 CA C 1 503 503 CA CA . T 8 GDP D 1 501 501 GDP GDP . U 6 MG D 1 502 502 MG MG . V 7 CA E 1 201 504 CA CA . W 11 ACP F 1 401 401 ACP ACP . X 6 MG F 1 402 402 MG MG . Y 12 HOH A 1 601 35 HOH HOH . Y 12 HOH A 2 602 22 HOH HOH . Y 12 HOH A 3 603 29 HOH HOH . Y 12 HOH A 4 604 1556 HOH HOH . Y 12 HOH A 5 605 9 HOH HOH . Y 12 HOH A 6 606 140 HOH HOH . Y 12 HOH A 7 607 25 HOH HOH . Y 12 HOH A 8 608 152 HOH HOH . Y 12 HOH A 9 609 1340 HOH HOH . Y 12 HOH A 10 610 94 HOH HOH . Y 12 HOH A 11 611 123 HOH HOH . Y 12 HOH A 12 612 47 HOH HOH . Y 12 HOH A 13 613 60 HOH HOH . Y 12 HOH A 14 614 88 HOH HOH . Y 12 HOH A 15 615 87 HOH HOH . Y 12 HOH A 16 616 65 HOH HOH . Y 12 HOH A 17 617 40 HOH HOH . Y 12 HOH A 18 618 52 HOH HOH . Y 12 HOH A 19 619 78 HOH HOH . Y 12 HOH A 20 620 97 HOH HOH . Y 12 HOH A 21 621 55 HOH HOH . Y 12 HOH A 22 622 81 HOH HOH . Y 12 HOH A 23 623 93 HOH HOH . Y 12 HOH A 24 624 434 HOH HOH . Y 12 HOH A 25 625 83 HOH HOH . Y 12 HOH A 26 626 126 HOH HOH . Y 12 HOH A 27 627 24 HOH HOH . Y 12 HOH A 28 628 109 HOH HOH . Y 12 HOH A 29 629 180 HOH HOH . Y 12 HOH A 30 630 161 HOH HOH . Y 12 HOH A 31 631 135 HOH HOH . Y 12 HOH A 32 632 118 HOH HOH . Y 12 HOH A 33 633 174 HOH HOH . Y 12 HOH A 34 634 198 HOH HOH . Y 12 HOH A 35 635 106 HOH HOH . Y 12 HOH A 36 636 167 HOH HOH . Y 12 HOH A 37 637 203 HOH HOH . Y 12 HOH A 38 638 263 HOH HOH . Y 12 HOH A 39 639 258 HOH HOH . Y 12 HOH A 40 640 719 HOH HOH . Y 12 HOH A 41 641 195 HOH HOH . Y 12 HOH A 42 642 125 HOH HOH . Y 12 HOH A 43 643 201 HOH HOH . Y 12 HOH A 44 644 228 HOH HOH . Y 12 HOH A 45 645 156 HOH HOH . Y 12 HOH A 46 646 43 HOH HOH . Y 12 HOH A 47 647 273 HOH HOH . Y 12 HOH A 48 648 196 HOH HOH . Y 12 HOH A 49 649 257 HOH HOH . Y 12 HOH A 50 650 265 HOH HOH . Y 12 HOH A 51 651 267 HOH HOH . Y 12 HOH A 52 652 297 HOH HOH . Y 12 HOH A 53 653 141 HOH HOH . Y 12 HOH A 54 654 226 HOH HOH . Y 12 HOH A 55 655 202 HOH HOH . Y 12 HOH A 56 656 291 HOH HOH . Z 12 HOH B 1 601 378 HOH HOH . Z 12 HOH B 2 602 335 HOH HOH . Z 12 HOH B 3 603 550 HOH HOH . Z 12 HOH B 4 604 392 HOH HOH . Z 12 HOH B 5 605 526 HOH HOH . Z 12 HOH B 6 606 519 HOH HOH . Z 12 HOH B 7 607 387 HOH HOH . Z 12 HOH B 8 608 505 HOH HOH . Z 12 HOH B 9 609 349 HOH HOH . Z 12 HOH B 10 610 318 HOH HOH . Z 12 HOH B 11 611 390 HOH HOH . Z 12 HOH B 12 612 333 HOH HOH . Z 12 HOH B 13 613 362 HOH HOH . Z 12 HOH B 14 614 386 HOH HOH . Z 12 HOH B 15 615 361 HOH HOH . Z 12 HOH B 16 616 379 HOH HOH . Z 12 HOH B 17 617 481 HOH HOH . Z 12 HOH B 18 618 438 HOH HOH . Z 12 HOH B 19 619 443 HOH HOH . Z 12 HOH B 20 620 442 HOH HOH . Z 12 HOH B 21 621 377 HOH HOH . Z 12 HOH B 22 622 351 HOH HOH . Z 12 HOH B 23 623 448 HOH HOH . Z 12 HOH B 24 624 458 HOH HOH . Z 12 HOH B 25 625 1362 HOH HOH . Z 12 HOH B 26 626 330 HOH HOH . Z 12 HOH B 27 627 375 HOH HOH . Z 12 HOH B 28 628 428 HOH HOH . Z 12 HOH B 29 629 502 HOH HOH . Z 12 HOH B 30 630 316 HOH HOH . Z 12 HOH B 31 631 487 HOH HOH . Z 12 HOH B 32 632 817 HOH HOH . Z 12 HOH B 33 633 416 HOH HOH . Z 12 HOH B 34 634 382 HOH HOH . Z 12 HOH B 35 635 430 HOH HOH . Z 12 HOH B 36 636 440 HOH HOH . Z 12 HOH B 37 637 405 HOH HOH . Z 12 HOH B 38 638 385 HOH HOH . Z 12 HOH B 39 639 453 HOH HOH . Z 12 HOH B 40 640 495 HOH HOH . Z 12 HOH B 41 641 432 HOH HOH . Z 12 HOH B 42 642 412 HOH HOH . Z 12 HOH B 43 643 474 HOH HOH . Z 12 HOH B 44 644 422 HOH HOH . Z 12 HOH B 45 645 529 HOH HOH . Z 12 HOH B 46 646 469 HOH HOH . Z 12 HOH B 47 647 508 HOH HOH . Z 12 HOH B 48 648 470 HOH HOH . Z 12 HOH B 49 649 503 HOH HOH . Z 12 HOH B 50 650 407 HOH HOH . Z 12 HOH B 51 651 337 HOH HOH . Z 12 HOH B 52 652 372 HOH HOH . Z 12 HOH B 53 653 1555 HOH HOH . Z 12 HOH B 54 654 479 HOH HOH . Z 12 HOH B 55 655 345 HOH HOH . Z 12 HOH B 56 656 573 HOH HOH . Z 12 HOH B 57 657 290 HOH HOH . Z 12 HOH B 58 658 551 HOH HOH . Z 12 HOH B 59 659 528 HOH HOH . Z 12 HOH B 60 660 534 HOH HOH . Z 12 HOH B 61 661 540 HOH HOH . Z 12 HOH B 62 662 949 HOH HOH . Z 12 HOH B 63 663 436 HOH HOH . Z 12 HOH B 64 664 617 HOH HOH . Z 12 HOH B 65 665 596 HOH HOH . Z 12 HOH B 66 666 597 HOH HOH . Z 12 HOH B 67 667 1064 HOH HOH . Z 12 HOH B 68 668 327 HOH HOH . Z 12 HOH B 69 669 605 HOH HOH . Z 12 HOH B 70 670 610 HOH HOH . AA 12 HOH C 1 601 641 HOH HOH . AA 12 HOH C 2 602 894 HOH HOH . AA 12 HOH C 3 603 658 HOH HOH . AA 12 HOH C 4 604 739 HOH HOH . AA 12 HOH C 5 605 622 HOH HOH . AA 12 HOH C 6 606 660 HOH HOH . AA 12 HOH C 7 607 645 HOH HOH . AA 12 HOH C 8 608 655 HOH HOH . AA 12 HOH C 9 609 730 HOH HOH . AA 12 HOH C 10 610 664 HOH HOH . AA 12 HOH C 11 611 770 HOH HOH . AA 12 HOH C 12 612 705 HOH HOH . AA 12 HOH C 13 613 1027 HOH HOH . AA 12 HOH C 14 614 819 HOH HOH . AA 12 HOH C 15 615 803 HOH HOH . AA 12 HOH C 16 616 669 HOH HOH . AA 12 HOH C 17 617 732 HOH HOH . AA 12 HOH C 18 618 679 HOH HOH . AA 12 HOH C 19 619 725 HOH HOH . AA 12 HOH C 20 620 468 HOH HOH . AA 12 HOH C 21 621 683 HOH HOH . AA 12 HOH C 22 622 692 HOH HOH . AA 12 HOH C 23 623 677 HOH HOH . AA 12 HOH C 24 624 753 HOH HOH . AA 12 HOH C 25 625 714 HOH HOH . AA 12 HOH C 26 626 670 HOH HOH . AA 12 HOH C 27 627 792 HOH HOH . AA 12 HOH C 28 628 796 HOH HOH . AA 12 HOH C 29 629 676 HOH HOH . AA 12 HOH C 30 630 698 HOH HOH . AA 12 HOH C 31 631 694 HOH HOH . AA 12 HOH C 32 632 825 HOH HOH . AA 12 HOH C 33 633 735 HOH HOH . AA 12 HOH C 34 634 746 HOH HOH . AA 12 HOH C 35 635 742 HOH HOH . AA 12 HOH C 36 636 914 HOH HOH . AA 12 HOH C 37 637 810 HOH HOH . AA 12 HOH C 38 638 738 HOH HOH . AA 12 HOH C 39 639 659 HOH HOH . AA 12 HOH C 40 640 840 HOH HOH . AA 12 HOH C 41 641 763 HOH HOH . AA 12 HOH C 42 642 744 HOH HOH . AA 12 HOH C 43 643 752 HOH HOH . AA 12 HOH C 44 644 848 HOH HOH . AA 12 HOH C 45 645 915 HOH HOH . AA 12 HOH C 46 646 740 HOH HOH . AA 12 HOH C 47 647 701 HOH HOH . AA 12 HOH C 48 648 696 HOH HOH . AA 12 HOH C 49 649 913 HOH HOH . AA 12 HOH C 50 650 765 HOH HOH . AA 12 HOH C 51 651 893 HOH HOH . AA 12 HOH C 52 652 710 HOH HOH . AA 12 HOH C 53 653 955 HOH HOH . AA 12 HOH C 54 654 782 HOH HOH . AA 12 HOH C 55 655 897 HOH HOH . AA 12 HOH C 56 656 721 HOH HOH . AA 12 HOH C 57 657 634 HOH HOH . AA 12 HOH C 58 658 864 HOH HOH . AA 12 HOH C 59 659 833 HOH HOH . AA 12 HOH C 60 660 750 HOH HOH . AA 12 HOH C 61 661 764 HOH HOH . AA 12 HOH C 62 662 723 HOH HOH . AA 12 HOH C 63 663 829 HOH HOH . AA 12 HOH C 64 664 834 HOH HOH . AA 12 HOH C 65 665 811 HOH HOH . AA 12 HOH C 66 666 786 HOH HOH . AA 12 HOH C 67 667 835 HOH HOH . AA 12 HOH C 68 668 868 HOH HOH . AA 12 HOH C 69 669 747 HOH HOH . AA 12 HOH C 70 670 859 HOH HOH . AA 12 HOH C 71 671 689 HOH HOH . AA 12 HOH C 72 672 687 HOH HOH . AA 12 HOH C 73 673 757 HOH HOH . AA 12 HOH C 74 674 773 HOH HOH . AA 12 HOH C 75 675 741 HOH HOH . AA 12 HOH C 76 676 749 HOH HOH . AA 12 HOH C 77 677 839 HOH HOH . AA 12 HOH C 78 678 906 HOH HOH . AA 12 HOH C 79 679 888 HOH HOH . AA 12 HOH C 80 680 789 HOH HOH . AA 12 HOH C 81 681 737 HOH HOH . AA 12 HOH C 82 682 953 HOH HOH . AA 12 HOH C 83 683 813 HOH HOH . AA 12 HOH C 84 684 931 HOH HOH . AA 12 HOH C 85 685 807 HOH HOH . AA 12 HOH C 86 686 971 HOH HOH . AA 12 HOH C 87 687 761 HOH HOH . AA 12 HOH C 88 688 769 HOH HOH . AA 12 HOH C 89 689 801 HOH HOH . AA 12 HOH C 90 690 818 HOH HOH . AA 12 HOH C 91 691 837 HOH HOH . AA 12 HOH C 92 692 806 HOH HOH . AA 12 HOH C 93 693 717 HOH HOH . AA 12 HOH C 94 694 800 HOH HOH . AA 12 HOH C 95 695 956 HOH HOH . AA 12 HOH C 96 696 809 HOH HOH . AA 12 HOH C 97 697 31 HOH HOH . AA 12 HOH C 98 698 910 HOH HOH . AA 12 HOH C 99 699 882 HOH HOH . AA 12 HOH C 100 700 733 HOH HOH . AA 12 HOH C 101 701 885 HOH HOH . AA 12 HOH C 102 702 776 HOH HOH . AA 12 HOH C 103 703 901 HOH HOH . AA 12 HOH C 104 704 889 HOH HOH . AA 12 HOH C 105 705 797 HOH HOH . AA 12 HOH C 106 706 923 HOH HOH . AA 12 HOH C 107 707 873 HOH HOH . AA 12 HOH C 108 708 938 HOH HOH . AA 12 HOH C 109 709 762 HOH HOH . AA 12 HOH C 110 710 937 HOH HOH . AA 12 HOH C 111 711 870 HOH HOH . AA 12 HOH C 112 712 877 HOH HOH . AA 12 HOH C 113 713 748 HOH HOH . AA 12 HOH C 114 714 847 HOH HOH . AA 12 HOH C 115 715 887 HOH HOH . AA 12 HOH C 116 716 928 HOH HOH . AA 12 HOH C 117 717 822 HOH HOH . AA 12 HOH C 118 718 787 HOH HOH . AA 12 HOH C 119 719 900 HOH HOH . AA 12 HOH C 120 720 785 HOH HOH . AA 12 HOH C 121 721 667 HOH HOH . AA 12 HOH C 122 722 998 HOH HOH . AA 12 HOH C 123 723 874 HOH HOH . AA 12 HOH C 124 724 972 HOH HOH . AA 12 HOH C 125 725 1016 HOH HOH . AA 12 HOH C 126 726 924 HOH HOH . AA 12 HOH C 127 727 979 HOH HOH . AA 12 HOH C 128 728 821 HOH HOH . AA 12 HOH C 129 729 1002 HOH HOH . AA 12 HOH C 130 730 954 HOH HOH . AA 12 HOH C 131 731 995 HOH HOH . AA 12 HOH C 132 732 903 HOH HOH . AA 12 HOH C 133 733 775 HOH HOH . AA 12 HOH C 134 734 936 HOH HOH . AA 12 HOH C 135 735 991 HOH HOH . AA 12 HOH C 136 736 1001 HOH HOH . AA 12 HOH C 137 737 976 HOH HOH . AA 12 HOH C 138 738 909 HOH HOH . AA 12 HOH C 139 739 986 HOH HOH . AA 12 HOH C 140 740 851 HOH HOH . AA 12 HOH C 141 741 980 HOH HOH . AA 12 HOH C 142 742 1003 HOH HOH . AA 12 HOH C 143 743 1041 HOH HOH . AA 12 HOH C 144 744 999 HOH HOH . AA 12 HOH C 145 745 1000 HOH HOH . AA 12 HOH C 146 746 943 HOH HOH . AA 12 HOH C 147 747 963 HOH HOH . AA 12 HOH C 148 748 1044 HOH HOH . AA 12 HOH C 149 749 1025 HOH HOH . AA 12 HOH C 150 750 1060 HOH HOH . AA 12 HOH C 151 751 1024 HOH HOH . AA 12 HOH C 152 752 1023 HOH HOH . AA 12 HOH C 153 753 1054 HOH HOH . AA 12 HOH C 154 754 973 HOH HOH . AA 12 HOH C 155 755 977 HOH HOH . AA 12 HOH C 156 756 1065 HOH HOH . AA 12 HOH C 157 757 1056 HOH HOH . AA 12 HOH C 158 758 1053 HOH HOH . AA 12 HOH C 159 759 1047 HOH HOH . AA 12 HOH C 160 760 1048 HOH HOH . AA 12 HOH C 161 761 1082 HOH HOH . AA 12 HOH C 162 762 1095 HOH HOH . AA 12 HOH C 163 763 1076 HOH HOH . BA 12 HOH D 1 601 1099 HOH HOH . BA 12 HOH D 2 602 1211 HOH HOH . BA 12 HOH D 3 603 1200 HOH HOH . BA 12 HOH D 4 604 1144 HOH HOH . BA 12 HOH D 5 605 1177 HOH HOH . BA 12 HOH D 6 606 1257 HOH HOH . BA 12 HOH D 7 607 1188 HOH HOH . BA 12 HOH D 8 608 1212 HOH HOH . BA 12 HOH D 9 609 1142 HOH HOH . BA 12 HOH D 10 610 1145 HOH HOH . BA 12 HOH D 11 611 1237 HOH HOH . BA 12 HOH D 12 612 1220 HOH HOH . BA 12 HOH D 13 613 1258 HOH HOH . BA 12 HOH D 14 614 1193 HOH HOH . BA 12 HOH D 15 615 1245 HOH HOH . BA 12 HOH D 16 616 1222 HOH HOH . BA 12 HOH D 17 617 1274 HOH HOH . BA 12 HOH D 18 618 1180 HOH HOH . BA 12 HOH D 19 619 1234 HOH HOH . BA 12 HOH D 20 620 1250 HOH HOH . BA 12 HOH D 21 621 1296 HOH HOH . CA 12 HOH E 1 301 393 HOH HOH . CA 12 HOH E 2 302 1365 HOH HOH . CA 12 HOH E 3 303 1353 HOH HOH . CA 12 HOH E 4 304 1380 HOH HOH . CA 12 HOH E 5 305 1406 HOH HOH . CA 12 HOH E 6 306 577 HOH HOH . CA 12 HOH E 7 307 1304 HOH HOH . DA 12 HOH F 1 501 1133 HOH HOH . DA 12 HOH F 2 502 1485 HOH HOH . DA 12 HOH F 3 503 1544 HOH HOH . DA 12 HOH F 4 504 1506 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 8 18.708 50.057 15.873 1 47.9 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . J 8 18.075 50.999 14.869 1 52.2 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . J 8 19.314 50.859 17.002 1 52.54 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . J 8 19.8 49.244 15.219 1 54.62 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . J 8 17.62 49.03 16.461 1 50.8 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . J 8 16.184 49.521 17.005 1 48.94 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . J 8 15.063 49.316 16.011 1 53.08 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . J 8 16.251 50.969 17.429 1 47.35 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . J 8 16.034 48.526 18.258 1 49.18 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . J 8 14.959 47.602 18.348 1 51.07 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . J 8 14.408 47.694 19.758 1 51.21 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . J 8 13.941 49.028 19.947 1 49.11 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . J 8 13.221 46.776 19.951 1 56.41 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . J 8 13.265 46.294 21.299 1 51.82 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . J 8 12.016 47.669 19.731 1 54.23 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . J 8 10.942 47.278 20.585 1 61.06 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . J 8 12.523 49.049 20.111 1 52.73 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . J 8 11.987 50.141 19.266 1 58.15 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . J 8 12.195 50.322 17.946 1 54.29 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . J 8 11.568 51.446 17.509 1 54.66 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . J 8 10.956 52.011 18.57 1 56.75 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . J 8 10.13 53.209 18.824 1 58.15 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . J 8 9.842 53.991 17.895 1 65.43 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . J 8 9.689 53.43 20.069 1 60.3 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . J 8 9.979 52.605 21.096 1 62.48 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . J 8 9.5 52.895 22.339 1 56.08 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . J 8 10.738 51.488 20.933 1 56.86 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . J 8 11.241 51.149 19.724 1 60.12 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 28 #