data_5S4S # _model_server_result.job_id NdQVzualqI4wiUswBITPvg _model_server_result.datetime_utc '2024-11-07 16:37:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":501}' # _entry.id 5S4S # _exptl.entry_id 5S4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S4S _cell.length_a 105.55 _cell.length_b 164.17 _cell.length_c 173.36 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 K N N ? 9 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 71 A GLU 71 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? metalc ? metalc2 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc3 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc4 H MG MG . A MG 502 1_555 Y O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc5 H MG MG . A MG 502 1_555 Y O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc6 H MG MG . A MG 502 1_555 Y O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc7 H MG MG . A MG 502 1_555 Y O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc8 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc9 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc10 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc11 L MG MG . B MG 502 1_555 Z O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc12 L MG MG . B MG 502 1_555 Z O HOH . B HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc13 L MG MG . B MG 502 1_555 Z O HOH . B HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc14 L MG MG . B MG 502 1_555 AA O HOH . C HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc15 C OD1 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc16 C OD2 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc17 C O THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc18 C OG1 THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc19 C O GLY 44 C GLY 44 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc20 C OE1 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc21 C OE2 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc22 C OE2 GLU 71 C GLU 71 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? metalc ? metalc23 C OD2 ASP 98 C ASP 98 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? metalc ? metalc24 P O1G GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc25 Q MG MG . C MG 502 1_555 AA O HOH . C HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc26 Q MG MG . C MG 502 1_555 AA O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc27 Q MG MG . C MG 502 1_555 AA O HOH . C HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc28 Q MG MG . C MG 502 1_555 AA O HOH . C HOH 662 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? metalc ? metalc29 R CA CA . C CA 503 1_555 AA O HOH . C HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc30 D OE1 GLN 11 D GLN 11 1_555 T MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc31 S O1A GDP . D GDP 501 1_555 T MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc32 W O2B ACP . F ACP 401 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.823 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S4S _atom_sites.fract_transf_matrix[1][1] 0.009474 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006091 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 504 CA CA . J 8 K0M A 1 504 2 K0M DRG . K 9 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 7 CA B 1 503 503 CA CA . N 10 MES B 1 504 504 MES MES . O 8 K0M B 1 505 1 K0M DRG . P 5 GTP C 1 501 501 GTP GTP . Q 6 MG C 1 502 502 MG MG . R 7 CA C 1 503 503 CA CA . S 9 GDP D 1 501 501 GDP GDP . T 6 MG D 1 502 502 MG MG . U 8 K0M D 1 503 3 K0M DRG . V 8 K0M D 1 504 4 K0M DRG . W 11 ACP F 1 401 401 ACP ACP . X 6 MG F 1 402 402 MG MG . Y 12 HOH A 1 601 1392 HOH HOH . Y 12 HOH A 2 602 1395 HOH HOH . Y 12 HOH A 3 603 1394 HOH HOH . Y 12 HOH A 4 604 52 HOH HOH . Y 12 HOH A 5 605 94 HOH HOH . Y 12 HOH A 6 606 1393 HOH HOH . Y 12 HOH A 7 607 167 HOH HOH . Y 12 HOH A 8 608 267 HOH HOH . Y 12 HOH A 9 609 174 HOH HOH . Z 12 HOH B 1 601 509 HOH HOH . Z 12 HOH B 2 602 375 HOH HOH . Z 12 HOH B 3 603 362 HOH HOH . Z 12 HOH B 4 604 361 HOH HOH . Z 12 HOH B 5 605 344 HOH HOH . Z 12 HOH B 6 606 333 HOH HOH . Z 12 HOH B 7 607 423 HOH HOH . Z 12 HOH B 8 608 430 HOH HOH . Z 12 HOH B 9 609 378 HOH HOH . Z 12 HOH B 10 610 453 HOH HOH . Z 12 HOH B 11 611 412 HOH HOH . Z 12 HOH B 12 612 474 HOH HOH . Z 12 HOH B 13 613 432 HOH HOH . Z 12 HOH B 14 614 351 HOH HOH . Z 12 HOH B 15 615 440 HOH HOH . Z 12 HOH B 16 616 405 HOH HOH . Z 12 HOH B 17 617 487 HOH HOH . Z 12 HOH B 18 618 528 HOH HOH . Z 12 HOH B 19 619 817 HOH HOH . Z 12 HOH B 20 620 416 HOH HOH . Z 12 HOH B 21 621 461 HOH HOH . Z 12 HOH B 22 622 422 HOH HOH . Z 12 HOH B 23 623 469 HOH HOH . Z 12 HOH B 24 624 470 HOH HOH . Z 12 HOH B 25 625 481 HOH HOH . Z 12 HOH B 26 626 438 HOH HOH . Z 12 HOH B 27 627 386 HOH HOH . Z 12 HOH B 28 628 364 HOH HOH . Z 12 HOH B 29 629 564 HOH HOH . Z 12 HOH B 30 630 560 HOH HOH . Z 12 HOH B 31 631 559 HOH HOH . Z 12 HOH B 32 632 610 HOH HOH . AA 12 HOH C 1 601 888 HOH HOH . AA 12 HOH C 2 602 658 HOH HOH . AA 12 HOH C 3 603 732 HOH HOH . AA 12 HOH C 4 604 643 HOH HOH . AA 12 HOH C 5 605 669 HOH HOH . AA 12 HOH C 6 606 784 HOH HOH . AA 12 HOH C 7 607 645 HOH HOH . AA 12 HOH C 8 608 647 HOH HOH . AA 12 HOH C 9 609 692 HOH HOH . AA 12 HOH C 10 610 623 HOH HOH . AA 12 HOH C 11 611 799 HOH HOH . AA 12 HOH C 12 612 698 HOH HOH . AA 12 HOH C 13 613 770 HOH HOH . AA 12 HOH C 14 614 641 HOH HOH . AA 12 HOH C 15 615 735 HOH HOH . AA 12 HOH C 16 616 956 HOH HOH . AA 12 HOH C 17 617 660 HOH HOH . AA 12 HOH C 18 618 746 HOH HOH . AA 12 HOH C 19 619 825 HOH HOH . AA 12 HOH C 20 620 800 HOH HOH . AA 12 HOH C 21 621 792 HOH HOH . AA 12 HOH C 22 622 701 HOH HOH . AA 12 HOH C 23 623 819 HOH HOH . AA 12 HOH C 24 624 677 HOH HOH . AA 12 HOH C 25 625 839 HOH HOH . AA 12 HOH C 26 626 676 HOH HOH . AA 12 HOH C 27 627 716 HOH HOH . AA 12 HOH C 28 628 843 HOH HOH . AA 12 HOH C 29 629 902 HOH HOH . AA 12 HOH C 30 630 714 HOH HOH . AA 12 HOH C 31 631 763 HOH HOH . AA 12 HOH C 32 632 747 HOH HOH . AA 12 HOH C 33 633 659 HOH HOH . AA 12 HOH C 34 634 909 HOH HOH . AA 12 HOH C 35 635 733 HOH HOH . AA 12 HOH C 36 636 638 HOH HOH . AA 12 HOH C 37 637 833 HOH HOH . AA 12 HOH C 38 638 859 HOH HOH . AA 12 HOH C 39 639 811 HOH HOH . AA 12 HOH C 40 640 730 HOH HOH . AA 12 HOH C 41 641 721 HOH HOH . AA 12 HOH C 42 642 924 HOH HOH . AA 12 HOH C 43 643 782 HOH HOH . AA 12 HOH C 44 644 761 HOH HOH . AA 12 HOH C 45 645 797 HOH HOH . AA 12 HOH C 46 646 689 HOH HOH . AA 12 HOH C 47 647 953 HOH HOH . AA 12 HOH C 48 648 753 HOH HOH . AA 12 HOH C 49 649 650 HOH HOH . AA 12 HOH C 50 650 719 HOH HOH . AA 12 HOH C 51 651 741 HOH HOH . AA 12 HOH C 52 652 840 HOH HOH . AA 12 HOH C 53 653 683 HOH HOH . AA 12 HOH C 54 654 739 HOH HOH . AA 12 HOH C 55 655 806 HOH HOH . AA 12 HOH C 56 656 670 HOH HOH . AA 12 HOH C 57 657 807 HOH HOH . AA 12 HOH C 58 658 634 HOH HOH . AA 12 HOH C 59 659 723 HOH HOH . AA 12 HOH C 60 660 762 HOH HOH . AA 12 HOH C 61 661 913 HOH HOH . AA 12 HOH C 62 662 667 HOH HOH . AA 12 HOH C 63 663 954 HOH HOH . AA 12 HOH C 64 664 955 HOH HOH . AA 12 HOH C 65 665 868 HOH HOH . AA 12 HOH C 66 666 874 HOH HOH . AA 12 HOH C 67 667 664 HOH HOH . AA 12 HOH C 68 668 936 HOH HOH . AA 12 HOH C 69 669 887 HOH HOH . AA 12 HOH C 70 670 923 HOH HOH . AA 12 HOH C 71 671 886 HOH HOH . AA 12 HOH C 72 672 872 HOH HOH . AA 12 HOH C 73 673 757 HOH HOH . AA 12 HOH C 74 674 1007 HOH HOH . AA 12 HOH C 75 675 801 HOH HOH . AA 12 HOH C 76 676 977 HOH HOH . AA 12 HOH C 77 677 803 HOH HOH . AA 12 HOH C 78 678 484 HOH HOH . AA 12 HOH C 79 679 971 HOH HOH . AA 12 HOH C 80 680 928 HOH HOH . AA 12 HOH C 81 681 864 HOH HOH . AA 12 HOH C 82 682 877 HOH HOH . AA 12 HOH C 83 683 882 HOH HOH . AA 12 HOH C 84 684 834 HOH HOH . AA 12 HOH C 85 685 991 HOH HOH . AA 12 HOH C 86 686 775 HOH HOH . AA 12 HOH C 87 687 776 HOH HOH . AA 12 HOH C 88 688 710 HOH HOH . AA 12 HOH C 89 689 1000 HOH HOH . AA 12 HOH C 90 690 751 HOH HOH . AA 12 HOH C 91 691 938 HOH HOH . AA 12 HOH C 92 692 1024 HOH HOH . AA 12 HOH C 93 693 986 HOH HOH . AA 12 HOH C 94 694 979 HOH HOH . AA 12 HOH C 95 695 972 HOH HOH . AA 12 HOH C 96 696 808 HOH HOH . AA 12 HOH C 97 697 903 HOH HOH . AA 12 HOH C 98 698 813 HOH HOH . AA 12 HOH C 99 699 1027 HOH HOH . AA 12 HOH C 100 700 847 HOH HOH . AA 12 HOH C 101 701 1012 HOH HOH . AA 12 HOH C 102 702 976 HOH HOH . AA 12 HOH C 103 703 1016 HOH HOH . AA 12 HOH C 104 704 963 HOH HOH . AA 12 HOH C 105 705 717 HOH HOH . AA 12 HOH C 106 706 943 HOH HOH . AA 12 HOH C 107 707 1065 HOH HOH . AA 12 HOH C 108 708 1002 HOH HOH . AA 12 HOH C 109 709 1048 HOH HOH . AA 12 HOH C 110 710 1044 HOH HOH . AA 12 HOH C 111 711 1053 HOH HOH . AA 12 HOH C 112 712 1056 HOH HOH . AA 12 HOH C 113 713 605 HOH HOH . BA 12 HOH D 1 601 1211 HOH HOH . BA 12 HOH D 2 602 1120 HOH HOH . BA 12 HOH D 3 603 1101 HOH HOH . BA 12 HOH D 4 604 1217 HOH HOH . BA 12 HOH D 5 605 1202 HOH HOH . BA 12 HOH D 6 606 1191 HOH HOH . BA 12 HOH D 7 607 1220 HOH HOH . BA 12 HOH D 8 608 1144 HOH HOH . BA 12 HOH D 9 609 1188 HOH HOH . BA 12 HOH D 10 610 1258 HOH HOH . BA 12 HOH D 11 611 1142 HOH HOH . BA 12 HOH D 12 612 744 HOH HOH . BA 12 HOH D 13 613 1212 HOH HOH . BA 12 HOH D 14 614 1222 HOH HOH . BA 12 HOH D 15 615 1234 HOH HOH . BA 12 HOH D 16 616 1180 HOH HOH . BA 12 HOH D 17 617 1059 HOH HOH . CA 12 HOH E 1 201 379 HOH HOH . CA 12 HOH E 2 202 551 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . S 9 26.976 -7.078 -44.725 1 78.36 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . S 9 27.843 -7.813 -45.718 1 87.42 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . S 9 27.881 -6.318 -43.786 1 87.92 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . S 9 26.061 -6.112 -45.442 1 83.11 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . S 9 26.107 -8.124 -43.864 1 85.51 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . S 9 24.508 -8.283 -44.022 1 84.18 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . S 9 24.135 -8.946 -45.326 1 90.41 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . S 9 23.813 -6.947 -43.888 1 75.56 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . S 9 24.161 -9.235 -42.771 1 82.78 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . S 9 23.189 -10.27 -42.874 1 83.6 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . S 9 22.302 -10.262 -41.636 1 78.36 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . S 9 21.641 -8.998 -41.562 1 73.31 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . S 9 21.223 -11.322 -41.748 1 81.42 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . S 9 21.092 -11.995 -40.493 1 82.44 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . S 9 19.95 -10.573 -42.087 1 79.66 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . S 9 18.841 -11.129 -41.38 1 88.18 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . S 9 20.22 -9.152 -41.626 1 81.26 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . S 9 19.667 -8.121 -42.542 1 86.33 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . S 9 20.207 -7.741 -43.713 1 81.65 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . S 9 19.472 -6.76 -44.297 1 81.28 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . S 9 18.438 -6.489 -43.482 1 82.14 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . S 9 17.285 -5.559 -43.493 1 80.4 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . S 9 17.101 -4.766 -44.439 1 80.87 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . S 9 16.443 -5.592 -42.454 1 88.77 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . S 9 16.612 -6.433 -41.417 1 85.11 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . S 9 15.71 -6.399 -40.408 1 80.22 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . S 9 17.646 -7.311 -41.341 1 82.46 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . S 9 18.573 -7.385 -42.325 1 85.33 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 28 #