data_5S4X # _model_server_result.job_id y2bWtFrXzklEtAgJlAIg1Q _model_server_result.datetime_utc '2024-11-07 16:50:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s4x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 5S4X # _exptl.entry_id 5S4X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S4X _cell.length_a 105.11 _cell.length_b 159.22 _cell.length_c 180.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S4X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.013 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.095 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc10 H MG MG . A MG 502 1_555 Y O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc11 H MG MG . A MG 502 1_555 Y O HOH . A HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc12 H MG MG . A MG 502 1_555 Y O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc13 H MG MG . A MG 502 1_555 Y O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc14 J CA CA . A CA 504 1_555 Y O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.173 ? metalc ? metalc15 J CA CA . A CA 504 1_555 Y O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc16 J CA CA . A CA 504 1_555 CA O HOH . E HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc17 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc18 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc19 B OE2 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc20 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc21 L MG MG . B MG 502 1_555 Z O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.796 ? metalc ? metalc22 L MG MG . B MG 502 1_555 Z O HOH . B HOH 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc23 L MG MG . B MG 502 1_555 Z O HOH . B HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc24 L MG MG . B MG 502 1_555 AA O HOH . C HOH 645 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc25 C OD1 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc26 C OD2 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc27 C O THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc28 C OG1 THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc29 C O GLY 44 C GLY 44 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc30 C OE1 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? metalc ? metalc31 C OE2 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc32 Q O1G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc33 R MG MG . C MG 502 1_555 AA O HOH . C HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc34 R MG MG . C MG 502 1_555 AA O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc35 R MG MG . C MG 502 1_555 AA O HOH . C HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc36 D OE1 GLN 11 D GLN 11 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc37 T O1A GDP . D GDP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc38 U MG MG . D MG 502 1_555 BA O HOH . D HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc39 F OE2 GLU 331 F GLU 331 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc40 F OD1 ASN 333 F ASN 333 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc41 W O3G ACP . F ACP 401 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc42 W O1B ACP . F ACP 401 1_555 X MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S4X _atom_sites.fract_transf_matrix[1][1] 0.009514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006281 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 7 CA B 1 503 503 CA CA . N 9 MES B 1 504 504 MES MES . O 10 JHD B 1 505 601 JHD DRG . P 10 JHD B 1 506 701 JHD DRG . Q 5 GTP C 1 501 501 GTP GTP . R 6 MG C 1 502 502 MG MG . S 7 CA C 1 503 503 CA CA . T 8 GDP D 1 501 501 GDP GDP . U 6 MG D 1 502 502 MG MG . V 10 JHD D 1 503 601 JHD DRG . W 11 ACP F 1 401 401 ACP ACP . X 6 MG F 1 402 402 MG MG . Y 12 HOH A 1 601 60 HOH HOH . Y 12 HOH A 2 602 459 HOH HOH . Y 12 HOH A 3 603 29 HOH HOH . Y 12 HOH A 4 604 47 HOH HOH . Y 12 HOH A 5 605 97 HOH HOH . Y 12 HOH A 6 606 83 HOH HOH . Y 12 HOH A 7 607 81 HOH HOH . Y 12 HOH A 8 608 126 HOH HOH . Y 12 HOH A 9 609 78 HOH HOH . Y 12 HOH A 10 610 116 HOH HOH . Y 12 HOH A 11 611 65 HOH HOH . Y 12 HOH A 12 612 135 HOH HOH . Y 12 HOH A 13 613 40 HOH HOH . Y 12 HOH A 14 614 161 HOH HOH . Y 12 HOH A 15 615 35 HOH HOH . Y 12 HOH A 16 616 106 HOH HOH . Y 12 HOH A 17 617 174 HOH HOH . Y 12 HOH A 18 618 258 HOH HOH . Y 12 HOH A 19 619 180 HOH HOH . Y 12 HOH A 20 620 263 HOH HOH . Y 12 HOH A 21 621 191 HOH HOH . Y 12 HOH A 22 622 213 HOH HOH . Y 12 HOH A 23 623 228 HOH HOH . Y 12 HOH A 24 624 267 HOH HOH . Y 12 HOH A 25 625 196 HOH HOH . Y 12 HOH A 26 626 194 HOH HOH . Y 12 HOH A 27 627 295 HOH HOH . Z 12 HOH B 1 601 333 HOH HOH . Z 12 HOH B 2 602 331 HOH HOH . Z 12 HOH B 3 603 335 HOH HOH . Z 12 HOH B 4 604 487 HOH HOH . Z 12 HOH B 5 605 362 HOH HOH . Z 12 HOH B 6 606 378 HOH HOH . Z 12 HOH B 7 607 428 HOH HOH . Z 12 HOH B 8 608 423 HOH HOH . Z 12 HOH B 9 609 351 HOH HOH . Z 12 HOH B 10 610 454 HOH HOH . Z 12 HOH B 11 611 432 HOH HOH . Z 12 HOH B 12 612 502 HOH HOH . Z 12 HOH B 13 613 201 HOH HOH . Z 12 HOH B 14 614 405 HOH HOH . Z 12 HOH B 15 615 440 HOH HOH . Z 12 HOH B 16 616 526 HOH HOH . Z 12 HOH B 17 617 387 HOH HOH . Z 12 HOH B 18 618 1362 HOH HOH . Z 12 HOH B 19 619 330 HOH HOH . Z 12 HOH B 20 620 493 HOH HOH . Z 12 HOH B 21 621 412 HOH HOH . Z 12 HOH B 22 622 469 HOH HOH . Z 12 HOH B 23 623 505 HOH HOH . Z 12 HOH B 24 624 438 HOH HOH . Z 12 HOH B 25 625 436 HOH HOH . Z 12 HOH B 26 626 390 HOH HOH . Z 12 HOH B 27 627 540 HOH HOH . Z 12 HOH B 28 628 534 HOH HOH . Z 12 HOH B 29 629 290 HOH HOH . Z 12 HOH B 30 630 479 HOH HOH . Z 12 HOH B 31 631 345 HOH HOH . Z 12 HOH B 32 632 596 HOH HOH . AA 12 HOH C 1 601 888 HOH HOH . AA 12 HOH C 2 602 660 HOH HOH . AA 12 HOH C 3 603 623 HOH HOH . AA 12 HOH C 4 604 792 HOH HOH . AA 12 HOH C 5 605 732 HOH HOH . AA 12 HOH C 6 606 669 HOH HOH . AA 12 HOH C 7 607 770 HOH HOH . AA 12 HOH C 8 608 659 HOH HOH . AA 12 HOH C 9 609 800 HOH HOH . AA 12 HOH C 10 610 782 HOH HOH . AA 12 HOH C 11 611 723 HOH HOH . AA 12 HOH C 12 612 742 HOH HOH . AA 12 HOH C 13 613 664 HOH HOH . AA 12 HOH C 14 614 746 HOH HOH . AA 12 HOH C 15 615 894 HOH HOH . AA 12 HOH C 16 616 789 HOH HOH . AA 12 HOH C 17 617 868 HOH HOH . AA 12 HOH C 18 618 714 HOH HOH . AA 12 HOH C 19 619 750 HOH HOH . AA 12 HOH C 20 620 677 HOH HOH . AA 12 HOH C 21 621 705 HOH HOH . AA 12 HOH C 22 622 31 HOH HOH . AA 12 HOH C 23 623 748 HOH HOH . AA 12 HOH C 24 624 687 HOH HOH . AA 12 HOH C 25 625 757 HOH HOH . AA 12 HOH C 26 626 749 HOH HOH . AA 12 HOH C 27 627 764 HOH HOH . AA 12 HOH C 28 628 840 HOH HOH . AA 12 HOH C 29 629 694 HOH HOH . AA 12 HOH C 30 630 818 HOH HOH . AA 12 HOH C 31 631 797 HOH HOH . AA 12 HOH C 32 632 880 HOH HOH . AA 12 HOH C 33 633 738 HOH HOH . AA 12 HOH C 34 634 817 HOH HOH . AA 12 HOH C 35 635 906 HOH HOH . AA 12 HOH C 36 636 811 HOH HOH . AA 12 HOH C 37 637 882 HOH HOH . AA 12 HOH C 38 638 719 HOH HOH . AA 12 HOH C 39 639 953 HOH HOH . AA 12 HOH C 40 640 787 HOH HOH . AA 12 HOH C 41 641 963 HOH HOH . AA 12 HOH C 42 642 776 HOH HOH . AA 12 HOH C 43 643 717 HOH HOH . AA 12 HOH C 44 644 785 HOH HOH . AA 12 HOH C 45 645 721 HOH HOH . AA 12 HOH C 46 646 733 HOH HOH . AA 12 HOH C 47 647 909 HOH HOH . AA 12 HOH C 48 648 928 HOH HOH . AA 12 HOH C 49 649 859 HOH HOH . AA 12 HOH C 50 650 979 HOH HOH . AA 12 HOH C 51 651 913 HOH HOH . AA 12 HOH C 52 652 1016 HOH HOH . AA 12 HOH C 53 653 873 HOH HOH . AA 12 HOH C 54 654 885 HOH HOH . AA 12 HOH C 55 655 874 HOH HOH . AA 12 HOH C 56 656 775 HOH HOH . AA 12 HOH C 57 657 938 HOH HOH . AA 12 HOH C 58 658 848 HOH HOH . AA 12 HOH C 59 659 822 HOH HOH . AA 12 HOH C 60 660 747 HOH HOH . AA 12 HOH C 61 661 937 HOH HOH . AA 12 HOH C 62 662 852 HOH HOH . AA 12 HOH C 63 663 877 HOH HOH . AA 12 HOH C 64 664 949 HOH HOH . AA 12 HOH C 65 665 1054 HOH HOH . AA 12 HOH C 66 666 830 HOH HOH . AA 12 HOH C 67 667 956 HOH HOH . AA 12 HOH C 68 668 972 HOH HOH . AA 12 HOH C 69 669 995 HOH HOH . AA 12 HOH C 70 670 1000 HOH HOH . AA 12 HOH C 71 671 1001 HOH HOH . AA 12 HOH C 72 672 903 HOH HOH . AA 12 HOH C 73 673 924 HOH HOH . AA 12 HOH C 74 674 943 HOH HOH . AA 12 HOH C 75 675 991 HOH HOH . AA 12 HOH C 76 676 923 HOH HOH . AA 12 HOH C 77 677 977 HOH HOH . AA 12 HOH C 78 678 1002 HOH HOH . AA 12 HOH C 79 679 1024 HOH HOH . AA 12 HOH C 80 680 1023 HOH HOH . AA 12 HOH C 81 681 1090 HOH HOH . AA 12 HOH C 82 682 936 HOH HOH . AA 12 HOH C 83 683 1065 HOH HOH . BA 12 HOH D 1 601 1220 HOH HOH . BA 12 HOH D 2 602 1144 HOH HOH . BA 12 HOH D 3 603 1099 HOH HOH . BA 12 HOH D 4 604 1200 HOH HOH . BA 12 HOH D 5 605 1188 HOH HOH . BA 12 HOH D 6 606 1257 HOH HOH . BA 12 HOH D 7 607 1288 HOH HOH . BA 12 HOH D 8 608 1222 HOH HOH . BA 12 HOH D 9 609 1180 HOH HOH . CA 12 HOH E 1 201 1334 HOH HOH . CA 12 HOH E 2 202 379 HOH HOH . CA 12 HOH E 3 203 551 HOH HOH . DA 12 HOH F 1 501 1544 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . K 8 18.526 49.966 15.805 1 60.59 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . K 8 17.891 50.85 14.759 1 63.47 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . K 8 19.15 50.786 16.914 1 60.22 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . K 8 19.597 49.127 15.156 1 70.94 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . K 8 17.441 48.968 16.445 1 65.52 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . K 8 16.014 49.474 16.994 1 60.67 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . K 8 14.896 49.268 16.002 1 66.19 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . K 8 16.066 50.926 17.41 1 58.95 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . K 8 15.872 48.483 18.254 1 60.65 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . K 8 14.76 47.606 18.36 1 63.6 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . K 8 14.244 47.622 19.788 1 66.75 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . K 8 13.769 48.939 20.061 1 57.67 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . K 8 13.061 46.687 19.923 1 67.62 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . K 8 13.006 46.2 21.268 1 64.36 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . K 8 11.875 47.575 19.633 1 63.15 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . K 8 10.723 47.122 20.345 1 68.95 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . K 8 12.341 48.937 20.124 1 67.62 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . K 8 11.825 50.039 19.282 1 66.69 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . K 8 12.054 50.222 17.97 1 64.9 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . K 8 11.433 51.344 17.526 1 63.77 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . K 8 10.804 51.9 18.576 1 61.43 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . K 8 9.972 53.097 18.813 1 65.72 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . K 8 9.704 53.877 17.88 1 72.87 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . K 8 9.511 53.316 20.052 1 72.5 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . K 8 9.785 52.488 21.079 1 68.9 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . K 8 9.279 52.777 22.304 1 65 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . K 8 10.545 51.373 20.933 1 67.37 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . K 8 11.068 51.038 19.73 1 67.41 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #