data_5S4Y # _model_server_result.job_id bDL91u5_hpSL0QOXr2YnZQ _model_server_result.datetime_utc '2024-11-07 16:27:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":501}' # _entry.id 5S4Y # _exptl.entry_id 5S4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S4Y _cell.length_a 104.14 _cell.length_b 157.78 _cell.length_c 178.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc10 H MG MG . A MG 502 1_555 W O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc11 H MG MG . A MG 502 1_555 W O HOH . A HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc12 H MG MG . A MG 502 1_555 W O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc13 H MG MG . A MG 502 1_555 W O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc14 I CA CA . A CA 503 1_555 W O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc15 J CA CA . A CA 504 1_555 W O HOH . A HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.018 ? metalc ? metalc16 J CA CA . A CA 504 1_555 AA O HOH . E HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc17 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc18 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc19 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc20 L MG MG . B MG 502 1_555 X O HOH . B HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc21 L MG MG . B MG 502 1_555 X O HOH . B HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc22 L MG MG . B MG 502 1_555 Y O HOH . C HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc23 C OD1 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc24 C OD2 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc25 C O THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc26 C OG1 THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc27 C O GLY 44 C GLY 44 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc28 C OE1 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc29 C OE2 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc30 P O1G GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? metalc ? metalc31 P O1B GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc32 Q MG MG . C MG 502 1_555 Y O HOH . C HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc33 Q MG MG . C MG 502 1_555 Y O HOH . C HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc34 Q MG MG . C MG 502 1_555 Y O HOH . C HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc35 Q MG MG . C MG 502 1_555 Y O HOH . C HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc36 R CA CA . C CA 503 1_555 Y O HOH . C HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc37 D OE1 GLN 11 D GLN 11 1_555 T MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc38 S O1A GDP . D GDP 501 1_555 T MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc39 T MG MG . D MG 502 1_555 Z O HOH . D HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc40 F OE1 GLU 331 F GLU 331 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc41 F OE2 GLU 331 F GLU 331 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc42 F OD1 ASN 333 F ASN 333 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc43 U O3G ACP . F ACP 401 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc44 U O1B ACP . F ACP 401 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S4Y _atom_sites.fract_transf_matrix[1][1] 0.009602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 7 CA B 1 503 503 CA CA . N 9 NSJ B 1 504 1 NSJ DRG . O 9 NSJ B 1 505 2 NSJ DRG . P 5 GTP C 1 501 501 GTP GTP . Q 6 MG C 1 502 502 MG MG . R 7 CA C 1 503 503 CA CA . S 8 GDP D 1 501 501 GDP GDP . T 6 MG D 1 502 502 MG MG . U 10 ACP F 1 401 401 ACP ACP . V 6 MG F 1 402 402 MG MG . W 11 HOH A 1 601 194 HOH HOH . W 11 HOH A 2 602 47 HOH HOH . W 11 HOH A 3 603 9 HOH HOH . W 11 HOH A 4 604 25 HOH HOH . W 11 HOH A 5 605 88 HOH HOH . W 11 HOH A 6 606 220 HOH HOH . W 11 HOH A 7 607 1558 HOH HOH . W 11 HOH A 8 608 434 HOH HOH . W 11 HOH A 9 609 83 HOH HOH . W 11 HOH A 10 610 52 HOH HOH . W 11 HOH A 11 611 40 HOH HOH . W 11 HOH A 12 612 65 HOH HOH . W 11 HOH A 13 613 29 HOH HOH . W 11 HOH A 14 614 137 HOH HOH . W 11 HOH A 15 615 104 HOH HOH . W 11 HOH A 16 616 78 HOH HOH . W 11 HOH A 17 617 87 HOH HOH . W 11 HOH A 18 618 22 HOH HOH . W 11 HOH A 19 619 109 HOH HOH . W 11 HOH A 20 620 106 HOH HOH . W 11 HOH A 21 621 151 HOH HOH . W 11 HOH A 22 622 1556 HOH HOH . W 11 HOH A 23 623 123 HOH HOH . W 11 HOH A 24 624 135 HOH HOH . W 11 HOH A 25 625 140 HOH HOH . W 11 HOH A 26 626 174 HOH HOH . W 11 HOH A 27 627 152 HOH HOH . W 11 HOH A 28 628 180 HOH HOH . W 11 HOH A 29 629 35 HOH HOH . W 11 HOH A 30 630 94 HOH HOH . W 11 HOH A 31 631 161 HOH HOH . W 11 HOH A 32 632 93 HOH HOH . W 11 HOH A 33 633 198 HOH HOH . W 11 HOH A 34 634 257 HOH HOH . W 11 HOH A 35 635 60 HOH HOH . W 11 HOH A 36 636 43 HOH HOH . W 11 HOH A 37 637 267 HOH HOH . W 11 HOH A 38 638 1557 HOH HOH . W 11 HOH A 39 639 125 HOH HOH . W 11 HOH A 40 640 719 HOH HOH . W 11 HOH A 41 641 191 HOH HOH . W 11 HOH A 42 642 213 HOH HOH . W 11 HOH A 43 643 258 HOH HOH . W 11 HOH A 44 644 1555 HOH HOH . W 11 HOH A 45 645 203 HOH HOH . W 11 HOH A 46 646 273 HOH HOH . W 11 HOH A 47 647 526 HOH HOH . W 11 HOH A 48 648 263 HOH HOH . W 11 HOH A 49 649 290 HOH HOH . W 11 HOH A 50 650 249 HOH HOH . W 11 HOH A 51 651 363 HOH HOH . X 11 HOH B 1 601 316 HOH HOH . X 11 HOH B 2 602 335 HOH HOH . X 11 HOH B 3 603 428 HOH HOH . X 11 HOH B 4 604 351 HOH HOH . X 11 HOH B 5 605 378 HOH HOH . X 11 HOH B 6 606 362 HOH HOH . X 11 HOH B 7 607 423 HOH HOH . X 11 HOH B 8 608 454 HOH HOH . X 11 HOH B 9 609 375 HOH HOH . X 11 HOH B 10 610 1559 HOH HOH . X 11 HOH B 11 611 442 HOH HOH . X 11 HOH B 12 612 416 HOH HOH . X 11 HOH B 13 613 430 HOH HOH . X 11 HOH B 14 614 432 HOH HOH . X 11 HOH B 15 615 1362 HOH HOH . X 11 HOH B 16 616 387 HOH HOH . X 11 HOH B 17 617 412 HOH HOH . X 11 HOH B 18 618 517 HOH HOH . X 11 HOH B 19 619 481 HOH HOH . X 11 HOH B 20 620 358 HOH HOH . X 11 HOH B 21 621 451 HOH HOH . X 11 HOH B 22 622 487 HOH HOH . X 11 HOH B 23 623 345 HOH HOH . X 11 HOH B 24 624 427 HOH HOH . X 11 HOH B 25 625 438 HOH HOH . X 11 HOH B 26 626 405 HOH HOH . X 11 HOH B 27 627 479 HOH HOH . X 11 HOH B 28 628 528 HOH HOH . X 11 HOH B 29 629 372 HOH HOH . X 11 HOH B 30 630 407 HOH HOH . X 11 HOH B 31 631 503 HOH HOH . X 11 HOH B 32 632 557 HOH HOH . X 11 HOH B 33 633 577 HOH HOH . X 11 HOH B 34 634 327 HOH HOH . X 11 HOH B 35 635 436 HOH HOH . Y 11 HOH C 1 601 641 HOH HOH . Y 11 HOH C 2 602 647 HOH HOH . Y 11 HOH C 3 603 622 HOH HOH . Y 11 HOH C 4 604 645 HOH HOH . Y 11 HOH C 5 605 660 HOH HOH . Y 11 HOH C 6 606 746 HOH HOH . Y 11 HOH C 7 607 698 HOH HOH . Y 11 HOH C 8 608 792 HOH HOH . Y 11 HOH C 9 609 669 HOH HOH . Y 11 HOH C 10 610 748 HOH HOH . Y 11 HOH C 11 611 742 HOH HOH . Y 11 HOH C 12 612 664 HOH HOH . Y 11 HOH C 13 613 692 HOH HOH . Y 11 HOH C 14 614 796 HOH HOH . Y 11 HOH C 15 615 819 HOH HOH . Y 11 HOH C 16 616 705 HOH HOH . Y 11 HOH C 17 617 757 HOH HOH . Y 11 HOH C 18 618 753 HOH HOH . Y 11 HOH C 19 619 744 HOH HOH . Y 11 HOH C 20 620 770 HOH HOH . Y 11 HOH C 21 621 687 HOH HOH . Y 11 HOH C 22 622 803 HOH HOH . Y 11 HOH C 23 623 735 HOH HOH . Y 11 HOH C 24 624 764 HOH HOH . Y 11 HOH C 25 625 676 HOH HOH . Y 11 HOH C 26 626 725 HOH HOH . Y 11 HOH C 27 627 829 HOH HOH . Y 11 HOH C 28 628 789 HOH HOH . Y 11 HOH C 29 629 717 HOH HOH . Y 11 HOH C 30 630 679 HOH HOH . Y 11 HOH C 31 631 710 HOH HOH . Y 11 HOH C 32 632 887 HOH HOH . Y 11 HOH C 33 633 782 HOH HOH . Y 11 HOH C 34 634 716 HOH HOH . Y 11 HOH C 35 635 732 HOH HOH . Y 11 HOH C 36 636 859 HOH HOH . Y 11 HOH C 37 637 714 HOH HOH . Y 11 HOH C 38 638 784 HOH HOH . Y 11 HOH C 39 639 659 HOH HOH . Y 11 HOH C 40 640 629 HOH HOH . Y 11 HOH C 41 641 818 HOH HOH . Y 11 HOH C 42 642 763 HOH HOH . Y 11 HOH C 43 643 931 HOH HOH . Y 11 HOH C 44 644 677 HOH HOH . Y 11 HOH C 45 645 740 HOH HOH . Y 11 HOH C 46 646 839 HOH HOH . Y 11 HOH C 47 647 880 HOH HOH . Y 11 HOH C 48 648 723 HOH HOH . Y 11 HOH C 49 649 747 HOH HOH . Y 11 HOH C 50 650 991 HOH HOH . Y 11 HOH C 51 651 701 HOH HOH . Y 11 HOH C 52 652 721 HOH HOH . Y 11 HOH C 53 653 889 HOH HOH . Y 11 HOH C 54 654 739 HOH HOH . Y 11 HOH C 55 655 888 HOH HOH . Y 11 HOH C 56 656 809 HOH HOH . Y 11 HOH C 57 657 797 HOH HOH . Y 11 HOH C 58 658 910 HOH HOH . Y 11 HOH C 59 659 840 HOH HOH . Y 11 HOH C 60 660 877 HOH HOH . Y 11 HOH C 61 661 811 HOH HOH . Y 11 HOH C 62 662 882 HOH HOH . Y 11 HOH C 63 663 835 HOH HOH . Y 11 HOH C 64 664 817 HOH HOH . Y 11 HOH C 65 665 971 HOH HOH . Y 11 HOH C 66 666 822 HOH HOH . Y 11 HOH C 67 667 906 HOH HOH . Y 11 HOH C 68 668 733 HOH HOH . Y 11 HOH C 69 669 868 HOH HOH . Y 11 HOH C 70 670 773 HOH HOH . Y 11 HOH C 71 671 670 HOH HOH . Y 11 HOH C 72 672 806 HOH HOH . Y 11 HOH C 73 673 761 HOH HOH . Y 11 HOH C 74 674 848 HOH HOH . Y 11 HOH C 75 675 1002 HOH HOH . Y 11 HOH C 76 676 800 HOH HOH . Y 11 HOH C 77 677 995 HOH HOH . Y 11 HOH C 78 678 737 HOH HOH . Y 11 HOH C 79 679 843 HOH HOH . Y 11 HOH C 80 680 924 HOH HOH . Y 11 HOH C 81 681 979 HOH HOH . Y 11 HOH C 82 682 833 HOH HOH . Y 11 HOH C 83 683 874 HOH HOH . Y 11 HOH C 84 684 762 HOH HOH . Y 11 HOH C 85 685 837 HOH HOH . Y 11 HOH C 86 686 953 HOH HOH . Y 11 HOH C 87 687 873 HOH HOH . Y 11 HOH C 88 688 913 HOH HOH . Y 11 HOH C 89 689 751 HOH HOH . Y 11 HOH C 90 690 775 HOH HOH . Y 11 HOH C 91 691 909 HOH HOH . Y 11 HOH C 92 692 956 HOH HOH . Y 11 HOH C 93 693 830 HOH HOH . Y 11 HOH C 94 694 901 HOH HOH . Y 11 HOH C 95 695 986 HOH HOH . Y 11 HOH C 96 696 923 HOH HOH . Y 11 HOH C 97 697 903 HOH HOH . Y 11 HOH C 98 698 976 HOH HOH . Y 11 HOH C 99 699 1007 HOH HOH . Y 11 HOH C 100 700 898 HOH HOH . Y 11 HOH C 101 701 928 HOH HOH . Y 11 HOH C 102 702 1000 HOH HOH . Y 11 HOH C 103 703 999 HOH HOH . Y 11 HOH C 104 704 938 HOH HOH . Y 11 HOH C 105 705 954 HOH HOH . Y 11 HOH C 106 706 977 HOH HOH . Y 11 HOH C 107 707 1024 HOH HOH . Y 11 HOH C 108 708 973 HOH HOH . Y 11 HOH C 109 709 1048 HOH HOH . Y 11 HOH C 110 710 1012 HOH HOH . Y 11 HOH C 111 711 1089 HOH HOH . Y 11 HOH C 112 712 1047 HOH HOH . Y 11 HOH C 113 713 1044 HOH HOH . Y 11 HOH C 114 714 936 HOH HOH . Y 11 HOH C 115 715 1094 HOH HOH . Y 11 HOH C 116 716 1095 HOH HOH . Z 11 HOH D 1 601 1200 HOH HOH . Z 11 HOH D 2 602 1099 HOH HOH . Z 11 HOH D 3 603 1101 HOH HOH . Z 11 HOH D 4 604 1178 HOH HOH . Z 11 HOH D 5 605 1211 HOH HOH . Z 11 HOH D 6 606 172 HOH HOH . Z 11 HOH D 7 607 696 HOH HOH . Z 11 HOH D 8 608 1144 HOH HOH . Z 11 HOH D 9 609 1258 HOH HOH . Z 11 HOH D 10 610 1177 HOH HOH . Z 11 HOH D 11 611 1220 HOH HOH . Z 11 HOH D 12 612 1237 HOH HOH . Z 11 HOH D 13 613 1166 HOH HOH . Z 11 HOH D 14 614 1257 HOH HOH . Z 11 HOH D 15 615 1245 HOH HOH . Z 11 HOH D 16 616 1274 HOH HOH . AA 11 HOH E 1 201 1334 HOH HOH . AA 11 HOH E 2 202 379 HOH HOH . AA 11 HOH E 3 203 551 HOH HOH . AA 11 HOH E 4 204 1406 HOH HOH . AA 11 HOH E 5 205 1554 HOH HOH . BA 11 HOH F 1 501 1485 HOH HOH . BA 11 HOH F 2 502 1473 HOH HOH . BA 11 HOH F 3 503 1544 HOH HOH . BA 11 HOH F 4 504 1462 HOH HOH . BA 11 HOH F 5 505 1475 HOH HOH . BA 11 HOH F 6 506 1484 HOH HOH . BA 11 HOH F 7 507 1458 HOH HOH . BA 11 HOH F 8 508 1537 HOH HOH . BA 11 HOH F 9 509 1513 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . S 8 25.906 -10.01 -43.503 1 74.88 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . S 8 25.165 -9.42 -44.681 1 77.02 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . S 8 26.692 -8.923 -42.812 1 87.33 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . S 8 26.865 -11.086 -43.949 1 88.61 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . S 8 24.875 -10.633 -42.442 1 89.07 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . S 8 23.413 -11.149 -42.859 1 80.4 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . S 8 23.465 -12.04 -44.075 1 103.49 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . S 8 22.491 -9.979 -43.1 1 77.58 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . S 8 22.974 -11.972 -41.546 1 81.79 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . S 8 22.15 -13.126 -41.643 1 81.89 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . S 8 21.218 -13.161 -40.444 1 86.19 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . S 8 20.525 -11.916 -40.412 1 79.83 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . S 8 20.172 -14.249 -40.593 1 91.66 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . S 8 19.98 -14.89 -39.329 1 90.55 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . S 8 18.903 -13.536 -41.007 1 87.16 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . S 8 17.764 -14.112 -40.363 1 96.5 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . S 8 19.118 -12.104 -40.555 1 77.93 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . S 8 18.629 -11.129 -41.556 1 81.08 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . S 8 19.203 -10.854 -42.743 1 78.32 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . S 8 18.507 -9.897 -43.408 1 76.5 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . S 8 17.469 -9.54 -42.628 1 77.17 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . S 8 16.343 -8.585 -42.715 1 76.62 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . S 8 16.197 -7.858 -43.718 1 81.52 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . S 8 15.489 -8.525 -41.685 1 82.01 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . S 8 15.623 -9.295 -40.589 1 75.32 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . S 8 14.716 -9.178 -39.591 1 76.59 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . S 8 16.629 -10.189 -40.442 1 77.06 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . S 8 17.559 -10.352 -41.409 1 79.33 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #