data_5S52 # _model_server_result.job_id wZiA7DN_MQvTDS6RWgArRg _model_server_result.datetime_utc '2024-11-24 23:34:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s52 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 5S52 # _exptl.entry_id 5S52 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S52 _cell.length_a 105.09 _cell.length_b 161.57 _cell.length_c 174.88 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S52 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc9 G O2G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc10 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc11 H MG MG . A MG 502 1_555 X O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc12 H MG MG . A MG 502 1_555 X O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc13 H MG MG . A MG 502 1_555 X O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc14 J CA CA . A CA 504 1_555 BA O HOH . E HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.075 ? metalc ? metalc15 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc16 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc17 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc18 L MG MG . B MG 502 1_555 Y O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc19 L MG MG . B MG 502 1_555 Y O HOH . B HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc20 L MG MG . B MG 502 1_555 Z O HOH . C HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc21 C OD1 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc22 C OD2 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc23 C O THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc24 C OG1 THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc25 C O GLY 44 C GLY 44 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc26 C OE1 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc27 C OE2 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc28 Q O1G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc29 Q O2G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc30 Q O3B GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc31 Q O1B GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc32 R MG MG . C MG 502 1_555 Z O HOH . C HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc33 R MG MG . C MG 502 1_555 Z O HOH . C HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc34 S CA CA . C CA 503 1_555 Z O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc35 D OE1 GLN 11 D GLN 11 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc36 T O1A GDP . D GDP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc37 F OE2 GLU 331 F GLU 331 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc38 V O3G ACP . F ACP 401 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc39 V O1B ACP . F ACP 401 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S52 _atom_sites.fract_transf_matrix[1][1] 0.009516 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006189 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 7 CA B 1 503 503 CA CA . N 9 MES B 1 504 504 MES MES . O 10 W1P B 1 505 601 W1P DRG . P 10 W1P B 1 506 701 W1P DRG . Q 5 GTP C 1 501 501 GTP GTP . R 6 MG C 1 502 502 MG MG . S 7 CA C 1 503 503 CA CA . T 8 GDP D 1 501 501 GDP GDP . U 6 MG D 1 502 502 MG MG . V 11 ACP F 1 401 401 ACP ACP . W 6 MG F 1 402 402 MG MG . X 12 HOH A 1 601 93 HOH HOH . X 12 HOH A 2 602 78 HOH HOH . X 12 HOH A 3 603 40 HOH HOH . X 12 HOH A 4 604 29 HOH HOH . X 12 HOH A 5 605 249 HOH HOH . X 12 HOH A 6 606 526 HOH HOH . X 12 HOH A 7 607 1538 HOH HOH . X 12 HOH A 8 608 125 HOH HOH . X 12 HOH A 9 609 203 HOH HOH . X 12 HOH A 10 610 31 HOH HOH . X 12 HOH A 11 611 156 HOH HOH . X 12 HOH A 12 612 434 HOH HOH . X 12 HOH A 13 613 1340 HOH HOH . X 12 HOH A 14 614 258 HOH HOH . X 12 HOH A 15 615 273 HOH HOH . X 12 HOH A 16 616 267 HOH HOH . Y 12 HOH B 1 601 333 HOH HOH . Y 12 HOH B 2 602 149 HOH HOH . Y 12 HOH B 3 603 550 HOH HOH . Y 12 HOH B 4 604 362 HOH HOH . Y 12 HOH B 5 605 416 HOH HOH . Y 12 HOH B 6 606 509 HOH HOH . Y 12 HOH B 7 607 516 HOH HOH . Y 12 HOH B 8 608 432 HOH HOH . Y 12 HOH B 9 609 378 HOH HOH . Y 12 HOH B 10 610 405 HOH HOH . Y 12 HOH B 11 611 817 HOH HOH . Y 12 HOH B 12 612 428 HOH HOH . Y 12 HOH B 13 613 469 HOH HOH . Y 12 HOH B 14 614 363 HOH HOH . Y 12 HOH B 15 615 470 HOH HOH . Y 12 HOH B 16 616 605 HOH HOH . Y 12 HOH B 17 617 503 HOH HOH . Y 12 HOH B 18 618 422 HOH HOH . Y 12 HOH B 19 619 487 HOH HOH . Y 12 HOH B 20 620 358 HOH HOH . Y 12 HOH B 21 621 454 HOH HOH . Y 12 HOH B 22 622 564 HOH HOH . Y 12 HOH B 23 623 345 HOH HOH . Y 12 HOH B 24 624 597 HOH HOH . Y 12 HOH B 25 625 903 HOH HOH . Y 12 HOH B 26 626 577 HOH HOH . Y 12 HOH B 27 627 519 HOH HOH . Y 12 HOH B 28 628 1362 HOH HOH . Y 12 HOH B 29 629 347 HOH HOH . Y 12 HOH B 30 630 825 HOH HOH . Y 12 HOH B 31 631 461 HOH HOH . Y 12 HOH B 32 632 721 HOH HOH . Y 12 HOH B 33 633 382 HOH HOH . Y 12 HOH B 34 634 407 HOH HOH . Y 12 HOH B 35 635 479 HOH HOH . Y 12 HOH B 36 636 614 HOH HOH . Z 12 HOH C 1 601 622 HOH HOH . Z 12 HOH C 2 602 840 HOH HOH . Z 12 HOH C 3 603 641 HOH HOH . Z 12 HOH C 4 604 782 HOH HOH . Z 12 HOH C 5 605 719 HOH HOH . Z 12 HOH C 6 606 784 HOH HOH . Z 12 HOH C 7 607 763 HOH HOH . Z 12 HOH C 8 608 770 HOH HOH . Z 12 HOH C 9 609 868 HOH HOH . Z 12 HOH C 10 610 888 HOH HOH . Z 12 HOH C 11 611 753 HOH HOH . Z 12 HOH C 12 612 886 HOH HOH . Z 12 HOH C 13 613 440 HOH HOH . Z 12 HOH C 14 614 692 HOH HOH . Z 12 HOH C 15 615 714 HOH HOH . Z 12 HOH C 16 616 735 HOH HOH . Z 12 HOH C 17 617 995 HOH HOH . Z 12 HOH C 18 618 732 HOH HOH . Z 12 HOH C 19 619 909 HOH HOH . Z 12 HOH C 20 620 747 HOH HOH . Z 12 HOH C 21 621 647 HOH HOH . Z 12 HOH C 22 622 807 HOH HOH . Z 12 HOH C 23 623 796 HOH HOH . Z 12 HOH C 24 624 659 HOH HOH . Z 12 HOH C 25 625 1027 HOH HOH . Z 12 HOH C 26 626 813 HOH HOH . Z 12 HOH C 27 627 765 HOH HOH . Z 12 HOH C 28 628 761 HOH HOH . Z 12 HOH C 29 629 835 HOH HOH . Z 12 HOH C 30 630 882 HOH HOH . Z 12 HOH C 31 631 797 HOH HOH . Z 12 HOH C 32 632 1065 HOH HOH . Z 12 HOH C 33 633 742 HOH HOH . Z 12 HOH C 34 634 775 HOH HOH . Z 12 HOH C 35 635 979 HOH HOH . Z 12 HOH C 36 636 976 HOH HOH . Z 12 HOH C 37 637 991 HOH HOH . Z 12 HOH C 38 638 799 HOH HOH . Z 12 HOH C 39 639 949 HOH HOH . Z 12 HOH C 40 640 872 HOH HOH . Z 12 HOH C 41 641 751 HOH HOH . Z 12 HOH C 42 642 902 HOH HOH . Z 12 HOH C 43 643 1002 HOH HOH . Z 12 HOH C 44 644 923 HOH HOH . Z 12 HOH C 45 645 859 HOH HOH . Z 12 HOH C 46 646 801 HOH HOH . Z 12 HOH C 47 647 1024 HOH HOH . Z 12 HOH C 48 648 901 HOH HOH . Z 12 HOH C 49 649 1000 HOH HOH . Z 12 HOH C 50 650 928 HOH HOH . Z 12 HOH C 51 651 937 HOH HOH . Z 12 HOH C 52 652 963 HOH HOH . Z 12 HOH C 53 653 874 HOH HOH . Z 12 HOH C 54 654 986 HOH HOH . Z 12 HOH C 55 655 977 HOH HOH . Z 12 HOH C 56 656 1095 HOH HOH . AA 12 HOH D 1 601 1211 HOH HOH . AA 12 HOH D 2 602 1220 HOH HOH . AA 12 HOH D 3 603 1234 HOH HOH . AA 12 HOH D 4 604 1222 HOH HOH . BA 12 HOH E 1 201 1376 HOH HOH . BA 12 HOH E 2 202 660 HOH HOH . BA 12 HOH E 3 203 1334 HOH HOH . BA 12 HOH E 4 204 1366 HOH HOH . BA 12 HOH E 5 205 1406 HOH HOH . CA 12 HOH F 1 501 1485 HOH HOH . CA 12 HOH F 2 502 1537 HOH HOH . CA 12 HOH F 3 503 1486 HOH HOH . CA 12 HOH F 4 504 1513 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . K 8 19.484 50.197 16.016 1 53.81 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . K 8 18.698 51.029 15.031 1 63.94 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . K 8 20.715 50.946 16.459 1 57.4 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . K 8 19.89 48.9 15.358 1 49 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . K 8 18.58 49.898 17.314 1 61.2 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . K 8 17.026 49.513 17.164 1 52.98 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . K 8 16.776 48.761 15.878 1 64.5 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . K 8 16.18 50.762 17.225 1 55.26 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . K 8 16.774 48.582 18.456 1 56.07 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . K 8 15.771 47.568 18.474 1 54.1 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . K 8 15.148 47.534 19.861 1 56.42 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . K 8 14.72 48.859 20.173 1 57.93 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . K 8 13.928 46.634 19.911 1 61.29 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . K 8 14.006 45.795 21.067 1 56.17 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . K 8 12.732 47.553 20.036 1 55.55 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . K 8 11.908 47.108 21.113 1 61.03 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . K 8 13.305 48.92 20.364 1 56.27 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . K 8 12.76 49.985 19.486 1 57.8 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . K 8 13.044 50.161 18.181 1 54.95 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . K 8 12.39 51.243 17.684 1 53.38 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . K 8 11.676 51.782 18.69 1 55.05 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . K 8 10.766 52.937 18.865 1 56.75 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . K 8 10.497 53.695 17.91 1 63.81 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . K 8 10.235 53.147 20.076 1 58.76 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . K 8 10.501 52.352 21.128 1 54.21 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . K 8 9.922 52.638 22.318 1 54.79 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . K 8 11.325 51.279 21.043 1 57.68 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . K 8 11.928 50.952 19.876 1 58.97 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #