data_5S57 # _model_server_result.job_id G_nJW-PNGC7roi6gAiIX7Q _model_server_result.datetime_utc '2024-11-07 16:34:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s57 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":501}' # _entry.id 5S57 # _exptl.entry_id 5S57 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S57 _cell.length_a 104.68 _cell.length_b 159.27 _cell.length_c 180.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S57 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.03 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc10 H MG MG . A MG 502 1_555 V O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc11 H MG MG . A MG 502 1_555 V O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc12 H MG MG . A MG 502 1_555 V O HOH . A HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc13 V O HOH . A HOH 622 1_555 S CA CA . E CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc14 V O HOH . A HOH 627 1_555 S CA CA . E CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc15 B OE1 GLN 11 B GLN 11 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc16 B OE1 GLU 111 B GLU 113 1_555 L CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc17 J O1A GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc18 K MG MG . B MG 502 1_555 W O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? metalc ? metalc19 K MG MG . B MG 502 1_555 W O HOH . B HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc20 K MG MG . B MG 502 1_555 X O HOH . C HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc21 L CA CA . B CA 503 4_455 C OE1 GLU 284 C GLU 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.003 ? metalc ? metalc22 C OD1 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc23 C OD2 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc24 C O THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc25 C OG1 THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc26 C O GLY 44 C GLY 44 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc27 C OE1 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc28 C OE2 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc29 N O1G GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc30 N O1B GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc31 O MG MG . C MG 502 1_555 X O HOH . C HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc32 O MG MG . C MG 502 1_555 X O HOH . C HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc33 O MG MG . C MG 502 1_555 X O HOH . C HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc34 O MG MG . C MG 502 1_555 X O HOH . C HOH 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc35 P CA CA . C CA 503 1_555 X O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc36 D OE1 GLN 11 D GLN 11 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc37 Q O1A GDP . D GDP 501 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc38 R MG MG . D MG 502 1_555 Y O HOH . D HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc39 F OE2 GLU 331 F GLU 331 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc40 F OD1 ASN 333 F ASN 333 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc41 T O3G ACP . F ACP 401 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc42 T O1B ACP . F ACP 401 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S57 _atom_sites.fract_transf_matrix[1][1] 0.009553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005534 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 7 CA B 1 503 503 CA CA . M 9 WZS B 1 504 601 WZS DRG . N 5 GTP C 1 501 501 GTP GTP . O 6 MG C 1 502 502 MG MG . P 7 CA C 1 503 503 CA CA . Q 8 GDP D 1 501 501 GDP GDP . R 6 MG D 1 502 502 MG MG . S 7 CA E 1 201 504 CA CA . T 10 ACP F 1 401 401 ACP ACP . U 6 MG F 1 402 402 MG MG . V 11 HOH A 1 601 79 HOH HOH . V 11 HOH A 2 602 109 HOH HOH . V 11 HOH A 3 603 140 HOH HOH . V 11 HOH A 4 604 126 HOH HOH . V 11 HOH A 5 605 161 HOH HOH . V 11 HOH A 6 606 78 HOH HOH . V 11 HOH A 7 607 47 HOH HOH . V 11 HOH A 8 608 40 HOH HOH . V 11 HOH A 9 609 29 HOH HOH . V 11 HOH A 10 610 60 HOH HOH . V 11 HOH A 11 611 93 HOH HOH . V 11 HOH A 12 612 123 HOH HOH . V 11 HOH A 13 613 106 HOH HOH . V 11 HOH A 14 614 135 HOH HOH . V 11 HOH A 15 615 434 HOH HOH . V 11 HOH A 16 616 156 HOH HOH . V 11 HOH A 17 617 88 HOH HOH . V 11 HOH A 18 618 174 HOH HOH . V 11 HOH A 19 619 108 HOH HOH . V 11 HOH A 20 620 228 HOH HOH . V 11 HOH A 21 621 191 HOH HOH . V 11 HOH A 22 622 43 HOH HOH . V 11 HOH A 23 623 65 HOH HOH . V 11 HOH A 24 624 97 HOH HOH . V 11 HOH A 25 625 203 HOH HOH . V 11 HOH A 26 626 180 HOH HOH . V 11 HOH A 27 627 213 HOH HOH . V 11 HOH A 28 628 173 HOH HOH . V 11 HOH A 29 629 263 HOH HOH . V 11 HOH A 30 630 258 HOH HOH . V 11 HOH A 31 631 267 HOH HOH . V 11 HOH A 32 632 249 HOH HOH . V 11 HOH A 33 633 526 HOH HOH . V 11 HOH A 34 634 291 HOH HOH . V 11 HOH A 35 635 363 HOH HOH . V 11 HOH A 36 636 1539 HOH HOH . W 11 HOH B 1 601 333 HOH HOH . W 11 HOH B 2 602 423 HOH HOH . W 11 HOH B 3 603 330 HOH HOH . W 11 HOH B 4 604 517 HOH HOH . W 11 HOH B 5 605 392 HOH HOH . W 11 HOH B 6 606 335 HOH HOH . W 11 HOH B 7 607 378 HOH HOH . W 11 HOH B 8 608 375 HOH HOH . W 11 HOH B 9 609 382 HOH HOH . W 11 HOH B 10 610 405 HOH HOH . W 11 HOH B 11 611 361 HOH HOH . W 11 HOH B 12 612 487 HOH HOH . W 11 HOH B 13 613 351 HOH HOH . W 11 HOH B 14 614 502 HOH HOH . W 11 HOH B 15 615 470 HOH HOH . W 11 HOH B 16 616 442 HOH HOH . W 11 HOH B 17 617 428 HOH HOH . W 11 HOH B 18 618 1362 HOH HOH . W 11 HOH B 19 619 432 HOH HOH . W 11 HOH B 20 620 448 HOH HOH . W 11 HOH B 21 621 358 HOH HOH . W 11 HOH B 22 622 412 HOH HOH . W 11 HOH B 23 623 454 HOH HOH . W 11 HOH B 24 624 495 HOH HOH . W 11 HOH B 25 625 1538 HOH HOH . W 11 HOH B 26 626 573 HOH HOH . W 11 HOH B 27 627 416 HOH HOH . W 11 HOH B 28 628 345 HOH HOH . W 11 HOH B 29 629 430 HOH HOH . W 11 HOH B 30 630 503 HOH HOH . W 11 HOH B 31 631 438 HOH HOH . W 11 HOH B 32 632 903 HOH HOH . W 11 HOH B 33 633 385 HOH HOH . W 11 HOH B 34 634 557 HOH HOH . W 11 HOH B 35 635 469 HOH HOH . W 11 HOH B 36 636 436 HOH HOH . W 11 HOH B 37 637 564 HOH HOH . W 11 HOH B 38 638 479 HOH HOH . W 11 HOH B 39 639 422 HOH HOH . W 11 HOH B 40 640 597 HOH HOH . W 11 HOH B 41 641 509 HOH HOH . W 11 HOH B 42 642 949 HOH HOH . W 11 HOH B 43 643 290 HOH HOH . W 11 HOH B 44 644 577 HOH HOH . W 11 HOH B 45 645 610 HOH HOH . X 11 HOH C 1 601 739 HOH HOH . X 11 HOH C 2 602 641 HOH HOH . X 11 HOH C 3 603 735 HOH HOH . X 11 HOH C 4 604 660 HOH HOH . X 11 HOH C 5 605 730 HOH HOH . X 11 HOH C 6 606 810 HOH HOH . X 11 HOH C 7 607 765 HOH HOH . X 11 HOH C 8 608 806 HOH HOH . X 11 HOH C 9 609 761 HOH HOH . X 11 HOH C 10 610 664 HOH HOH . X 11 HOH C 11 611 677 HOH HOH . X 11 HOH C 12 612 763 HOH HOH . X 11 HOH C 13 613 647 HOH HOH . X 11 HOH C 14 614 764 HOH HOH . X 11 HOH C 15 615 705 HOH HOH . X 11 HOH C 16 616 669 HOH HOH . X 11 HOH C 17 617 792 HOH HOH . X 11 HOH C 18 618 819 HOH HOH . X 11 HOH C 19 619 740 HOH HOH . X 11 HOH C 20 620 746 HOH HOH . X 11 HOH C 21 621 716 HOH HOH . X 11 HOH C 22 622 659 HOH HOH . X 11 HOH C 23 623 723 HOH HOH . X 11 HOH C 24 624 732 HOH HOH . X 11 HOH C 25 625 750 HOH HOH . X 11 HOH C 26 626 800 HOH HOH . X 11 HOH C 27 627 882 HOH HOH . X 11 HOH C 28 628 803 HOH HOH . X 11 HOH C 29 629 744 HOH HOH . X 11 HOH C 30 630 748 HOH HOH . X 11 HOH C 31 631 837 HOH HOH . X 11 HOH C 32 632 698 HOH HOH . X 11 HOH C 33 633 717 HOH HOH . X 11 HOH C 34 634 714 HOH HOH . X 11 HOH C 35 635 782 HOH HOH . X 11 HOH C 36 636 784 HOH HOH . X 11 HOH C 37 637 752 HOH HOH . X 11 HOH C 38 638 848 HOH HOH . X 11 HOH C 39 639 742 HOH HOH . X 11 HOH C 40 640 701 HOH HOH . X 11 HOH C 41 641 789 HOH HOH . X 11 HOH C 42 642 1054 HOH HOH . X 11 HOH C 43 643 928 HOH HOH . X 11 HOH C 44 644 687 HOH HOH . X 11 HOH C 45 645 859 HOH HOH . X 11 HOH C 46 646 840 HOH HOH . X 11 HOH C 47 647 670 HOH HOH . X 11 HOH C 48 648 738 HOH HOH . X 11 HOH C 49 649 753 HOH HOH . X 11 HOH C 50 650 770 HOH HOH . X 11 HOH C 51 651 834 HOH HOH . X 11 HOH C 52 652 719 HOH HOH . X 11 HOH C 53 653 751 HOH HOH . X 11 HOH C 54 654 818 HOH HOH . X 11 HOH C 55 655 775 HOH HOH . X 11 HOH C 56 656 872 HOH HOH . X 11 HOH C 57 657 813 HOH HOH . X 11 HOH C 58 658 829 HOH HOH . X 11 HOH C 59 659 747 HOH HOH . X 11 HOH C 60 660 749 HOH HOH . X 11 HOH C 61 661 888 HOH HOH . X 11 HOH C 62 662 676 HOH HOH . X 11 HOH C 63 663 737 HOH HOH . X 11 HOH C 64 664 787 HOH HOH . X 11 HOH C 65 665 692 HOH HOH . X 11 HOH C 66 666 811 HOH HOH . X 11 HOH C 67 667 645 HOH HOH . X 11 HOH C 68 668 880 HOH HOH . X 11 HOH C 69 669 440 HOH HOH . X 11 HOH C 70 670 868 HOH HOH . X 11 HOH C 71 671 971 HOH HOH . X 11 HOH C 72 672 655 HOH HOH . X 11 HOH C 73 673 909 HOH HOH . X 11 HOH C 74 674 733 HOH HOH . X 11 HOH C 75 675 825 HOH HOH . X 11 HOH C 76 676 906 HOH HOH . X 11 HOH C 77 677 817 HOH HOH . X 11 HOH C 78 678 757 HOH HOH . X 11 HOH C 79 679 830 HOH HOH . X 11 HOH C 80 680 622 HOH HOH . X 11 HOH C 81 681 885 HOH HOH . X 11 HOH C 82 682 822 HOH HOH . X 11 HOH C 83 683 876 HOH HOH . X 11 HOH C 84 684 797 HOH HOH . X 11 HOH C 85 685 833 HOH HOH . X 11 HOH C 86 686 807 HOH HOH . X 11 HOH C 87 687 938 HOH HOH . X 11 HOH C 88 688 847 HOH HOH . X 11 HOH C 89 689 1016 HOH HOH . X 11 HOH C 90 690 873 HOH HOH . X 11 HOH C 91 691 979 HOH HOH . X 11 HOH C 92 692 956 HOH HOH . X 11 HOH C 93 693 953 HOH HOH . X 11 HOH C 94 694 902 HOH HOH . X 11 HOH C 95 695 889 HOH HOH . X 11 HOH C 96 696 776 HOH HOH . X 11 HOH C 97 697 955 HOH HOH . X 11 HOH C 98 698 877 HOH HOH . X 11 HOH C 99 699 937 HOH HOH . X 11 HOH C 100 700 801 HOH HOH . X 11 HOH C 101 701 874 HOH HOH . X 11 HOH C 102 702 923 HOH HOH . X 11 HOH C 103 703 913 HOH HOH . X 11 HOH C 104 704 1024 HOH HOH . X 11 HOH C 105 705 1002 HOH HOH . X 11 HOH C 106 706 995 HOH HOH . X 11 HOH C 107 707 821 HOH HOH . X 11 HOH C 108 708 1001 HOH HOH . X 11 HOH C 109 709 864 HOH HOH . X 11 HOH C 110 710 862 HOH HOH . X 11 HOH C 111 711 973 HOH HOH . X 11 HOH C 112 712 1003 HOH HOH . X 11 HOH C 113 713 991 HOH HOH . X 11 HOH C 114 714 1005 HOH HOH . X 11 HOH C 115 715 999 HOH HOH . X 11 HOH C 116 716 998 HOH HOH . X 11 HOH C 117 717 1048 HOH HOH . X 11 HOH C 118 718 977 HOH HOH . X 11 HOH C 119 719 1027 HOH HOH . X 11 HOH C 120 720 986 HOH HOH . X 11 HOH C 121 721 924 HOH HOH . X 11 HOH C 122 722 1065 HOH HOH . X 11 HOH C 123 723 1056 HOH HOH . X 11 HOH C 124 724 1012 HOH HOH . X 11 HOH C 125 725 1023 HOH HOH . X 11 HOH C 126 726 1090 HOH HOH . X 11 HOH C 127 727 936 HOH HOH . X 11 HOH C 128 728 1044 HOH HOH . X 11 HOH C 129 729 1076 HOH HOH . X 11 HOH C 130 730 560 HOH HOH . Y 11 HOH D 1 601 1211 HOH HOH . Y 11 HOH D 2 602 1200 HOH HOH . Y 11 HOH D 3 603 1101 HOH HOH . Y 11 HOH D 4 604 1172 HOH HOH . Y 11 HOH D 5 605 1178 HOH HOH . Y 11 HOH D 6 606 1142 HOH HOH . Y 11 HOH D 7 607 1144 HOH HOH . Y 11 HOH D 8 608 1177 HOH HOH . Y 11 HOH D 9 609 696 HOH HOH . Y 11 HOH D 10 610 1296 HOH HOH . Y 11 HOH D 11 611 1220 HOH HOH . Y 11 HOH D 12 612 1188 HOH HOH . Y 11 HOH D 13 613 1193 HOH HOH . Y 11 HOH D 14 614 1257 HOH HOH . Y 11 HOH D 15 615 1180 HOH HOH . Y 11 HOH D 16 616 1245 HOH HOH . Y 11 HOH D 17 617 1222 HOH HOH . Z 11 HOH E 1 301 379 HOH HOH . Z 11 HOH E 2 302 1378 HOH HOH . AA 11 HOH F 1 501 1474 HOH HOH . AA 11 HOH F 2 502 1485 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . Q 8 25.503 -9.697 -43.481 1 83.29 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . Q 8 24.681 -9.01 -44.544 1 81.15 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . Q 8 26.446 -8.699 -42.857 1 94.85 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . Q 8 26.32 -10.82 -44.072 1 93.71 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . Q 8 24.531 -10.268 -42.339 1 90.56 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . Q 8 23.085 -10.879 -42.682 1 85.4 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . Q 8 23.161 -11.834 -43.848 1 98.94 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . Q 8 22.086 -9.781 -42.951 1 78.78 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . Q 8 22.728 -11.647 -41.314 1 87.03 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . Q 8 22.017 -12.878 -41.329 1 82.7 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . Q 8 20.915 -12.781 -40.293 1 82.21 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . Q 8 20.242 -11.544 -40.51 1 82.85 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . Q 8 19.889 -13.884 -40.472 1 88.89 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . Q 8 19.718 -14.576 -39.233 1 87.97 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . Q 8 18.6 -13.193 -40.875 1 87.47 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . Q 8 17.496 -13.703 -40.125 1 91.36 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . Q 8 18.83 -11.733 -40.539 1 80.57 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . Q 8 18.232 -10.828 -41.548 1 76.77 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . Q 8 18.686 -10.601 -42.792 1 78.13 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . Q 8 17.902 -9.696 -43.434 1 79.44 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . Q 8 16.927 -9.325 -42.589 1 72.54 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . Q 8 15.768 -8.405 -42.623 1 80.97 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . Q 8 15.503 -7.731 -43.643 1 86.71 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . Q 8 15.007 -8.315 -41.523 1 84.63 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . Q 8 15.264 -9.023 -40.405 1 80.53 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . Q 8 14.444 -8.873 -39.337 1 78.56 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . Q 8 16.308 -9.884 -40.305 1 76.08 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . Q 8 17.155 -10.071 -41.345 1 80.4 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #