data_5S5I
#
_model_server_result.job_id            3QLMOm_tQyH-jAotU1m6VQ 
_model_server_result.datetime_utc      '2024-11-07 16:50:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5s5i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":501}' 
#
_entry.id    5S5I 
#
_exptl.entry_id    5S5I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.201 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-DIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5S5I 
_cell.length_a            104.89 
_cell.length_b            158.87 
_cell.length_c            179.47 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5S5I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 8 K N N 
? 8 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? 
metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? 
metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? 
metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.065 ? 
metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? 
metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc10 H MG MG . A MG 502 1_555 W O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc11 H MG MG . A MG 502 1_555 W O HOH . A HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc12 H MG MG . A MG 502 1_555 W O HOH . A HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc13 H MG MG . A MG 502 1_555 W O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc14 J CA CA . A CA 504 1_555 AA O HOH . E HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? 
metalc ? metalc15 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? 
metalc ? metalc16 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? 
metalc ? metalc17 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc18 L MG MG . B MG 502 1_555 X O HOH . B HOH 633 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
metalc ? metalc19 L MG MG . B MG 502 1_555 X O HOH . B HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? 
metalc ? metalc20 L MG MG . B MG 502 1_555 Y O HOH . C HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc21 M CA CA . B CA 503 4_455 C OE1 GLU 284 C GLU 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? 
metalc ? metalc22 C OD1 ASP 39 C ASP 39 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? 
metalc ? metalc23 C OD2 ASP 39 C ASP 39 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc24 C O THR 41 C THR 41 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc25 C OG1 THR 41 C THR 41 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? 
metalc ? metalc26 C O GLY 44 C GLY 44 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc27 C OE1 GLU 55 C GLU 55 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc28 C OE2 GLU 55 C GLU 55 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc29 O O1G GTP . C GTP 501 1_555 P MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc30 O O1B GTP . C GTP 501 1_555 P MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc31 P MG MG . C MG 502 1_555 Y O HOH . C HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc32 P MG MG . C MG 502 1_555 Y O HOH . C HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc33 P MG MG . C MG 502 1_555 Y O HOH . C HOH 646 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
metalc ? metalc34 P MG MG . C MG 502 1_555 Y O HOH . C HOH 666 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? 
metalc ? metalc35 Q CA CA . C CA 503 1_555 Y O HOH . C HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc36 D OE1 GLN 11 D GLN 11 1_555 T MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc37 S O1A GDP . D GDP 501 1_555 T MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc38 T MG MG . D MG 502 1_555 Z O HOH . D HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? 
metalc ? metalc39 F OE2 GLU 331 F GLU 331 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc40 U O3G ACP . F ACP 401 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc41 U O1B ACP . F ACP 401 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
#
_chem_comp.formula           'C10 H15 N5 O11 P2' 
_chem_comp.formula_weight    443.201 
_chem_comp.id                GDP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-DIPHOSPHATE" 
_chem_comp.type              'rna linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PB O1B GDP doub 134 n n 
PB O2B GDP sing 135 n n 
PB O3B GDP sing 136 n n 
PB O3A GDP sing 137 n n 
O2B HOB2 GDP sing 138 n n 
O3B HOB3 GDP sing 139 n n 
O3A PA GDP sing 140 n n 
PA O1A GDP doub 141 n n 
PA O2A GDP sing 142 n n 
PA O5' GDP sing 143 n n 
O2A HOA2 GDP sing 144 n n 
O5' C5' GDP sing 145 n n 
C5' C4' GDP sing 146 n n 
C5' H5' GDP sing 147 n n 
C5' "H5''" GDP sing 148 n n 
C4' O4' GDP sing 149 n n 
C4' C3' GDP sing 150 n n 
C4' H4' GDP sing 151 n n 
O4' C1' GDP sing 152 n n 
C3' O3' GDP sing 153 n n 
C3' C2' GDP sing 154 n n 
C3' H3' GDP sing 155 n n 
O3' HO3' GDP sing 156 n n 
C2' O2' GDP sing 157 n n 
C2' C1' GDP sing 158 n n 
C2' H2' GDP sing 159 n n 
O2' HO2' GDP sing 160 n n 
C1' N9 GDP sing 161 n n 
C1' H1' GDP sing 162 n n 
N9 C8 GDP sing 163 n y 
N9 C4 GDP sing 164 n y 
C8 N7 GDP doub 165 n y 
C8 H8 GDP sing 166 n n 
N7 C5 GDP sing 167 n y 
C5 C6 GDP sing 168 n n 
C5 C4 GDP doub 169 n y 
C6 O6 GDP doub 170 n n 
C6 N1 GDP sing 171 n n 
N1 C2 GDP sing 172 n n 
N1 HN1 GDP sing 173 n n 
C2 N2 GDP sing 174 n n 
C2 N3 GDP doub 175 n n 
N2 HN21 GDP sing 176 n n 
N2 HN22 GDP sing 177 n n 
N3 C4 GDP sing 178 n n 
#
_atom_sites.entry_id                     5S5I 
_atom_sites.fract_transf_matrix[1][1]    0.009534 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006294 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005572 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 5 GTP A 1 501 501 GTP GTP . 
H 6 MG A 1 502 502 MG MG . 
I 7 CA A 1 503 503 CA CA . 
J 7 CA A 1 504 504 CA CA . 
K 8 GDP B 1 501 501 GDP GDP . 
L 6 MG B 1 502 502 MG MG . 
M 7 CA B 1 503 503 CA CA . 
N 9 MES B 1 504 504 MES MES . 
O 5 GTP C 1 501 501 GTP GTP . 
P 6 MG C 1 502 502 MG MG . 
Q 7 CA C 1 503 503 CA CA . 
R 10 X0G C 1 504 601 X0G DRG . 
S 8 GDP D 1 501 501 GDP GDP . 
T 6 MG D 1 502 502 MG MG . 
U 11 ACP F 1 401 401 ACP ACP . 
V 6 MG F 1 402 402 MG MG . 
W 12 HOH A 1 601 79 HOH HOH . 
W 12 HOH A 2 602 88 HOH HOH . 
W 12 HOH A 3 603 47 HOH HOH . 
W 12 HOH A 4 604 29 HOH HOH . 
W 12 HOH A 5 605 25 HOH HOH . 
W 12 HOH A 6 606 198 HOH HOH . 
W 12 HOH A 7 607 40 HOH HOH . 
W 12 HOH A 8 608 151 HOH HOH . 
W 12 HOH A 9 609 180 HOH HOH . 
W 12 HOH A 10 610 109 HOH HOH . 
W 12 HOH A 11 611 1340 HOH HOH . 
W 12 HOH A 12 612 1556 HOH HOH . 
W 12 HOH A 13 613 94 HOH HOH . 
W 12 HOH A 14 614 87 HOH HOH . 
W 12 HOH A 15 615 126 HOH HOH . 
W 12 HOH A 16 616 97 HOH HOH . 
W 12 HOH A 17 617 55 HOH HOH . 
W 12 HOH A 18 618 106 HOH HOH . 
W 12 HOH A 19 619 81 HOH HOH . 
W 12 HOH A 20 620 60 HOH HOH . 
W 12 HOH A 21 621 161 HOH HOH . 
W 12 HOH A 22 622 52 HOH HOH . 
W 12 HOH A 23 623 123 HOH HOH . 
W 12 HOH A 24 624 93 HOH HOH . 
W 12 HOH A 25 625 78 HOH HOH . 
W 12 HOH A 26 626 108 HOH HOH . 
W 12 HOH A 27 627 191 HOH HOH . 
W 12 HOH A 28 628 228 HOH HOH . 
W 12 HOH A 29 629 65 HOH HOH . 
W 12 HOH A 30 630 135 HOH HOH . 
W 12 HOH A 31 631 24 HOH HOH . 
W 12 HOH A 32 632 152 HOH HOH . 
W 12 HOH A 33 633 196 HOH HOH . 
W 12 HOH A 34 634 137 HOH HOH . 
W 12 HOH A 35 635 118 HOH HOH . 
W 12 HOH A 36 636 125 HOH HOH . 
W 12 HOH A 37 637 213 HOH HOH . 
W 12 HOH A 38 638 257 HOH HOH . 
W 12 HOH A 39 639 195 HOH HOH . 
W 12 HOH A 40 640 156 HOH HOH . 
W 12 HOH A 41 641 102 HOH HOH . 
W 12 HOH A 42 642 258 HOH HOH . 
W 12 HOH A 43 643 203 HOH HOH . 
W 12 HOH A 44 644 263 HOH HOH . 
W 12 HOH A 45 645 267 HOH HOH . 
W 12 HOH A 46 646 273 HOH HOH . 
W 12 HOH A 47 647 1373 HOH HOH . 
W 12 HOH A 48 648 290 HOH HOH . 
W 12 HOH A 49 649 291 HOH HOH . 
W 12 HOH A 50 650 141 HOH HOH . 
X 12 HOH B 1 601 331 HOH HOH . 
X 12 HOH B 2 602 349 HOH HOH . 
X 12 HOH B 3 603 387 HOH HOH . 
X 12 HOH B 4 604 335 HOH HOH . 
X 12 HOH B 5 605 362 HOH HOH . 
X 12 HOH B 6 606 526 HOH HOH . 
X 12 HOH B 7 607 386 HOH HOH . 
X 12 HOH B 8 608 470 HOH HOH . 
X 12 HOH B 9 609 358 HOH HOH . 
X 12 HOH B 10 610 375 HOH HOH . 
X 12 HOH B 11 611 361 HOH HOH . 
X 12 HOH B 12 612 383 HOH HOH . 
X 12 HOH B 13 613 451 HOH HOH . 
X 12 HOH B 14 614 432 HOH HOH . 
X 12 HOH B 15 615 442 HOH HOH . 
X 12 HOH B 16 616 326 HOH HOH . 
X 12 HOH B 17 617 505 HOH HOH . 
X 12 HOH B 18 618 423 HOH HOH . 
X 12 HOH B 19 619 351 HOH HOH . 
X 12 HOH B 20 620 434 HOH HOH . 
X 12 HOH B 21 621 454 HOH HOH . 
X 12 HOH B 22 622 825 HOH HOH . 
X 12 HOH B 23 623 502 HOH HOH . 
X 12 HOH B 24 624 393 HOH HOH . 
X 12 HOH B 25 625 484 HOH HOH . 
X 12 HOH B 26 626 479 HOH HOH . 
X 12 HOH B 27 627 430 HOH HOH . 
X 12 HOH B 28 628 469 HOH HOH . 
X 12 HOH B 29 629 422 HOH HOH . 
X 12 HOH B 30 630 412 HOH HOH . 
X 12 HOH B 31 631 428 HOH HOH . 
X 12 HOH B 32 632 495 HOH HOH . 
X 12 HOH B 33 633 440 HOH HOH . 
X 12 HOH B 34 634 474 HOH HOH . 
X 12 HOH B 35 635 503 HOH HOH . 
X 12 HOH B 36 636 487 HOH HOH . 
X 12 HOH B 37 637 382 HOH HOH . 
X 12 HOH B 38 638 345 HOH HOH . 
X 12 HOH B 39 639 416 HOH HOH . 
X 12 HOH B 40 640 436 HOH HOH . 
X 12 HOH B 41 641 1362 HOH HOH . 
X 12 HOH B 42 642 427 HOH HOH . 
X 12 HOH B 43 643 438 HOH HOH . 
X 12 HOH B 44 644 414 HOH HOH . 
X 12 HOH B 45 645 407 HOH HOH . 
X 12 HOH B 46 646 448 HOH HOH . 
X 12 HOH B 47 647 405 HOH HOH . 
X 12 HOH B 48 648 529 HOH HOH . 
X 12 HOH B 49 649 557 HOH HOH . 
X 12 HOH B 50 650 586 HOH HOH . 
X 12 HOH B 51 651 481 HOH HOH . 
X 12 HOH B 52 652 509 HOH HOH . 
X 12 HOH B 53 653 540 HOH HOH . 
X 12 HOH B 54 654 559 HOH HOH . 
X 12 HOH B 55 655 372 HOH HOH . 
X 12 HOH B 56 656 534 HOH HOH . 
X 12 HOH B 57 657 528 HOH HOH . 
X 12 HOH B 58 658 564 HOH HOH . 
X 12 HOH B 59 659 297 HOH HOH . 
X 12 HOH B 60 660 560 HOH HOH . 
X 12 HOH B 61 661 597 HOH HOH . 
X 12 HOH B 62 662 573 HOH HOH . 
X 12 HOH B 63 663 327 HOH HOH . 
X 12 HOH B 64 664 603 HOH HOH . 
X 12 HOH B 65 665 617 HOH HOH . 
X 12 HOH B 66 666 610 HOH HOH . 
X 12 HOH B 67 667 596 HOH HOH . 
X 12 HOH B 68 668 520 HOH HOH . 
X 12 HOH B 69 669 619 HOH HOH . 
Y 12 HOH C 1 601 623 HOH HOH . 
Y 12 HOH C 2 602 645 HOH HOH . 
Y 12 HOH C 3 603 739 HOH HOH . 
Y 12 HOH C 4 604 658 HOH HOH . 
Y 12 HOH C 5 605 723 HOH HOH . 
Y 12 HOH C 6 606 647 HOH HOH . 
Y 12 HOH C 7 607 641 HOH HOH . 
Y 12 HOH C 8 608 660 HOH HOH . 
Y 12 HOH C 9 609 770 HOH HOH . 
Y 12 HOH C 10 610 829 HOH HOH . 
Y 12 HOH C 11 611 677 HOH HOH . 
Y 12 HOH C 12 612 669 HOH HOH . 
Y 12 HOH C 13 613 655 HOH HOH . 
Y 12 HOH C 14 614 694 HOH HOH . 
Y 12 HOH C 15 615 897 HOH HOH . 
Y 12 HOH C 16 616 730 HOH HOH . 
Y 12 HOH C 17 617 764 HOH HOH . 
Y 12 HOH C 18 618 698 HOH HOH . 
Y 12 HOH C 19 619 742 HOH HOH . 
Y 12 HOH C 20 620 664 HOH HOH . 
Y 12 HOH C 21 621 763 HOH HOH . 
Y 12 HOH C 22 622 913 HOH HOH . 
Y 12 HOH C 23 623 659 HOH HOH . 
Y 12 HOH C 24 624 663 HOH HOH . 
Y 12 HOH C 25 625 789 HOH HOH . 
Y 12 HOH C 26 626 894 HOH HOH . 
Y 12 HOH C 27 627 882 HOH HOH . 
Y 12 HOH C 28 628 747 HOH HOH . 
Y 12 HOH C 29 629 683 HOH HOH . 
Y 12 HOH C 30 630 714 HOH HOH . 
Y 12 HOH C 31 631 735 HOH HOH . 
Y 12 HOH C 32 632 931 HOH HOH . 
Y 12 HOH C 33 633 792 HOH HOH . 
Y 12 HOH C 34 634 800 HOH HOH . 
Y 12 HOH C 35 635 732 HOH HOH . 
Y 12 HOH C 36 636 716 HOH HOH . 
Y 12 HOH C 37 637 914 HOH HOH . 
Y 12 HOH C 38 638 687 HOH HOH . 
Y 12 HOH C 39 639 819 HOH HOH . 
Y 12 HOH C 40 640 757 HOH HOH . 
Y 12 HOH C 41 641 721 HOH HOH . 
Y 12 HOH C 42 642 876 HOH HOH . 
Y 12 HOH C 43 643 839 HOH HOH . 
Y 12 HOH C 44 644 906 HOH HOH . 
Y 12 HOH C 45 645 748 HOH HOH . 
Y 12 HOH C 46 646 744 HOH HOH . 
Y 12 HOH C 47 647 875 HOH HOH . 
Y 12 HOH C 48 648 955 HOH HOH . 
Y 12 HOH C 49 649 782 HOH HOH . 
Y 12 HOH C 50 650 915 HOH HOH . 
Y 12 HOH C 51 651 806 HOH HOH . 
Y 12 HOH C 52 652 837 HOH HOH . 
Y 12 HOH C 53 653 761 HOH HOH . 
Y 12 HOH C 54 654 818 HOH HOH . 
Y 12 HOH C 55 655 803 HOH HOH . 
Y 12 HOH C 56 656 752 HOH HOH . 
Y 12 HOH C 57 657 840 HOH HOH . 
Y 12 HOH C 58 658 923 HOH HOH . 
Y 12 HOH C 59 659 971 HOH HOH . 
Y 12 HOH C 60 660 753 HOH HOH . 
Y 12 HOH C 61 661 811 HOH HOH . 
Y 12 HOH C 62 662 776 HOH HOH . 
Y 12 HOH C 63 663 701 HOH HOH . 
Y 12 HOH C 64 664 835 HOH HOH . 
Y 12 HOH C 65 665 833 HOH HOH . 
Y 12 HOH C 66 666 888 HOH HOH . 
Y 12 HOH C 67 667 749 HOH HOH . 
Y 12 HOH C 68 668 738 HOH HOH . 
Y 12 HOH C 69 669 808 HOH HOH . 
Y 12 HOH C 70 670 775 HOH HOH . 
Y 12 HOH C 71 671 810 HOH HOH . 
Y 12 HOH C 72 672 689 HOH HOH . 
Y 12 HOH C 73 673 750 HOH HOH . 
Y 12 HOH C 74 674 670 HOH HOH . 
Y 12 HOH C 75 675 725 HOH HOH . 
Y 12 HOH C 76 676 765 HOH HOH . 
Y 12 HOH C 77 677 1365 HOH HOH . 
Y 12 HOH C 78 678 909 HOH HOH . 
Y 12 HOH C 79 679 740 HOH HOH . 
Y 12 HOH C 80 680 667 HOH HOH . 
Y 12 HOH C 81 681 953 HOH HOH . 
Y 12 HOH C 82 682 893 HOH HOH . 
Y 12 HOH C 83 683 817 HOH HOH . 
Y 12 HOH C 84 684 830 HOH HOH . 
Y 12 HOH C 85 685 751 HOH HOH . 
Y 12 HOH C 86 686 852 HOH HOH . 
Y 12 HOH C 87 687 868 HOH HOH . 
Y 12 HOH C 88 688 883 HOH HOH . 
Y 12 HOH C 89 689 822 HOH HOH . 
Y 12 HOH C 90 690 801 HOH HOH . 
Y 12 HOH C 91 691 859 HOH HOH . 
Y 12 HOH C 92 692 889 HOH HOH . 
Y 12 HOH C 93 693 901 HOH HOH . 
Y 12 HOH C 94 694 737 HOH HOH . 
Y 12 HOH C 95 695 873 HOH HOH . 
Y 12 HOH C 96 696 880 HOH HOH . 
Y 12 HOH C 97 697 910 HOH HOH . 
Y 12 HOH C 98 698 807 HOH HOH . 
Y 12 HOH C 99 699 848 HOH HOH . 
Y 12 HOH C 100 700 874 HOH HOH . 
Y 12 HOH C 101 701 809 HOH HOH . 
Y 12 HOH C 102 702 710 HOH HOH . 
Y 12 HOH C 103 703 797 HOH HOH . 
Y 12 HOH C 104 704 937 HOH HOH . 
Y 12 HOH C 105 705 733 HOH HOH . 
Y 12 HOH C 106 706 902 HOH HOH . 
Y 12 HOH C 107 707 1016 HOH HOH . 
Y 12 HOH C 108 708 1027 HOH HOH . 
Y 12 HOH C 109 709 1555 HOH HOH . 
Y 12 HOH C 110 710 956 HOH HOH . 
Y 12 HOH C 111 711 719 HOH HOH . 
Y 12 HOH C 112 712 972 HOH HOH . 
Y 12 HOH C 113 713 979 HOH HOH . 
Y 12 HOH C 114 714 938 HOH HOH . 
Y 12 HOH C 115 715 650 HOH HOH . 
Y 12 HOH C 116 716 858 HOH HOH . 
Y 12 HOH C 117 717 787 HOH HOH . 
Y 12 HOH C 118 718 717 HOH HOH . 
Y 12 HOH C 119 719 995 HOH HOH . 
Y 12 HOH C 120 720 847 HOH HOH . 
Y 12 HOH C 121 721 885 HOH HOH . 
Y 12 HOH C 122 722 980 HOH HOH . 
Y 12 HOH C 123 723 998 HOH HOH . 
Y 12 HOH C 124 724 924 HOH HOH . 
Y 12 HOH C 125 725 1001 HOH HOH . 
Y 12 HOH C 126 726 1002 HOH HOH . 
Y 12 HOH C 127 727 1554 HOH HOH . 
Y 12 HOH C 128 728 986 HOH HOH . 
Y 12 HOH C 129 729 877 HOH HOH . 
Y 12 HOH C 130 730 928 HOH HOH . 
Y 12 HOH C 131 731 963 HOH HOH . 
Y 12 HOH C 132 732 1000 HOH HOH . 
Y 12 HOH C 133 733 834 HOH HOH . 
Y 12 HOH C 134 734 903 HOH HOH . 
Y 12 HOH C 135 735 1041 HOH HOH . 
Y 12 HOH C 136 736 1024 HOH HOH . 
Y 12 HOH C 137 737 991 HOH HOH . 
Y 12 HOH C 138 738 1090 HOH HOH . 
Y 12 HOH C 139 739 1053 HOH HOH . 
Y 12 HOH C 140 740 1048 HOH HOH . 
Y 12 HOH C 141 741 1065 HOH HOH . 
Y 12 HOH C 142 742 1025 HOH HOH . 
Y 12 HOH C 143 743 1023 HOH HOH . 
Y 12 HOH C 144 744 973 HOH HOH . 
Y 12 HOH C 145 745 943 HOH HOH . 
Y 12 HOH C 146 746 1054 HOH HOH . 
Y 12 HOH C 147 747 1056 HOH HOH . 
Y 12 HOH C 148 748 1064 HOH HOH . 
Y 12 HOH C 149 749 1304 HOH HOH . 
Y 12 HOH C 150 750 1044 HOH HOH . 
Y 12 HOH C 151 751 1082 HOH HOH . 
Y 12 HOH C 152 752 1094 HOH HOH . 
Y 12 HOH C 153 753 1095 HOH HOH . 
Z 12 HOH D 1 601 1145 HOH HOH . 
Z 12 HOH D 2 602 1101 HOH HOH . 
Z 12 HOH D 3 603 1200 HOH HOH . 
Z 12 HOH D 4 604 713 HOH HOH . 
Z 12 HOH D 5 605 1220 HOH HOH . 
Z 12 HOH D 6 606 1217 HOH HOH . 
Z 12 HOH D 7 607 1142 HOH HOH . 
Z 12 HOH D 8 608 1247 HOH HOH . 
Z 12 HOH D 9 609 1177 HOH HOH . 
Z 12 HOH D 10 610 1212 HOH HOH . 
Z 12 HOH D 11 611 1274 HOH HOH . 
Z 12 HOH D 12 612 1237 HOH HOH . 
Z 12 HOH D 13 613 1188 HOH HOH . 
Z 12 HOH D 14 614 1193 HOH HOH . 
Z 12 HOH D 15 615 1258 HOH HOH . 
Z 12 HOH D 16 616 1250 HOH HOH . 
Z 12 HOH D 17 617 1234 HOH HOH . 
Z 12 HOH D 18 618 1257 HOH HOH . 
Z 12 HOH D 19 619 1180 HOH HOH . 
Z 12 HOH D 20 620 1245 HOH HOH . 
Z 12 HOH D 21 621 1222 HOH HOH . 
Z 12 HOH D 22 622 1296 HOH HOH . 
AA 12 HOH E 1 201 379 HOH HOH . 
AA 12 HOH E 2 202 1334 HOH HOH . 
AA 12 HOH E 3 203 1383 HOH HOH . 
AA 12 HOH E 4 204 1376 HOH HOH . 
AA 12 HOH E 5 205 1392 HOH HOH . 
AA 12 HOH E 6 206 551 HOH HOH . 
AA 12 HOH E 7 207 577 HOH HOH . 
BA 12 HOH F 1 501 1485 HOH HOH . 
BA 12 HOH F 2 502 1462 HOH HOH . 
BA 12 HOH F 3 503 1133 HOH HOH . 
BA 12 HOH F 4 504 1537 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PB GDP . . . K 8 18.76 49.719 15.991 1 48.66 ? PB GDP 501 B 1 
HETATM 2 O O1B GDP . . . K 8 18.1 50.678 15.027 1 50.96 ? O1B GDP 501 B 1 
HETATM 3 O O2B GDP . . . K 8 19.453 50.493 17.086 1 50.61 ? O2B GDP 501 B 1 
HETATM 4 O O3B GDP . . . K 8 19.783 48.874 15.268 1 55.18 ? O3B GDP 501 B 1 
HETATM 5 O O3A GDP . . . K 8 17.695 48.713 16.664 1 56.5 ? O3A GDP 501 B 1 
HETATM 6 P PA GDP . . . K 8 16.237 49.179 17.178 1 49.71 ? PA GDP 501 B 1 
HETATM 7 O O1A GDP . . . K 8 15.172 48.964 16.125 1 55.95 ? O1A GDP 501 B 1 
HETATM 8 O O2A GDP . . . K 8 16.268 50.615 17.645 1 47.94 ? O2A GDP 501 B 1 
HETATM 9 O O5' GDP . . . K 8 16.041 48.187 18.428 1 50.69 ? O5' GDP 501 B 1 
HETATM 10 C C5' GDP . . . K 8 14.973 47.249 18.48 1 54.45 ? C5' GDP 501 B 1 
HETATM 11 C C4' GDP . . . K 8 14.401 47.266 19.887 1 57.43 ? C4' GDP 501 B 1 
HETATM 12 O O4' GDP . . . K 8 13.954 48.596 20.156 1 50.47 ? O4' GDP 501 B 1 
HETATM 13 C C3' GDP . . . K 8 13.19 46.365 19.991 1 61.33 ? C3' GDP 501 B 1 
HETATM 14 O O3' GDP . . . K 8 13.132 45.825 21.314 1 57.29 ? O3' GDP 501 B 1 
HETATM 15 C C2' GDP . . . K 8 12.014 47.289 19.778 1 55.65 ? C2' GDP 501 B 1 
HETATM 16 O O2' GDP . . . K 8 10.902 46.858 20.563 1 59.54 ? O2' GDP 501 B 1 
HETATM 17 C C1' GDP . . . K 8 12.535 48.627 20.268 1 56.56 ? C1' GDP 501 B 1 
HETATM 18 N N9 GDP . . . K 8 12.043 49.746 19.443 1 59.96 ? N9 GDP 501 B 1 
HETATM 19 C C8 GDP . . . K 8 12.255 49.944 18.13 1 57 ? C8 GDP 501 B 1 
HETATM 20 N N7 GDP . . . K 8 11.659 51.095 17.72 1 61.17 ? N7 GDP 501 B 1 
HETATM 21 C C5 GDP . . . K 8 11.065 51.652 18.792 1 55.07 ? C5 GDP 501 B 1 
HETATM 22 C C6 GDP . . . K 8 10.274 52.866 19.075 1 55.33 ? C6 GDP 501 B 1 
HETATM 23 O O6 GDP . . . K 8 10.007 53.676 18.166 1 62.32 ? O6 GDP 501 B 1 
HETATM 24 N N1 GDP . . . K 8 9.851 53.065 20.329 1 61.25 ? N1 GDP 501 B 1 
HETATM 25 C C2 GDP . . . K 8 10.124 52.206 21.331 1 60.53 ? C2 GDP 501 B 1 
HETATM 26 N N2 GDP . . . K 8 9.663 52.465 22.58 1 53.94 ? N2 GDP 501 B 1 
HETATM 27 N N3 GDP . . . K 8 10.846 51.076 21.141 1 57.84 ? N3 GDP 501 B 1 
HETATM 28 C C4 GDP . . . K 8 11.327 50.758 19.922 1 59.64 ? C4 GDP 501 B 1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           28 
#