data_5S5W # _model_server_result.job_id 9FS3_iEyHE8ozue1WMv5xg _model_server_result.datetime_utc '2024-11-07 16:28:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s5w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 5S5W # _exptl.entry_id 5S5W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S5W _cell.length_a 104.87 _cell.length_b 158.35 _cell.length_c 178.88 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S5W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc10 H MG MG . A MG 502 1_555 X O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc11 H MG MG . A MG 502 1_555 X O HOH . A HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc12 H MG MG . A MG 502 1_555 X O HOH . A HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc13 H MG MG . A MG 502 1_555 X O HOH . A HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc14 J CA CA . A CA 504 1_555 X O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc15 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc16 B OE1 GLU 111 B GLU 113 1_555 M CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc17 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc18 L MG MG . B MG 502 1_555 Y O HOH . B HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc19 L MG MG . B MG 502 1_555 Y O HOH . B HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.91 ? metalc ? metalc20 L MG MG . B MG 502 1_555 Y O HOH . B HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc21 L MG MG . B MG 502 1_555 Z O HOH . C HOH 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc22 M CA CA . B CA 503 4_455 C O TYR 282 C TYR 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.103 ? metalc ? metalc23 C OD1 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc24 C OD2 ASP 39 C ASP 39 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc25 C O THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc26 C OG1 THR 41 C THR 41 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc27 C O GLY 44 C GLY 44 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc28 C OE1 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc29 C OE2 GLU 55 C GLU 55 1_555 R CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc30 P O1G GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc31 P O1B GTP . C GTP 501 1_555 Q MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc32 Q MG MG . C MG 502 1_555 Z O HOH . C HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc33 Q MG MG . C MG 502 1_555 Z O HOH . C HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc34 Q MG MG . C MG 502 1_555 Z O HOH . C HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc35 Q MG MG . C MG 502 1_555 Z O HOH . C HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc36 R CA CA . C CA 503 1_555 Z O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc37 D OE1 GLN 11 D GLN 11 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc38 T O1A GDP . D GDP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc39 U MG MG . D MG 502 1_555 AA O HOH . D HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc40 F OE2 GLU 331 F GLU 331 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc41 V O3G ACP . F ACP 401 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc42 V O1B ACP . F ACP 401 1_555 W MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S5W _atom_sites.fract_transf_matrix[1][1] 0.009536 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 7 CA B 1 503 503 CA CA . N 9 MES B 1 504 504 MES MES . O 10 STV B 1 505 601 STV DRG . P 5 GTP C 1 501 501 GTP GTP . Q 6 MG C 1 502 502 MG MG . R 7 CA C 1 503 503 CA CA . S 10 STV C 1 504 601 STV DRG . T 8 GDP D 1 501 501 GDP GDP . U 6 MG D 1 502 502 MG MG . V 11 ACP F 1 401 401 ACP ACP . W 6 MG F 1 402 402 MG MG . X 12 HOH A 1 601 52 HOH HOH . X 12 HOH A 2 602 83 HOH HOH . X 12 HOH A 3 603 1334 HOH HOH . X 12 HOH A 4 604 25 HOH HOH . X 12 HOH A 5 605 47 HOH HOH . X 12 HOH A 6 606 123 HOH HOH . X 12 HOH A 7 607 198 HOH HOH . X 12 HOH A 8 608 208 HOH HOH . X 12 HOH A 9 609 60 HOH HOH . X 12 HOH A 10 610 35 HOH HOH . X 12 HOH A 11 611 161 HOH HOH . X 12 HOH A 12 612 152 HOH HOH . X 12 HOH A 13 613 191 HOH HOH . X 12 HOH A 14 614 29 HOH HOH . X 12 HOH A 15 615 88 HOH HOH . X 12 HOH A 16 616 1340 HOH HOH . X 12 HOH A 17 617 94 HOH HOH . X 12 HOH A 18 618 9 HOH HOH . X 12 HOH A 19 619 140 HOH HOH . X 12 HOH A 20 620 151 HOH HOH . X 12 HOH A 21 621 109 HOH HOH . X 12 HOH A 22 622 78 HOH HOH . X 12 HOH A 23 623 1559 HOH HOH . X 12 HOH A 24 624 97 HOH HOH . X 12 HOH A 25 625 434 HOH HOH . X 12 HOH A 26 626 135 HOH HOH . X 12 HOH A 27 627 40 HOH HOH . X 12 HOH A 28 628 106 HOH HOH . X 12 HOH A 29 629 102 HOH HOH . X 12 HOH A 30 630 87 HOH HOH . X 12 HOH A 31 631 125 HOH HOH . X 12 HOH A 32 632 195 HOH HOH . X 12 HOH A 33 633 228 HOH HOH . X 12 HOH A 34 634 118 HOH HOH . X 12 HOH A 35 635 65 HOH HOH . X 12 HOH A 36 636 81 HOH HOH . X 12 HOH A 37 637 93 HOH HOH . X 12 HOH A 38 638 196 HOH HOH . X 12 HOH A 39 639 104 HOH HOH . X 12 HOH A 40 640 180 HOH HOH . X 12 HOH A 41 641 273 HOH HOH . X 12 HOH A 42 642 126 HOH HOH . X 12 HOH A 43 643 220 HOH HOH . X 12 HOH A 44 644 24 HOH HOH . X 12 HOH A 45 645 107 HOH HOH . X 12 HOH A 46 646 203 HOH HOH . X 12 HOH A 47 647 870 HOH HOH . X 12 HOH A 48 648 174 HOH HOH . X 12 HOH A 49 649 101 HOH HOH . X 12 HOH A 50 650 95 HOH HOH . X 12 HOH A 51 651 258 HOH HOH . X 12 HOH A 52 652 257 HOH HOH . X 12 HOH A 53 653 43 HOH HOH . X 12 HOH A 54 654 156 HOH HOH . X 12 HOH A 55 655 201 HOH HOH . X 12 HOH A 56 656 263 HOH HOH . X 12 HOH A 57 657 295 HOH HOH . X 12 HOH A 58 658 267 HOH HOH . X 12 HOH A 59 659 194 HOH HOH . X 12 HOH A 60 660 141 HOH HOH . X 12 HOH A 61 661 297 HOH HOH . X 12 HOH A 62 662 291 HOH HOH . Y 12 HOH B 1 601 347 HOH HOH . Y 12 HOH B 2 602 331 HOH HOH . Y 12 HOH B 3 603 316 HOH HOH . Y 12 HOH B 4 604 1561 HOH HOH . Y 12 HOH B 5 605 351 HOH HOH . Y 12 HOH B 6 606 825 HOH HOH . Y 12 HOH B 7 607 349 HOH HOH . Y 12 HOH B 8 608 335 HOH HOH . Y 12 HOH B 9 609 330 HOH HOH . Y 12 HOH B 10 610 358 HOH HOH . Y 12 HOH B 11 611 361 HOH HOH . Y 12 HOH B 12 612 378 HOH HOH . Y 12 HOH B 13 613 451 HOH HOH . Y 12 HOH B 14 614 428 HOH HOH . Y 12 HOH B 15 615 430 HOH HOH . Y 12 HOH B 16 616 454 HOH HOH . Y 12 HOH B 17 617 453 HOH HOH . Y 12 HOH B 18 618 377 HOH HOH . Y 12 HOH B 19 619 363 HOH HOH . Y 12 HOH B 20 620 416 HOH HOH . Y 12 HOH B 21 621 470 HOH HOH . Y 12 HOH B 22 622 375 HOH HOH . Y 12 HOH B 23 623 382 HOH HOH . Y 12 HOH B 24 624 362 HOH HOH . Y 12 HOH B 25 625 457 HOH HOH . Y 12 HOH B 26 626 442 HOH HOH . Y 12 HOH B 27 627 407 HOH HOH . Y 12 HOH B 28 628 460 HOH HOH . Y 12 HOH B 29 629 423 HOH HOH . Y 12 HOH B 30 630 438 HOH HOH . Y 12 HOH B 31 631 412 HOH HOH . Y 12 HOH B 32 632 461 HOH HOH . Y 12 HOH B 33 633 432 HOH HOH . Y 12 HOH B 34 634 1558 HOH HOH . Y 12 HOH B 35 635 448 HOH HOH . Y 12 HOH B 36 636 474 HOH HOH . Y 12 HOH B 37 637 487 HOH HOH . Y 12 HOH B 38 638 1560 HOH HOH . Y 12 HOH B 39 639 505 HOH HOH . Y 12 HOH B 40 640 458 HOH HOH . Y 12 HOH B 41 641 469 HOH HOH . Y 12 HOH B 42 642 526 HOH HOH . Y 12 HOH B 43 643 345 HOH HOH . Y 12 HOH B 44 644 405 HOH HOH . Y 12 HOH B 45 645 529 HOH HOH . Y 12 HOH B 46 646 481 HOH HOH . Y 12 HOH B 47 647 318 HOH HOH . Y 12 HOH B 48 648 387 HOH HOH . Y 12 HOH B 49 649 337 HOH HOH . Y 12 HOH B 50 650 509 HOH HOH . Y 12 HOH B 51 651 385 HOH HOH . Y 12 HOH B 52 652 1362 HOH HOH . Y 12 HOH B 53 653 503 HOH HOH . Y 12 HOH B 54 654 383 HOH HOH . Y 12 HOH B 55 655 372 HOH HOH . Y 12 HOH B 56 656 903 HOH HOH . Y 12 HOH B 57 657 484 HOH HOH . Y 12 HOH B 58 658 586 HOH HOH . Y 12 HOH B 59 659 422 HOH HOH . Y 12 HOH B 60 660 557 HOH HOH . Y 12 HOH B 61 661 479 HOH HOH . Y 12 HOH B 62 662 508 HOH HOH . Y 12 HOH B 63 663 436 HOH HOH . Y 12 HOH B 64 664 414 HOH HOH . Y 12 HOH B 65 665 559 HOH HOH . Y 12 HOH B 66 666 564 HOH HOH . Y 12 HOH B 67 667 540 HOH HOH . Y 12 HOH B 68 668 573 HOH HOH . Y 12 HOH B 69 669 326 HOH HOH . Y 12 HOH B 70 670 534 HOH HOH . Y 12 HOH B 71 671 551 HOH HOH . Y 12 HOH B 72 672 560 HOH HOH . Y 12 HOH B 73 673 617 HOH HOH . Y 12 HOH B 74 674 528 HOH HOH . Y 12 HOH B 75 675 597 HOH HOH . Y 12 HOH B 76 676 1554 HOH HOH . Y 12 HOH B 77 677 327 HOH HOH . Y 12 HOH B 78 678 290 HOH HOH . Y 12 HOH B 79 679 605 HOH HOH . Y 12 HOH B 80 680 1556 HOH HOH . Y 12 HOH B 81 681 614 HOH HOH . Y 12 HOH B 82 682 610 HOH HOH . Y 12 HOH B 83 683 520 HOH HOH . Y 12 HOH B 84 684 619 HOH HOH . Z 12 HOH C 1 601 643 HOH HOH . Z 12 HOH C 2 602 629 HOH HOH . Z 12 HOH C 3 603 1016 HOH HOH . Z 12 HOH C 4 604 641 HOH HOH . Z 12 HOH C 5 605 647 HOH HOH . Z 12 HOH C 6 606 887 HOH HOH . Z 12 HOH C 7 607 623 HOH HOH . Z 12 HOH C 8 608 796 HOH HOH . Z 12 HOH C 9 609 660 HOH HOH . Z 12 HOH C 10 610 659 HOH HOH . Z 12 HOH C 11 611 753 HOH HOH . Z 12 HOH C 12 612 1142 HOH HOH . Z 12 HOH C 13 613 724 HOH HOH . Z 12 HOH C 14 614 664 HOH HOH . Z 12 HOH C 15 615 645 HOH HOH . Z 12 HOH C 16 616 694 HOH HOH . Z 12 HOH C 17 617 741 HOH HOH . Z 12 HOH C 18 618 859 HOH HOH . Z 12 HOH C 19 619 676 HOH HOH . Z 12 HOH C 20 620 800 HOH HOH . Z 12 HOH C 21 621 931 HOH HOH . Z 12 HOH C 22 622 770 HOH HOH . Z 12 HOH C 23 623 769 HOH HOH . Z 12 HOH C 24 624 735 HOH HOH . Z 12 HOH C 25 625 750 HOH HOH . Z 12 HOH C 26 626 763 HOH HOH . Z 12 HOH C 27 627 732 HOH HOH . Z 12 HOH C 28 628 655 HOH HOH . Z 12 HOH C 29 629 725 HOH HOH . Z 12 HOH C 30 630 740 HOH HOH . Z 12 HOH C 31 631 1555 HOH HOH . Z 12 HOH C 32 632 746 HOH HOH . Z 12 HOH C 33 633 669 HOH HOH . Z 12 HOH C 34 634 687 HOH HOH . Z 12 HOH C 35 635 894 HOH HOH . Z 12 HOH C 36 636 792 HOH HOH . Z 12 HOH C 37 637 738 HOH HOH . Z 12 HOH C 38 638 692 HOH HOH . Z 12 HOH C 39 639 730 HOH HOH . Z 12 HOH C 40 640 744 HOH HOH . Z 12 HOH C 41 641 752 HOH HOH . Z 12 HOH C 42 642 677 HOH HOH . Z 12 HOH C 43 643 791 HOH HOH . Z 12 HOH C 44 644 701 HOH HOH . Z 12 HOH C 45 645 714 HOH HOH . Z 12 HOH C 46 646 872 HOH HOH . Z 12 HOH C 47 647 1162 HOH HOH . Z 12 HOH C 48 648 924 HOH HOH . Z 12 HOH C 49 649 723 HOH HOH . Z 12 HOH C 50 650 810 HOH HOH . Z 12 HOH C 51 651 698 HOH HOH . Z 12 HOH C 52 652 782 HOH HOH . Z 12 HOH C 53 653 817 HOH HOH . Z 12 HOH C 54 654 689 HOH HOH . Z 12 HOH C 55 655 751 HOH HOH . Z 12 HOH C 56 656 705 HOH HOH . Z 12 HOH C 57 657 803 HOH HOH . Z 12 HOH C 58 658 757 HOH HOH . Z 12 HOH C 59 659 710 HOH HOH . Z 12 HOH C 60 660 761 HOH HOH . Z 12 HOH C 61 661 663 HOH HOH . Z 12 HOH C 62 662 1002 HOH HOH . Z 12 HOH C 63 663 913 HOH HOH . Z 12 HOH C 64 664 834 HOH HOH . Z 12 HOH C 65 665 742 HOH HOH . Z 12 HOH C 66 666 829 HOH HOH . Z 12 HOH C 67 667 915 HOH HOH . Z 12 HOH C 68 668 719 HOH HOH . Z 12 HOH C 69 669 468 HOH HOH . Z 12 HOH C 70 670 789 HOH HOH . Z 12 HOH C 71 671 811 HOH HOH . Z 12 HOH C 72 672 808 HOH HOH . Z 12 HOH C 73 673 679 HOH HOH . Z 12 HOH C 74 674 873 HOH HOH . Z 12 HOH C 75 675 813 HOH HOH . Z 12 HOH C 76 676 764 HOH HOH . Z 12 HOH C 77 677 786 HOH HOH . Z 12 HOH C 78 678 739 HOH HOH . Z 12 HOH C 79 679 888 HOH HOH . Z 12 HOH C 80 680 747 HOH HOH . Z 12 HOH C 81 681 868 HOH HOH . Z 12 HOH C 82 682 716 HOH HOH . Z 12 HOH C 83 683 1027 HOH HOH . Z 12 HOH C 84 684 748 HOH HOH . Z 12 HOH C 85 685 889 HOH HOH . Z 12 HOH C 86 686 880 HOH HOH . Z 12 HOH C 87 687 721 HOH HOH . Z 12 HOH C 88 688 717 HOH HOH . Z 12 HOH C 89 689 936 HOH HOH . Z 12 HOH C 90 690 749 HOH HOH . Z 12 HOH C 91 691 733 HOH HOH . Z 12 HOH C 92 692 773 HOH HOH . Z 12 HOH C 93 693 848 HOH HOH . Z 12 HOH C 94 694 971 HOH HOH . Z 12 HOH C 95 695 840 HOH HOH . Z 12 HOH C 96 696 819 HOH HOH . Z 12 HOH C 97 697 670 HOH HOH . Z 12 HOH C 98 698 765 HOH HOH . Z 12 HOH C 99 699 914 HOH HOH . Z 12 HOH C 100 700 797 HOH HOH . Z 12 HOH C 101 701 807 HOH HOH . Z 12 HOH C 102 702 883 HOH HOH . Z 12 HOH C 103 703 818 HOH HOH . Z 12 HOH C 104 704 906 HOH HOH . Z 12 HOH C 105 705 806 HOH HOH . Z 12 HOH C 106 706 771 HOH HOH . Z 12 HOH C 107 707 821 HOH HOH . Z 12 HOH C 108 708 858 HOH HOH . Z 12 HOH C 109 709 910 HOH HOH . Z 12 HOH C 110 710 877 HOH HOH . Z 12 HOH C 111 711 843 HOH HOH . Z 12 HOH C 112 712 875 HOH HOH . Z 12 HOH C 113 713 809 HOH HOH . Z 12 HOH C 114 714 955 HOH HOH . Z 12 HOH C 115 715 956 HOH HOH . Z 12 HOH C 116 716 882 HOH HOH . Z 12 HOH C 117 717 787 HOH HOH . Z 12 HOH C 118 718 923 HOH HOH . Z 12 HOH C 119 719 874 HOH HOH . Z 12 HOH C 120 720 1041 HOH HOH . Z 12 HOH C 121 721 953 HOH HOH . Z 12 HOH C 122 722 897 HOH HOH . Z 12 HOH C 123 723 833 HOH HOH . Z 12 HOH C 124 724 1024 HOH HOH . Z 12 HOH C 125 725 885 HOH HOH . Z 12 HOH C 126 726 683 HOH HOH . Z 12 HOH C 127 727 737 HOH HOH . Z 12 HOH C 128 728 822 HOH HOH . Z 12 HOH C 129 729 650 HOH HOH . Z 12 HOH C 130 730 1007 HOH HOH . Z 12 HOH C 131 731 980 HOH HOH . Z 12 HOH C 132 732 902 HOH HOH . Z 12 HOH C 133 733 852 HOH HOH . Z 12 HOH C 134 734 991 HOH HOH . Z 12 HOH C 135 735 839 HOH HOH . Z 12 HOH C 136 736 862 HOH HOH . Z 12 HOH C 137 737 998 HOH HOH . Z 12 HOH C 138 738 775 HOH HOH . Z 12 HOH C 139 739 979 HOH HOH . Z 12 HOH C 140 740 847 HOH HOH . Z 12 HOH C 141 741 901 HOH HOH . Z 12 HOH C 142 742 864 HOH HOH . Z 12 HOH C 143 743 801 HOH HOH . Z 12 HOH C 144 744 977 HOH HOH . Z 12 HOH C 145 745 909 HOH HOH . Z 12 HOH C 146 746 999 HOH HOH . Z 12 HOH C 147 747 928 HOH HOH . Z 12 HOH C 148 748 1025 HOH HOH . Z 12 HOH C 149 749 954 HOH HOH . Z 12 HOH C 150 750 986 HOH HOH . Z 12 HOH C 151 751 1003 HOH HOH . Z 12 HOH C 152 752 938 HOH HOH . Z 12 HOH C 153 753 762 HOH HOH . Z 12 HOH C 154 754 1000 HOH HOH . Z 12 HOH C 155 755 995 HOH HOH . Z 12 HOH C 156 756 973 HOH HOH . Z 12 HOH C 157 757 937 HOH HOH . Z 12 HOH C 158 758 1056 HOH HOH . Z 12 HOH C 159 759 1006 HOH HOH . Z 12 HOH C 160 760 898 HOH HOH . Z 12 HOH C 161 761 1023 HOH HOH . Z 12 HOH C 162 762 1001 HOH HOH . Z 12 HOH C 163 763 1019 HOH HOH . Z 12 HOH C 164 764 226 HOH HOH . Z 12 HOH C 165 765 767 HOH HOH . Z 12 HOH C 166 766 1059 HOH HOH . Z 12 HOH C 167 767 1054 HOH HOH . Z 12 HOH C 168 768 1048 HOH HOH . Z 12 HOH C 169 769 1044 HOH HOH . Z 12 HOH C 170 770 1060 HOH HOH . Z 12 HOH C 171 771 1557 HOH HOH . Z 12 HOH C 172 772 976 HOH HOH . Z 12 HOH C 173 773 943 HOH HOH . Z 12 HOH C 174 774 1065 HOH HOH . Z 12 HOH C 175 775 1076 HOH HOH . Z 12 HOH C 176 776 1064 HOH HOH . Z 12 HOH C 177 777 1053 HOH HOH . Z 12 HOH C 178 778 1082 HOH HOH . Z 12 HOH C 179 779 1094 HOH HOH . Z 12 HOH C 180 780 1095 HOH HOH . AA 12 HOH D 1 601 1099 HOH HOH . AA 12 HOH D 2 602 1211 HOH HOH . AA 12 HOH D 3 603 713 HOH HOH . AA 12 HOH D 4 604 1145 HOH HOH . AA 12 HOH D 5 605 1101 HOH HOH . AA 12 HOH D 6 606 1288 HOH HOH . AA 12 HOH D 7 607 1178 HOH HOH . AA 12 HOH D 8 608 1172 HOH HOH . AA 12 HOH D 9 609 1144 HOH HOH . AA 12 HOH D 10 610 1202 HOH HOH . AA 12 HOH D 11 611 1166 HOH HOH . AA 12 HOH D 12 612 696 HOH HOH . AA 12 HOH D 13 613 1247 HOH HOH . AA 12 HOH D 14 614 1177 HOH HOH . AA 12 HOH D 15 615 1200 HOH HOH . AA 12 HOH D 16 616 1188 HOH HOH . AA 12 HOH D 17 617 1212 HOH HOH . AA 12 HOH D 18 618 1186 HOH HOH . AA 12 HOH D 19 619 1237 HOH HOH . AA 12 HOH D 20 620 1234 HOH HOH . AA 12 HOH D 21 621 1220 HOH HOH . AA 12 HOH D 22 622 1193 HOH HOH . AA 12 HOH D 23 623 1191 HOH HOH . AA 12 HOH D 24 624 1245 HOH HOH . AA 12 HOH D 25 625 1277 HOH HOH . AA 12 HOH D 26 626 1222 HOH HOH . AA 12 HOH D 27 627 1274 HOH HOH . AA 12 HOH D 28 628 1257 HOH HOH . AA 12 HOH D 29 629 1180 HOH HOH . AA 12 HOH D 30 630 1120 HOH HOH . AA 12 HOH D 31 631 667 HOH HOH . AA 12 HOH D 32 632 1258 HOH HOH . BA 12 HOH E 1 201 379 HOH HOH . BA 12 HOH E 2 202 393 HOH HOH . BA 12 HOH E 3 203 1353 HOH HOH . BA 12 HOH E 4 204 1365 HOH HOH . BA 12 HOH E 5 205 1406 HOH HOH . BA 12 HOH E 6 206 577 HOH HOH . BA 12 HOH E 7 207 1376 HOH HOH . BA 12 HOH E 8 208 1392 HOH HOH . BA 12 HOH E 9 209 1304 HOH HOH . CA 12 HOH F 1 501 1485 HOH HOH . CA 12 HOH F 2 502 1474 HOH HOH . CA 12 HOH F 3 503 1462 HOH HOH . CA 12 HOH F 4 504 1484 HOH HOH . CA 12 HOH F 5 505 1133 HOH HOH . CA 12 HOH F 6 506 1473 HOH HOH . CA 12 HOH F 7 507 1475 HOH HOH . CA 12 HOH F 8 508 1537 HOH HOH . CA 12 HOH F 9 509 1506 HOH HOH . CA 12 HOH F 10 510 1513 HOH HOH . CA 12 HOH F 11 511 1542 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . K 8 19.01 49.503 15.774 1 47.68 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . K 8 18.409 50.443 14.753 1 44.13 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . K 8 19.603 50.264 16.936 1 40.95 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . K 8 20.087 48.662 15.123 1 45.58 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . K 8 17.907 48.486 16.344 1 51.81 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . K 8 16.468 48.945 16.897 1 48.54 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . K 8 15.399 48.799 15.838 1 47.05 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . K 8 16.502 50.352 17.447 1 44.17 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . K 8 16.303 47.882 18.09 1 46.53 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . K 8 15.148 47.061 18.206 1 52.12 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . K 8 14.655 47.125 19.644 1 50.44 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . K 8 14.195 48.452 19.896 1 46.87 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . K 8 13.463 46.219 19.844 1 52.96 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . K 8 13.452 45.822 21.219 1 49.7 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . K 8 12.283 47.117 19.544 1 51.32 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . K 8 11.129 46.706 20.277 1 56.88 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . K 8 12.775 48.47 20.023 1 44.69 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . K 8 12.304 49.609 19.209 1 55.42 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . K 8 12.575 49.845 17.91 1 55.08 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . K 8 11.997 51.007 17.503 1 48.33 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . K 8 11.362 51.532 18.564 1 47 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . K 8 10.562 52.74 18.838 1 49.11 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . K 8 10.338 53.572 17.935 1 58.24 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . K 8 10.082 52.907 20.074 1 52.68 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . K 8 10.307 52.027 21.067 1 50.68 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . K 8 9.783 52.274 22.293 1 52.77 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . K 8 11.034 50.9 20.891 1 48.87 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . K 8 11.569 50.611 19.684 1 52.89 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 158 _model_server_stats.parse_time_ms 57 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 28 #