data_5S63 # _model_server_result.job_id 8-32qcnAH2CHO-E7kdJYXg _model_server_result.datetime_utc '2024-10-19 20:09:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 5S63 # _exptl.entry_id 5S63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5S63 _cell.length_a 105.22 _cell.length_b 159.1 _cell.length_c 179.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc10 H MG MG . A MG 502 1_555 W O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc11 H MG MG . A MG 502 1_555 W O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc12 H MG MG . A MG 502 1_555 W O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? metalc ? metalc13 H MG MG . A MG 502 1_555 W O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc14 I CA CA . A CA 503 1_555 W O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc15 W O HOH . A HOH 628 1_555 T CA CA . E CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? metalc ? metalc16 B OE1 GLN 11 B GLN 11 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc17 B OE1 GLU 111 B GLU 113 1_555 L CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc18 B OE2 GLU 111 B GLU 113 1_555 L CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.1 ? metalc ? metalc19 J O1A GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc20 K MG MG . B MG 502 1_555 X O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc21 K MG MG . B MG 502 1_555 X O HOH . B HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc22 K MG MG . B MG 502 1_555 X O HOH . B HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc23 K MG MG . B MG 502 1_555 Y O HOH . C HOH 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc24 L CA CA . B CA 503 4_455 C OE1 GLU 284 C GLU 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? metalc ? metalc25 C OD1 ASP 39 C ASP 39 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc26 C OD2 ASP 39 C ASP 39 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc27 C O THR 41 C THR 41 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc28 C OG1 THR 41 C THR 41 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc29 C O GLY 44 C GLY 44 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc30 C OE1 GLU 55 C GLU 55 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc31 C OE2 GLU 55 C GLU 55 1_555 Q CA CA . C CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc32 O O1G GTP . C GTP 602 1_555 P MG MG . C MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? metalc ? metalc33 O O1B GTP . C GTP 602 1_555 P MG MG . C MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc34 P MG MG . C MG 603 1_555 Y O HOH . C HOH 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc35 P MG MG . C MG 603 1_555 Y O HOH . C HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc36 P MG MG . C MG 603 1_555 Y O HOH . C HOH 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? metalc ? metalc37 P MG MG . C MG 603 1_555 Y O HOH . C HOH 755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? metalc ? metalc38 D OE1 GLN 11 D GLN 11 1_555 S MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc39 R O1A GDP . D GDP 501 1_555 S MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc40 F OE2 GLU 331 F GLU 331 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc41 U O3G ACP . F ACP 401 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc42 U O1B ACP . F ACP 401 1_555 V MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5S63 _atom_sites.fract_transf_matrix[1][1] 0.009504 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 7 CA B 1 503 503 CA CA . M 9 MES B 1 504 504 MES MES . N 10 NV7 C 1 601 601 NV7 DRG . O 5 GTP C 1 602 501 GTP GTP . P 6 MG C 1 603 502 MG MG . Q 7 CA C 1 604 503 CA CA . R 8 GDP D 1 501 501 GDP GDP . S 6 MG D 1 502 502 MG MG . T 7 CA E 1 201 504 CA CA . U 11 ACP F 1 401 401 ACP ACP . V 6 MG F 1 402 402 MG MG . W 12 HOH A 1 601 202 HOH HOH . W 12 HOH A 2 602 9 HOH HOH . W 12 HOH A 3 603 47 HOH HOH . W 12 HOH A 4 604 29 HOH HOH . W 12 HOH A 5 605 1550 HOH HOH . W 12 HOH A 6 606 126 HOH HOH . W 12 HOH A 7 607 1548 HOH HOH . W 12 HOH A 8 608 52 HOH HOH . W 12 HOH A 9 609 108 HOH HOH . W 12 HOH A 10 610 22 HOH HOH . W 12 HOH A 11 611 719 HOH HOH . W 12 HOH A 12 612 87 HOH HOH . W 12 HOH A 13 613 109 HOH HOH . W 12 HOH A 14 614 194 HOH HOH . W 12 HOH A 15 615 1551 HOH HOH . W 12 HOH A 16 616 258 HOH HOH . W 12 HOH A 17 617 65 HOH HOH . W 12 HOH A 18 618 60 HOH HOH . W 12 HOH A 19 619 1549 HOH HOH . W 12 HOH A 20 620 161 HOH HOH . W 12 HOH A 21 621 174 HOH HOH . W 12 HOH A 22 622 97 HOH HOH . W 12 HOH A 23 623 135 HOH HOH . W 12 HOH A 24 624 198 HOH HOH . W 12 HOH A 25 625 125 HOH HOH . W 12 HOH A 26 626 167 HOH HOH . W 12 HOH A 27 627 118 HOH HOH . W 12 HOH A 28 628 213 HOH HOH . W 12 HOH A 29 629 172 HOH HOH . W 12 HOH A 30 630 228 HOH HOH . W 12 HOH A 31 631 196 HOH HOH . W 12 HOH A 32 632 273 HOH HOH . W 12 HOH A 33 633 203 HOH HOH . W 12 HOH A 34 634 267 HOH HOH . W 12 HOH A 35 635 226 HOH HOH . X 12 HOH B 1 601 1554 HOH HOH . X 12 HOH B 2 602 335 HOH HOH . X 12 HOH B 3 603 387 HOH HOH . X 12 HOH B 4 604 361 HOH HOH . X 12 HOH B 5 605 442 HOH HOH . X 12 HOH B 6 606 550 HOH HOH . X 12 HOH B 7 607 1546 HOH HOH . X 12 HOH B 8 608 451 HOH HOH . X 12 HOH B 9 609 508 HOH HOH . X 12 HOH B 10 610 351 HOH HOH . X 12 HOH B 11 611 377 HOH HOH . X 12 HOH B 12 612 345 HOH HOH . X 12 HOH B 13 613 375 HOH HOH . X 12 HOH B 14 614 362 HOH HOH . X 12 HOH B 15 615 502 HOH HOH . X 12 HOH B 16 616 423 HOH HOH . X 12 HOH B 17 617 505 HOH HOH . X 12 HOH B 18 618 428 HOH HOH . X 12 HOH B 19 619 817 HOH HOH . X 12 HOH B 20 620 1362 HOH HOH . X 12 HOH B 21 621 358 HOH HOH . X 12 HOH B 22 622 432 HOH HOH . X 12 HOH B 23 623 382 HOH HOH . X 12 HOH B 24 624 481 HOH HOH . X 12 HOH B 25 625 412 HOH HOH . X 12 HOH B 26 626 454 HOH HOH . X 12 HOH B 27 627 436 HOH HOH . X 12 HOH B 28 628 503 HOH HOH . X 12 HOH B 29 629 1547 HOH HOH . X 12 HOH B 30 630 526 HOH HOH . X 12 HOH B 31 631 422 HOH HOH . X 12 HOH B 32 632 487 HOH HOH . X 12 HOH B 33 633 516 HOH HOH . X 12 HOH B 34 634 416 HOH HOH . X 12 HOH B 35 635 484 HOH HOH . X 12 HOH B 36 636 493 HOH HOH . X 12 HOH B 37 637 372 HOH HOH . X 12 HOH B 38 638 605 HOH HOH . X 12 HOH B 39 639 610 HOH HOH . Y 12 HOH C 1 701 623 HOH HOH . Y 12 HOH C 2 702 723 HOH HOH . Y 12 HOH C 3 703 621 HOH HOH . Y 12 HOH C 4 704 692 HOH HOH . Y 12 HOH C 5 705 770 HOH HOH . Y 12 HOH C 6 706 886 HOH HOH . Y 12 HOH C 7 707 753 HOH HOH . Y 12 HOH C 8 708 882 HOH HOH . Y 12 HOH C 9 709 796 HOH HOH . Y 12 HOH C 10 710 748 HOH HOH . Y 12 HOH C 11 711 669 HOH HOH . Y 12 HOH C 12 712 792 HOH HOH . Y 12 HOH C 13 713 752 HOH HOH . Y 12 HOH C 14 714 763 HOH HOH . Y 12 HOH C 15 715 1101 HOH HOH . Y 12 HOH C 16 716 655 HOH HOH . Y 12 HOH C 17 717 765 HOH HOH . Y 12 HOH C 18 718 995 HOH HOH . Y 12 HOH C 19 719 658 HOH HOH . Y 12 HOH C 20 720 738 HOH HOH . Y 12 HOH C 21 721 913 HOH HOH . Y 12 HOH C 22 722 687 HOH HOH . Y 12 HOH C 23 723 696 HOH HOH . Y 12 HOH C 24 724 730 HOH HOH . Y 12 HOH C 25 725 698 HOH HOH . Y 12 HOH C 26 726 694 HOH HOH . Y 12 HOH C 27 727 803 HOH HOH . Y 12 HOH C 28 728 710 HOH HOH . Y 12 HOH C 29 729 659 HOH HOH . Y 12 HOH C 30 730 750 HOH HOH . Y 12 HOH C 31 731 741 HOH HOH . Y 12 HOH C 32 732 714 HOH HOH . Y 12 HOH C 33 733 677 HOH HOH . Y 12 HOH C 34 734 789 HOH HOH . Y 12 HOH C 35 735 739 HOH HOH . Y 12 HOH C 36 736 749 HOH HOH . Y 12 HOH C 37 737 746 HOH HOH . Y 12 HOH C 38 738 705 HOH HOH . Y 12 HOH C 39 739 735 HOH HOH . Y 12 HOH C 40 740 810 HOH HOH . Y 12 HOH C 41 741 645 HOH HOH . Y 12 HOH C 42 742 742 HOH HOH . Y 12 HOH C 43 743 744 HOH HOH . Y 12 HOH C 44 744 868 HOH HOH . Y 12 HOH C 45 745 1545 HOH HOH . Y 12 HOH C 46 746 840 HOH HOH . Y 12 HOH C 47 747 830 HOH HOH . Y 12 HOH C 48 748 782 HOH HOH . Y 12 HOH C 49 749 663 HOH HOH . Y 12 HOH C 50 750 670 HOH HOH . Y 12 HOH C 51 751 829 HOH HOH . Y 12 HOH C 52 752 1553 HOH HOH . Y 12 HOH C 53 753 679 HOH HOH . Y 12 HOH C 54 754 676 HOH HOH . Y 12 HOH C 55 755 1552 HOH HOH . Y 12 HOH C 56 756 906 HOH HOH . Y 12 HOH C 57 757 747 HOH HOH . Y 12 HOH C 58 758 971 HOH HOH . Y 12 HOH C 59 759 757 HOH HOH . Y 12 HOH C 60 760 894 HOH HOH . Y 12 HOH C 61 761 909 HOH HOH . Y 12 HOH C 62 762 733 HOH HOH . Y 12 HOH C 63 763 938 HOH HOH . Y 12 HOH C 64 764 825 HOH HOH . Y 12 HOH C 65 765 701 HOH HOH . Y 12 HOH C 66 766 717 HOH HOH . Y 12 HOH C 67 767 876 HOH HOH . Y 12 HOH C 68 768 807 HOH HOH . Y 12 HOH C 69 769 811 HOH HOH . Y 12 HOH C 70 770 847 HOH HOH . Y 12 HOH C 71 771 852 HOH HOH . Y 12 HOH C 72 772 517 HOH HOH . Y 12 HOH C 73 773 797 HOH HOH . Y 12 HOH C 74 774 764 HOH HOH . Y 12 HOH C 75 775 818 HOH HOH . Y 12 HOH C 76 776 872 HOH HOH . Y 12 HOH C 77 777 972 HOH HOH . Y 12 HOH C 78 778 1041 HOH HOH . Y 12 HOH C 79 779 806 HOH HOH . Y 12 HOH C 80 780 848 HOH HOH . Y 12 HOH C 81 781 859 HOH HOH . Y 12 HOH C 82 782 914 HOH HOH . Y 12 HOH C 83 783 880 HOH HOH . Y 12 HOH C 84 784 991 HOH HOH . Y 12 HOH C 85 785 910 HOH HOH . Y 12 HOH C 86 786 775 HOH HOH . Y 12 HOH C 87 787 1016 HOH HOH . Y 12 HOH C 88 788 949 HOH HOH . Y 12 HOH C 89 789 809 HOH HOH . Y 12 HOH C 90 790 954 HOH HOH . Y 12 HOH C 91 791 953 HOH HOH . Y 12 HOH C 92 792 893 HOH HOH . Y 12 HOH C 93 793 955 HOH HOH . Y 12 HOH C 94 794 851 HOH HOH . Y 12 HOH C 95 795 1054 HOH HOH . Y 12 HOH C 96 796 885 HOH HOH . Y 12 HOH C 97 797 1002 HOH HOH . Y 12 HOH C 98 798 979 HOH HOH . Y 12 HOH C 99 799 1019 HOH HOH . Y 12 HOH C 100 800 787 HOH HOH . Y 12 HOH C 101 801 833 HOH HOH . Y 12 HOH C 102 802 776 HOH HOH . Y 12 HOH C 103 803 897 HOH HOH . Y 12 HOH C 104 804 903 HOH HOH . Y 12 HOH C 105 805 902 HOH HOH . Y 12 HOH C 106 806 923 HOH HOH . Y 12 HOH C 107 807 801 HOH HOH . Y 12 HOH C 108 808 877 HOH HOH . Y 12 HOH C 109 809 976 HOH HOH . Y 12 HOH C 110 810 1000 HOH HOH . Y 12 HOH C 111 811 1027 HOH HOH . Y 12 HOH C 112 812 977 HOH HOH . Y 12 HOH C 113 813 999 HOH HOH . Y 12 HOH C 114 814 998 HOH HOH . Y 12 HOH C 115 815 1065 HOH HOH . Y 12 HOH C 116 816 936 HOH HOH . Y 12 HOH C 117 817 1064 HOH HOH . Y 12 HOH C 118 818 1023 HOH HOH . Y 12 HOH C 119 819 943 HOH HOH . Y 12 HOH C 120 820 1053 HOH HOH . Y 12 HOH C 121 821 973 HOH HOH . Y 12 HOH C 122 822 1060 HOH HOH . Y 12 HOH C 123 823 1082 HOH HOH . Y 12 HOH C 124 824 1095 HOH HOH . Z 12 HOH D 1 601 1211 HOH HOH . Z 12 HOH D 2 602 1217 HOH HOH . Z 12 HOH D 3 603 1212 HOH HOH . Z 12 HOH D 4 604 1177 HOH HOH . Z 12 HOH D 5 605 1162 HOH HOH . Z 12 HOH D 6 606 1202 HOH HOH . Z 12 HOH D 7 607 1193 HOH HOH . Z 12 HOH D 8 608 1220 HOH HOH . Z 12 HOH D 9 609 1237 HOH HOH . Z 12 HOH D 10 610 1245 HOH HOH . Z 12 HOH D 11 611 1257 HOH HOH . Z 12 HOH D 12 612 1222 HOH HOH . Z 12 HOH D 13 613 1234 HOH HOH . Z 12 HOH D 14 614 1274 HOH HOH . Z 12 HOH D 15 615 1180 HOH HOH . Z 12 HOH D 16 616 1277 HOH HOH . Z 12 HOH D 17 617 1296 HOH HOH . AA 12 HOH E 1 301 379 HOH HOH . AA 12 HOH E 2 302 1391 HOH HOH . AA 12 HOH E 3 303 1376 HOH HOH . AA 12 HOH E 4 304 660 HOH HOH . AA 12 HOH E 5 305 1366 HOH HOH . AA 12 HOH E 6 306 577 HOH HOH . BA 12 HOH F 1 501 1473 HOH HOH . BA 12 HOH F 2 502 1506 HOH HOH . BA 12 HOH F 3 503 1537 HOH HOH . BA 12 HOH F 4 504 1458 HOH HOH . BA 12 HOH F 5 505 1544 HOH HOH . BA 12 HOH F 6 506 1513 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 8 18.803 49.779 15.861 1 43.45 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . J 8 18.216 50.73 14.842 1 45.67 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . J 8 19.329 50.539 17.057 1 49.79 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . J 8 19.949 49.008 15.253 1 44.18 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . J 8 17.717 48.717 16.375 1 43.42 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . J 8 16.27 49.164 16.913 1 39.23 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . J 8 15.179 48.901 15.902 1 48.74 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . J 8 16.284 50.608 17.357 1 44.45 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . J 8 16.135 48.165 18.172 1 50.42 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . J 8 15.036 47.271 18.303 1 48.47 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . J 8 14.512 47.365 19.725 1 46.49 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . J 8 14.077 48.706 19.936 1 46.67 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . J 8 13.304 46.477 19.924 1 50.89 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . J 8 13.295 46.005 21.273 1 48.13 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . J 8 12.122 47.392 19.709 1 52.14 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . J 8 11.028 46.991 20.539 1 49.89 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . J 8 12.661 48.758 20.102 1 51.23 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . J 8 12.113 49.833 19.241 1 54.77 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . J 8 12.339 50.006 17.923 1 52.53 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . J 8 11.683 51.101 17.458 1 53.63 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . J 8 11.026 51.653 18.497 1 54.99 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . J 8 10.144 52.826 18.717 1 54.57 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . J 8 9.845 53.593 17.778 1 55 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . J 8 9.678 53.04 19.957 1 56.65 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . J 8 9.982 52.229 20.988 1 54.28 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . J 8 9.468 52.5 22.207 1 53.21 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . J 8 10.782 51.142 20.862 1 52.89 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . J 8 11.318 50.811 19.667 1 55.64 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 28 #