data_5S8V # _model_server_result.job_id mQYl0FVckOUOtrm7gXqO3w _model_server_result.datetime_utc '2024-10-19 14:27:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5s8v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 5S8V # _exptl.entry_id 5S8V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 265.308 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(furan-2-carbonyl)-N-(propan-2-yl)piperazine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.11 _cell.angle_gamma 90 _cell.entry_id 5S8V _cell.length_a 81.715 _cell.length_b 27.316 _cell.length_c 56.07 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5S8V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H19 N3 O3' _chem_comp.formula_weight 265.308 _chem_comp.id Y1A _chem_comp.mon_nstd_flag . _chem_comp.name 4-(furan-2-carbonyl)-N-(propan-2-yl)piperazine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 Y1A sing 376 n n C2 C1 Y1A sing 377 n n C1 N Y1A sing 378 n n N C3 Y1A sing 379 n n O C3 Y1A doub 380 n n C3 N1 Y1A sing 381 n n N1 C4 Y1A sing 382 n n C4 C5 Y1A sing 383 n n C5 N2 Y1A sing 384 n n N2 C6 Y1A sing 385 n n C6 O1 Y1A doub 386 n n C7 C6 Y1A sing 387 n n C7 C8 Y1A doub 388 n y C8 C9 Y1A sing 389 n y C9 C10 Y1A doub 390 n y C10 O2 Y1A sing 391 n y O2 C7 Y1A sing 392 n y C11 N2 Y1A sing 393 n n C12 C11 Y1A sing 394 n n N1 C12 Y1A sing 395 n n C4 H9 Y1A sing 396 n n C4 H8 Y1A sing 397 n n C5 H11 Y1A sing 398 n n C5 H10 Y1A sing 399 n n C8 H12 Y1A sing 400 n n C10 H14 Y1A sing 401 n n N H7 Y1A sing 402 n n C H2 Y1A sing 403 n n C H1 Y1A sing 404 n n C H Y1A sing 405 n n C1 H3 Y1A sing 406 n n C11 H15 Y1A sing 407 n n C11 H16 Y1A sing 408 n n C12 H18 Y1A sing 409 n n C12 H17 Y1A sing 410 n n C2 H4 Y1A sing 411 n n C2 H5 Y1A sing 412 n n C2 H6 Y1A sing 413 n n C9 H13 Y1A sing 414 n n # _atom_sites.entry_id 5S8V _atom_sites.fract_transf_matrix[1][1] 0.012238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002181 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036609 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Y1A A 1 1501 1501 Y1A LIG . C 3 HOH A 1 1601 204 HOH HOH . C 3 HOH A 2 1602 128 HOH HOH . C 3 HOH A 3 1603 167 HOH HOH . C 3 HOH A 4 1604 195 HOH HOH . C 3 HOH A 5 1605 197 HOH HOH . C 3 HOH A 6 1606 142 HOH HOH . C 3 HOH A 7 1607 55 HOH HOH . C 3 HOH A 8 1608 183 HOH HOH . C 3 HOH A 9 1609 98 HOH HOH . C 3 HOH A 10 1610 100 HOH HOH . C 3 HOH A 11 1611 151 HOH HOH . C 3 HOH A 12 1612 7 HOH HOH . C 3 HOH A 13 1613 121 HOH HOH . C 3 HOH A 14 1614 174 HOH HOH . C 3 HOH A 15 1615 135 HOH HOH . C 3 HOH A 16 1616 89 HOH HOH . C 3 HOH A 17 1617 184 HOH HOH . C 3 HOH A 18 1618 85 HOH HOH . C 3 HOH A 19 1619 124 HOH HOH . C 3 HOH A 20 1620 65 HOH HOH . C 3 HOH A 21 1621 140 HOH HOH . C 3 HOH A 22 1622 187 HOH HOH . C 3 HOH A 23 1623 94 HOH HOH . C 3 HOH A 24 1624 17 HOH HOH . C 3 HOH A 25 1625 10 HOH HOH . C 3 HOH A 26 1626 74 HOH HOH . C 3 HOH A 27 1627 123 HOH HOH . C 3 HOH A 28 1628 70 HOH HOH . C 3 HOH A 29 1629 162 HOH HOH . C 3 HOH A 30 1630 101 HOH HOH . C 3 HOH A 31 1631 33 HOH HOH . C 3 HOH A 32 1632 41 HOH HOH . C 3 HOH A 33 1633 159 HOH HOH . C 3 HOH A 34 1634 25 HOH HOH . C 3 HOH A 35 1635 143 HOH HOH . C 3 HOH A 36 1636 171 HOH HOH . C 3 HOH A 37 1637 12 HOH HOH . C 3 HOH A 38 1638 75 HOH HOH . C 3 HOH A 39 1639 50 HOH HOH . C 3 HOH A 40 1640 83 HOH HOH . C 3 HOH A 41 1641 16 HOH HOH . C 3 HOH A 42 1642 20 HOH HOH . C 3 HOH A 43 1643 36 HOH HOH . C 3 HOH A 44 1644 92 HOH HOH . C 3 HOH A 45 1645 130 HOH HOH . C 3 HOH A 46 1646 141 HOH HOH . C 3 HOH A 47 1647 139 HOH HOH . C 3 HOH A 48 1648 3 HOH HOH . C 3 HOH A 49 1649 160 HOH HOH . C 3 HOH A 50 1650 39 HOH HOH . C 3 HOH A 51 1651 9 HOH HOH . C 3 HOH A 52 1652 31 HOH HOH . C 3 HOH A 53 1653 172 HOH HOH . C 3 HOH A 54 1654 152 HOH HOH . C 3 HOH A 55 1655 4 HOH HOH . C 3 HOH A 56 1656 182 HOH HOH . C 3 HOH A 57 1657 28 HOH HOH . C 3 HOH A 58 1658 1 HOH HOH . C 3 HOH A 59 1659 108 HOH HOH . C 3 HOH A 60 1660 163 HOH HOH . C 3 HOH A 61 1661 59 HOH HOH . C 3 HOH A 62 1662 77 HOH HOH . C 3 HOH A 63 1663 191 HOH HOH . C 3 HOH A 64 1664 84 HOH HOH . C 3 HOH A 65 1665 45 HOH HOH . C 3 HOH A 66 1666 158 HOH HOH . C 3 HOH A 67 1667 35 HOH HOH . C 3 HOH A 68 1668 14 HOH HOH . C 3 HOH A 69 1669 64 HOH HOH . C 3 HOH A 70 1670 54 HOH HOH . C 3 HOH A 71 1671 82 HOH HOH . C 3 HOH A 72 1672 52 HOH HOH . C 3 HOH A 73 1673 157 HOH HOH . C 3 HOH A 74 1674 76 HOH HOH . C 3 HOH A 75 1675 6 HOH HOH . C 3 HOH A 76 1676 63 HOH HOH . C 3 HOH A 77 1677 62 HOH HOH . C 3 HOH A 78 1678 154 HOH HOH . C 3 HOH A 79 1679 5 HOH HOH . C 3 HOH A 80 1680 23 HOH HOH . C 3 HOH A 81 1681 180 HOH HOH . C 3 HOH A 82 1682 29 HOH HOH . C 3 HOH A 83 1683 119 HOH HOH . C 3 HOH A 84 1684 60 HOH HOH . C 3 HOH A 85 1685 80 HOH HOH . C 3 HOH A 86 1686 105 HOH HOH . C 3 HOH A 87 1687 113 HOH HOH . C 3 HOH A 88 1688 48 HOH HOH . C 3 HOH A 89 1689 161 HOH HOH . C 3 HOH A 90 1690 176 HOH HOH . C 3 HOH A 91 1691 11 HOH HOH . C 3 HOH A 92 1692 19 HOH HOH . C 3 HOH A 93 1693 69 HOH HOH . C 3 HOH A 94 1694 27 HOH HOH . C 3 HOH A 95 1695 56 HOH HOH . C 3 HOH A 96 1696 86 HOH HOH . C 3 HOH A 97 1697 122 HOH HOH . C 3 HOH A 98 1698 71 HOH HOH . C 3 HOH A 99 1699 37 HOH HOH . C 3 HOH A 100 1700 144 HOH HOH . C 3 HOH A 101 1701 91 HOH HOH . C 3 HOH A 102 1702 178 HOH HOH . C 3 HOH A 103 1703 150 HOH HOH . C 3 HOH A 104 1704 106 HOH HOH . C 3 HOH A 105 1705 15 HOH HOH . C 3 HOH A 106 1706 42 HOH HOH . C 3 HOH A 107 1707 138 HOH HOH . C 3 HOH A 108 1708 116 HOH HOH . C 3 HOH A 109 1709 129 HOH HOH . C 3 HOH A 110 1710 40 HOH HOH . C 3 HOH A 111 1711 67 HOH HOH . C 3 HOH A 112 1712 44 HOH HOH . C 3 HOH A 113 1713 38 HOH HOH . C 3 HOH A 114 1714 118 HOH HOH . C 3 HOH A 115 1715 134 HOH HOH . C 3 HOH A 116 1716 120 HOH HOH . C 3 HOH A 117 1717 137 HOH HOH . C 3 HOH A 118 1718 81 HOH HOH . C 3 HOH A 119 1719 88 HOH HOH . C 3 HOH A 120 1720 96 HOH HOH . C 3 HOH A 121 1721 145 HOH HOH . C 3 HOH A 122 1722 2 HOH HOH . C 3 HOH A 123 1723 22 HOH HOH . C 3 HOH A 124 1724 131 HOH HOH . C 3 HOH A 125 1725 57 HOH HOH . C 3 HOH A 126 1726 49 HOH HOH . C 3 HOH A 127 1727 72 HOH HOH . C 3 HOH A 128 1728 53 HOH HOH . C 3 HOH A 129 1729 125 HOH HOH . C 3 HOH A 130 1730 34 HOH HOH . C 3 HOH A 131 1731 117 HOH HOH . C 3 HOH A 132 1732 90 HOH HOH . C 3 HOH A 133 1733 109 HOH HOH . C 3 HOH A 134 1734 95 HOH HOH . C 3 HOH A 135 1735 177 HOH HOH . C 3 HOH A 136 1736 126 HOH HOH . C 3 HOH A 137 1737 165 HOH HOH . C 3 HOH A 138 1738 13 HOH HOH . C 3 HOH A 139 1739 181 HOH HOH . C 3 HOH A 140 1740 127 HOH HOH . C 3 HOH A 141 1741 179 HOH HOH . C 3 HOH A 142 1742 186 HOH HOH . C 3 HOH A 143 1743 146 HOH HOH . C 3 HOH A 144 1744 93 HOH HOH . C 3 HOH A 145 1745 136 HOH HOH . C 3 HOH A 146 1746 153 HOH HOH . C 3 HOH A 147 1747 26 HOH HOH . C 3 HOH A 148 1748 132 HOH HOH . C 3 HOH A 149 1749 133 HOH HOH . C 3 HOH A 150 1750 173 HOH HOH . C 3 HOH A 151 1751 166 HOH HOH . C 3 HOH A 152 1752 175 HOH HOH . C 3 HOH A 153 1753 164 HOH HOH . C 3 HOH A 154 1754 149 HOH HOH . C 3 HOH A 155 1755 194 HOH HOH . C 3 HOH A 156 1756 185 HOH HOH . C 3 HOH A 157 1757 202 HOH HOH . C 3 HOH A 158 1758 8 HOH HOH . C 3 HOH A 159 1759 114 HOH HOH . C 3 HOH A 160 1760 30 HOH HOH . C 3 HOH A 161 1761 156 HOH HOH . C 3 HOH A 162 1762 115 HOH HOH . C 3 HOH A 163 1763 107 HOH HOH . C 3 HOH A 164 1764 61 HOH HOH . C 3 HOH A 165 1765 104 HOH HOH . C 3 HOH A 166 1766 199 HOH HOH . C 3 HOH A 167 1767 198 HOH HOH . C 3 HOH A 168 1768 51 HOH HOH . C 3 HOH A 169 1769 190 HOH HOH . C 3 HOH A 170 1770 112 HOH HOH . C 3 HOH A 171 1771 170 HOH HOH . C 3 HOH A 172 1772 193 HOH HOH . C 3 HOH A 173 1773 110 HOH HOH . C 3 HOH A 174 1774 78 HOH HOH . C 3 HOH A 175 1775 188 HOH HOH . C 3 HOH A 176 1776 168 HOH HOH . C 3 HOH A 177 1777 68 HOH HOH . C 3 HOH A 178 1778 103 HOH HOH . C 3 HOH A 179 1779 102 HOH HOH . C 3 HOH A 180 1780 46 HOH HOH . C 3 HOH A 181 1781 148 HOH HOH . C 3 HOH A 182 1782 73 HOH HOH . C 3 HOH A 183 1783 99 HOH HOH . C 3 HOH A 184 1784 201 HOH HOH . C 3 HOH A 185 1785 196 HOH HOH . C 3 HOH A 186 1786 200 HOH HOH . C 3 HOH A 187 1787 111 HOH HOH . C 3 HOH A 188 1788 189 HOH HOH . C 3 HOH A 189 1789 97 HOH HOH . C 3 HOH A 190 1790 192 HOH HOH . C 3 HOH A 191 1791 87 HOH HOH . C 3 HOH A 192 1792 203 HOH HOH . C 3 HOH A 193 1793 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 Y1A . . . B 2 -17.99 15.774 26.536 0.38 16.77 ? N1 Y1A 1501 A 1 HETATM 2 C C4 Y1A . . . B 2 -18.656 14.879 27.56 0.38 16 ? C4 Y1A 1501 A 1 HETATM 3 C C5 Y1A . . . B 2 -18.801 13.405 27.147 0.38 15.62 ? C5 Y1A 1501 A 1 HETATM 4 C C6 Y1A . . . B 2 -20.303 12.656 25.301 0.38 14.66 ? C6 Y1A 1501 A 1 HETATM 5 C C7 Y1A . . . B 2 -21.541 12.518 26.058 0.38 13.73 ? C7 Y1A 1501 A 1 HETATM 6 C C8 Y1A . . . B 2 -22.662 11.801 25.739 0.38 13.54 ? C8 Y1A 1501 A 1 HETATM 7 C C10 Y1A . . . B 2 -23.033 12.946 27.605 0.38 13.71 ? C10 Y1A 1501 A 1 HETATM 8 N N Y1A . . . B 2 -16.158 17.331 26.12 0.38 18.3 ? N Y1A 1501 A 1 HETATM 9 C C Y1A . . . B 2 -14.611 19.043 25.294 0.38 18.93 ? C Y1A 1501 A 1 HETATM 10 O O Y1A . . . B 2 -16.886 16.973 28.248 0.38 18.06 ? O Y1A 1501 A 1 HETATM 11 C C1 Y1A . . . B 2 -15.656 18.697 26.37 0.38 18.69 ? C1 Y1A 1501 A 1 HETATM 12 C C11 Y1A . . . B 2 -18.18 13.812 24.865 0.38 15.68 ? C11 Y1A 1501 A 1 HETATM 13 C C12 Y1A . . . B 2 -17.829 15.267 25.134 0.38 15.86 ? C12 Y1A 1501 A 1 HETATM 14 C C2 Y1A . . . B 2 -16.821 19.709 26.371 0.38 19.01 ? C2 Y1A 1501 A 1 HETATM 15 C C3 Y1A . . . B 2 -16.982 16.728 27.06 0.38 17.54 ? C3 Y1A 1501 A 1 HETATM 16 C C9 Y1A . . . B 2 -23.622 12.097 26.74 0.38 12.82 ? C9 Y1A 1501 A 1 HETATM 17 N N2 Y1A . . . B 2 -19.277 13.454 25.752 0.38 15.09 ? N2 Y1A 1501 A 1 HETATM 18 O O1 Y1A . . . B 2 -20.208 12.123 24.224 0.38 13.74 ? O1 Y1A 1501 A 1 HETATM 19 O O2 Y1A . . . B 2 -21.732 13.233 27.215 0.38 13.59 ? O2 Y1A 1501 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #