data_5SB0 # _model_server_result.job_id 7Y4XRCPN321BgyMDjiDdvg _model_server_result.datetime_utc '2025-01-05 02:59:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sb0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5SB0 # _exptl.entry_id 5SB0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SB0 _cell.length_a 62.056 _cell.length_b 76.661 _cell.length_c 77.783 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SB0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 99 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 691 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 106 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 698 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.041 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SB0 _atom_sites.fract_transf_matrix[1][1] 0.016114 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012856 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 1001 1 IOD IOD . C 3 1IZ A 1 1002 1 1IZ L0R . D 4 CL A 1 1003 1 CL CL . E 5 HOH A 1 1101 31 HOH HOH . E 5 HOH A 2 1102 69 HOH HOH . E 5 HOH A 3 1103 34 HOH HOH . E 5 HOH A 4 1104 52 HOH HOH . E 5 HOH A 5 1105 33 HOH HOH . E 5 HOH A 6 1106 100 HOH HOH . E 5 HOH A 7 1107 18 HOH HOH . E 5 HOH A 8 1108 36 HOH HOH . E 5 HOH A 9 1109 44 HOH HOH . E 5 HOH A 10 1110 78 HOH HOH . E 5 HOH A 11 1111 94 HOH HOH . E 5 HOH A 12 1112 65 HOH HOH . E 5 HOH A 13 1113 118 HOH HOH . E 5 HOH A 14 1114 101 HOH HOH . E 5 HOH A 15 1115 25 HOH HOH . E 5 HOH A 16 1116 62 HOH HOH . E 5 HOH A 17 1117 48 HOH HOH . E 5 HOH A 18 1118 71 HOH HOH . E 5 HOH A 19 1119 14 HOH HOH . E 5 HOH A 20 1120 4 HOH HOH . E 5 HOH A 21 1121 16 HOH HOH . E 5 HOH A 22 1122 20 HOH HOH . E 5 HOH A 23 1123 5 HOH HOH . E 5 HOH A 24 1124 37 HOH HOH . E 5 HOH A 25 1125 64 HOH HOH . E 5 HOH A 26 1126 53 HOH HOH . E 5 HOH A 27 1127 27 HOH HOH . E 5 HOH A 28 1128 1 HOH HOH . E 5 HOH A 29 1129 50 HOH HOH . E 5 HOH A 30 1130 112 HOH HOH . E 5 HOH A 31 1131 32 HOH HOH . E 5 HOH A 32 1132 55 HOH HOH . E 5 HOH A 33 1133 28 HOH HOH . E 5 HOH A 34 1134 74 HOH HOH . E 5 HOH A 35 1135 13 HOH HOH . E 5 HOH A 36 1136 6 HOH HOH . E 5 HOH A 37 1137 114 HOH HOH . E 5 HOH A 38 1138 70 HOH HOH . E 5 HOH A 39 1139 35 HOH HOH . E 5 HOH A 40 1140 84 HOH HOH . E 5 HOH A 41 1141 92 HOH HOH . E 5 HOH A 42 1142 58 HOH HOH . E 5 HOH A 43 1143 95 HOH HOH . E 5 HOH A 44 1144 9 HOH HOH . E 5 HOH A 45 1145 108 HOH HOH . E 5 HOH A 46 1146 49 HOH HOH . E 5 HOH A 47 1147 117 HOH HOH . E 5 HOH A 48 1148 60 HOH HOH . E 5 HOH A 49 1149 105 HOH HOH . E 5 HOH A 50 1150 61 HOH HOH . E 5 HOH A 51 1151 115 HOH HOH . E 5 HOH A 52 1152 46 HOH HOH . E 5 HOH A 53 1153 98 HOH HOH . E 5 HOH A 54 1154 21 HOH HOH . E 5 HOH A 55 1155 63 HOH HOH . E 5 HOH A 56 1156 15 HOH HOH . E 5 HOH A 57 1157 57 HOH HOH . E 5 HOH A 58 1158 3 HOH HOH . E 5 HOH A 59 1159 43 HOH HOH . E 5 HOH A 60 1160 86 HOH HOH . E 5 HOH A 61 1161 113 HOH HOH . E 5 HOH A 62 1162 40 HOH HOH . E 5 HOH A 63 1163 90 HOH HOH . E 5 HOH A 64 1164 80 HOH HOH . E 5 HOH A 65 1165 88 HOH HOH . E 5 HOH A 66 1166 23 HOH HOH . E 5 HOH A 67 1167 51 HOH HOH . E 5 HOH A 68 1168 116 HOH HOH . E 5 HOH A 69 1169 72 HOH HOH . E 5 HOH A 70 1170 79 HOH HOH . E 5 HOH A 71 1171 89 HOH HOH . E 5 HOH A 72 1172 59 HOH HOH . E 5 HOH A 73 1173 7 HOH HOH . E 5 HOH A 74 1174 42 HOH HOH . E 5 HOH A 75 1175 10 HOH HOH . E 5 HOH A 76 1176 83 HOH HOH . E 5 HOH A 77 1177 2 HOH HOH . E 5 HOH A 78 1178 19 HOH HOH . E 5 HOH A 79 1179 103 HOH HOH . E 5 HOH A 80 1180 107 HOH HOH . E 5 HOH A 81 1181 11 HOH HOH . E 5 HOH A 82 1182 8 HOH HOH . E 5 HOH A 83 1183 22 HOH HOH . E 5 HOH A 84 1184 77 HOH HOH . E 5 HOH A 85 1185 24 HOH HOH . E 5 HOH A 86 1186 97 HOH HOH . E 5 HOH A 87 1187 29 HOH HOH . E 5 HOH A 88 1188 56 HOH HOH . E 5 HOH A 89 1189 12 HOH HOH . E 5 HOH A 90 1190 102 HOH HOH . E 5 HOH A 91 1191 87 HOH HOH . E 5 HOH A 92 1192 68 HOH HOH . E 5 HOH A 93 1193 96 HOH HOH . E 5 HOH A 94 1194 26 HOH HOH . E 5 HOH A 95 1195 109 HOH HOH . E 5 HOH A 96 1196 45 HOH HOH . E 5 HOH A 97 1197 17 HOH HOH . E 5 HOH A 98 1198 75 HOH HOH . E 5 HOH A 99 1199 82 HOH HOH . E 5 HOH A 100 1200 91 HOH HOH . E 5 HOH A 101 1201 66 HOH HOH . E 5 HOH A 102 1202 76 HOH HOH . E 5 HOH A 103 1203 67 HOH HOH . E 5 HOH A 104 1204 93 HOH HOH . E 5 HOH A 105 1205 111 HOH HOH . E 5 HOH A 106 1206 38 HOH HOH . E 5 HOH A 107 1207 41 HOH HOH . E 5 HOH A 108 1208 119 HOH HOH . E 5 HOH A 109 1209 73 HOH HOH . E 5 HOH A 110 1210 99 HOH HOH . E 5 HOH A 111 1211 106 HOH HOH . E 5 HOH A 112 1212 104 HOH HOH . E 5 HOH A 113 1213 110 HOH HOH . E 5 HOH A 114 1214 81 HOH HOH . E 5 HOH A 115 1215 39 HOH HOH . E 5 HOH A 116 1216 30 HOH HOH . E 5 HOH A 117 1217 54 HOH HOH . E 5 HOH A 118 1218 85 HOH HOH . E 5 HOH A 119 1219 47 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.365 _atom_site.Cartn_y -26.779 _atom_site.Cartn_z -1.79 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #