data_5SB9 # _model_server_result.job_id Vy8XgIbMPEyy-g6IcEntCg _model_server_result.datetime_utc '2024-11-16 23:28:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sb9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":501}' # _entry.id 5SB9 # _exptl.entry_id 5SB9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SB9 _cell.length_a 104.539 _cell.length_b 156.717 _cell.length_c 181.697 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 K N N ? 8 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc8 G O3G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc10 H MG MG . A MG 502 1_555 W O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc11 H MG MG . A MG 502 1_555 W O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc12 H MG MG . A MG 502 1_555 W O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc13 H MG MG . A MG 502 1_555 W O HOH . A HOH 626 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc14 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc15 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc16 L MG MG . B MG 502 1_555 X O HOH . B HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc17 L MG MG . B MG 502 1_555 X O HOH . B HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc18 L MG MG . B MG 502 1_555 X O HOH . B HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc19 L MG MG . B MG 502 1_555 Y O HOH . C HOH 663 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc20 C OD1 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc21 C OD2 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc22 C O THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc23 C OG1 THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc24 C O GLY 44 C GLY 44 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc25 C OE1 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc26 C OE2 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc27 N O1G GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc28 N O2B GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc29 O MG MG . C MG 502 1_555 Y O HOH . C HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc30 O MG MG . C MG 502 1_555 Y O HOH . C HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc31 O MG MG . C MG 502 1_555 Y O HOH . C HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc32 O MG MG . C MG 502 1_555 Y O HOH . C HOH 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? metalc ? metalc33 P CA CA . C CA 503 1_555 Y O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc34 D OE1 GLN 11 D GLN 11 1_555 S MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc35 R O1A GDP . D GDP 501 1_555 S MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc36 S MG MG . D MG 502 1_555 Z O HOH . D HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc37 S MG MG . D MG 502 1_555 Z O HOH . D HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc38 F OE2 GLU 331 F GLU 331 1_555 V MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 229 n n PB O2B GDP sing 230 n n PB O3B GDP sing 231 n n PB O3A GDP sing 232 n n O2B HOB2 GDP sing 233 n n O3B HOB3 GDP sing 234 n n O3A PA GDP sing 235 n n PA O1A GDP doub 236 n n PA O2A GDP sing 237 n n PA O5' GDP sing 238 n n O2A HOA2 GDP sing 239 n n O5' C5' GDP sing 240 n n C5' C4' GDP sing 241 n n C5' H5' GDP sing 242 n n C5' "H5''" GDP sing 243 n n C4' O4' GDP sing 244 n n C4' C3' GDP sing 245 n n C4' H4' GDP sing 246 n n O4' C1' GDP sing 247 n n C3' O3' GDP sing 248 n n C3' C2' GDP sing 249 n n C3' H3' GDP sing 250 n n O3' HO3' GDP sing 251 n n C2' O2' GDP sing 252 n n C2' C1' GDP sing 253 n n C2' H2' GDP sing 254 n n O2' HO2' GDP sing 255 n n C1' N9 GDP sing 256 n n C1' H1' GDP sing 257 n n N9 C8 GDP sing 258 n y N9 C4 GDP sing 259 n y C8 N7 GDP doub 260 n y C8 H8 GDP sing 261 n n N7 C5 GDP sing 262 n y C5 C6 GDP sing 263 n n C5 C4 GDP doub 264 n y C6 O6 GDP doub 265 n n C6 N1 GDP sing 266 n n N1 C2 GDP sing 267 n n N1 HN1 GDP sing 268 n n C2 N2 GDP sing 269 n n C2 N3 GDP doub 270 n n N2 HN21 GDP sing 271 n n N2 HN22 GDP sing 272 n n N3 C4 GDP sing 273 n n # _atom_sites.entry_id 5SB9 _atom_sites.fract_transf_matrix[1][1] 0.009566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006381 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 7 CA A 1 504 504 CA CA . K 8 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 9 MES B 1 503 601 MES MES . N 5 GTP C 1 501 501 GTP GTP . O 6 MG C 1 502 502 MG MG . P 7 CA C 1 503 503 CA CA . Q 10 IMD C 1 504 601 IMD IMD . R 8 GDP D 1 501 501 GDP GDP . S 6 MG D 1 502 502 MG MG . T 11 5IX D 1 503 603 5IX DRG . U 12 ACP F 1 501 501 ACP ACP . V 6 MG F 1 502 502 MG MG . W 13 HOH A 1 601 65 HOH HOH . W 13 HOH A 2 602 185 HOH HOH . W 13 HOH A 3 603 446 HOH HOH . W 13 HOH A 4 604 155 HOH HOH . W 13 HOH A 5 605 285 HOH HOH . W 13 HOH A 6 606 316 HOH HOH . W 13 HOH A 7 607 112 HOH HOH . W 13 HOH A 8 608 458 HOH HOH . W 13 HOH A 9 609 17 HOH HOH . W 13 HOH A 10 610 114 HOH HOH . W 13 HOH A 11 611 401 HOH HOH . W 13 HOH A 12 612 57 HOH HOH . W 13 HOH A 13 613 118 HOH HOH . W 13 HOH A 14 614 397 HOH HOH . W 13 HOH A 15 615 345 HOH HOH . W 13 HOH A 16 616 411 HOH HOH . W 13 HOH A 17 617 453 HOH HOH . W 13 HOH A 18 618 111 HOH HOH . W 13 HOH A 19 619 441 HOH HOH . W 13 HOH A 20 620 454 HOH HOH . W 13 HOH A 21 621 247 HOH HOH . W 13 HOH A 22 622 327 HOH HOH . W 13 HOH A 23 623 444 HOH HOH . W 13 HOH A 24 624 299 HOH HOH . W 13 HOH A 25 625 400 HOH HOH . W 13 HOH A 26 626 110 HOH HOH . W 13 HOH A 27 627 217 HOH HOH . W 13 HOH A 28 628 451 HOH HOH . W 13 HOH A 29 629 69 HOH HOH . W 13 HOH A 30 630 399 HOH HOH . W 13 HOH A 31 631 113 HOH HOH . W 13 HOH A 32 632 402 HOH HOH . W 13 HOH A 33 633 119 HOH HOH . W 13 HOH A 34 634 166 HOH HOH . W 13 HOH A 35 635 445 HOH HOH . W 13 HOH A 36 636 78 HOH HOH . W 13 HOH A 37 637 270 HOH HOH . W 13 HOH A 38 638 286 HOH HOH . W 13 HOH A 39 639 296 HOH HOH . W 13 HOH A 40 640 447 HOH HOH . W 13 HOH A 41 641 459 HOH HOH . W 13 HOH A 42 642 74 HOH HOH . W 13 HOH A 43 643 375 HOH HOH . W 13 HOH A 44 644 452 HOH HOH . W 13 HOH A 45 645 448 HOH HOH . W 13 HOH A 46 646 460 HOH HOH . W 13 HOH A 47 647 450 HOH HOH . W 13 HOH A 48 648 211 HOH HOH . W 13 HOH A 49 649 240 HOH HOH . W 13 HOH A 50 650 206 HOH HOH . X 13 HOH B 1 601 212 HOH HOH . X 13 HOH B 2 602 175 HOH HOH . X 13 HOH B 3 603 25 HOH HOH . X 13 HOH B 4 604 10 HOH HOH . X 13 HOH B 5 605 134 HOH HOH . X 13 HOH B 6 606 332 HOH HOH . X 13 HOH B 7 607 269 HOH HOH . X 13 HOH B 8 608 328 HOH HOH . X 13 HOH B 9 609 61 HOH HOH . X 13 HOH B 10 610 14 HOH HOH . X 13 HOH B 11 611 138 HOH HOH . X 13 HOH B 12 612 461 HOH HOH . X 13 HOH B 13 613 356 HOH HOH . X 13 HOH B 14 614 135 HOH HOH . X 13 HOH B 15 615 395 HOH HOH . X 13 HOH B 16 616 219 HOH HOH . X 13 HOH B 17 617 136 HOH HOH . X 13 HOH B 18 618 104 HOH HOH . X 13 HOH B 19 619 21 HOH HOH . X 13 HOH B 20 620 77 HOH HOH . X 13 HOH B 21 621 398 HOH HOH . X 13 HOH B 22 622 137 HOH HOH . X 13 HOH B 23 623 294 HOH HOH . X 13 HOH B 24 624 169 HOH HOH . X 13 HOH B 25 625 430 HOH HOH . X 13 HOH B 26 626 128 HOH HOH . X 13 HOH B 27 627 440 HOH HOH . X 13 HOH B 28 628 233 HOH HOH . X 13 HOH B 29 629 157 HOH HOH . X 13 HOH B 30 630 393 HOH HOH . X 13 HOH B 31 631 66 HOH HOH . X 13 HOH B 32 632 295 HOH HOH . X 13 HOH B 33 633 105 HOH HOH . X 13 HOH B 34 634 290 HOH HOH . X 13 HOH B 35 635 126 HOH HOH . X 13 HOH B 36 636 205 HOH HOH . X 13 HOH B 37 637 326 HOH HOH . X 13 HOH B 38 638 357 HOH HOH . X 13 HOH B 39 639 442 HOH HOH . X 13 HOH B 40 640 403 HOH HOH . X 13 HOH B 41 641 429 HOH HOH . X 13 HOH B 42 642 153 HOH HOH . X 13 HOH B 43 643 431 HOH HOH . X 13 HOH B 44 644 331 HOH HOH . X 13 HOH B 45 645 277 HOH HOH . X 13 HOH B 46 646 449 HOH HOH . X 13 HOH B 47 647 439 HOH HOH . X 13 HOH B 48 648 425 HOH HOH . X 13 HOH B 49 649 228 HOH HOH . X 13 HOH B 50 650 160 HOH HOH . X 13 HOH B 51 651 339 HOH HOH . X 13 HOH B 52 652 426 HOH HOH . X 13 HOH B 53 653 246 HOH HOH . X 13 HOH B 54 654 189 HOH HOH . X 13 HOH B 55 655 336 HOH HOH . X 13 HOH B 56 656 438 HOH HOH . X 13 HOH B 57 657 437 HOH HOH . X 13 HOH B 58 658 222 HOH HOH . X 13 HOH B 59 659 127 HOH HOH . X 13 HOH B 60 660 236 HOH HOH . X 13 HOH B 61 661 151 HOH HOH . X 13 HOH B 62 662 40 HOH HOH . Y 13 HOH C 1 601 33 HOH HOH . Y 13 HOH C 2 602 75 HOH HOH . Y 13 HOH C 3 603 3 HOH HOH . Y 13 HOH C 4 604 261 HOH HOH . Y 13 HOH C 5 605 34 HOH HOH . Y 13 HOH C 6 606 408 HOH HOH . Y 13 HOH C 7 607 98 HOH HOH . Y 13 HOH C 8 608 62 HOH HOH . Y 13 HOH C 9 609 44 HOH HOH . Y 13 HOH C 10 610 12 HOH HOH . Y 13 HOH C 11 611 268 HOH HOH . Y 13 HOH C 12 612 271 HOH HOH . Y 13 HOH C 13 613 162 HOH HOH . Y 13 HOH C 14 614 42 HOH HOH . Y 13 HOH C 15 615 384 HOH HOH . Y 13 HOH C 16 616 249 HOH HOH . Y 13 HOH C 17 617 1 HOH HOH . Y 13 HOH C 18 618 309 HOH HOH . Y 13 HOH C 19 619 146 HOH HOH . Y 13 HOH C 20 620 39 HOH HOH . Y 13 HOH C 21 621 4 HOH HOH . Y 13 HOH C 22 622 226 HOH HOH . Y 13 HOH C 23 623 143 HOH HOH . Y 13 HOH C 24 624 376 HOH HOH . Y 13 HOH C 25 625 280 HOH HOH . Y 13 HOH C 26 626 101 HOH HOH . Y 13 HOH C 27 627 434 HOH HOH . Y 13 HOH C 28 628 353 HOH HOH . Y 13 HOH C 29 629 199 HOH HOH . Y 13 HOH C 30 630 433 HOH HOH . Y 13 HOH C 31 631 188 HOH HOH . Y 13 HOH C 32 632 45 HOH HOH . Y 13 HOH C 33 633 435 HOH HOH . Y 13 HOH C 34 634 95 HOH HOH . Y 13 HOH C 35 635 58 HOH HOH . Y 13 HOH C 36 636 198 HOH HOH . Y 13 HOH C 37 637 32 HOH HOH . Y 13 HOH C 38 638 416 HOH HOH . Y 13 HOH C 39 639 130 HOH HOH . Y 13 HOH C 40 640 174 HOH HOH . Y 13 HOH C 41 641 243 HOH HOH . Y 13 HOH C 42 642 183 HOH HOH . Y 13 HOH C 43 643 63 HOH HOH . Y 13 HOH C 44 644 26 HOH HOH . Y 13 HOH C 45 645 56 HOH HOH . Y 13 HOH C 46 646 99 HOH HOH . Y 13 HOH C 47 647 122 HOH HOH . Y 13 HOH C 48 648 82 HOH HOH . Y 13 HOH C 49 649 388 HOH HOH . Y 13 HOH C 50 650 87 HOH HOH . Y 13 HOH C 51 651 224 HOH HOH . Y 13 HOH C 52 652 97 HOH HOH . Y 13 HOH C 53 653 94 HOH HOH . Y 13 HOH C 54 654 93 HOH HOH . Y 13 HOH C 55 655 436 HOH HOH . Y 13 HOH C 56 656 181 HOH HOH . Y 13 HOH C 57 657 121 HOH HOH . Y 13 HOH C 58 658 419 HOH HOH . Y 13 HOH C 59 659 367 HOH HOH . Y 13 HOH C 60 660 6 HOH HOH . Y 13 HOH C 61 661 432 HOH HOH . Y 13 HOH C 62 662 329 HOH HOH . Y 13 HOH C 63 663 103 HOH HOH . Y 13 HOH C 64 664 23 HOH HOH . Y 13 HOH C 65 665 292 HOH HOH . Y 13 HOH C 66 666 43 HOH HOH . Y 13 HOH C 67 667 322 HOH HOH . Y 13 HOH C 68 668 129 HOH HOH . Y 13 HOH C 69 669 359 HOH HOH . Y 13 HOH C 70 670 47 HOH HOH . Y 13 HOH C 71 671 289 HOH HOH . Y 13 HOH C 72 672 406 HOH HOH . Y 13 HOH C 73 673 29 HOH HOH . Y 13 HOH C 74 674 80 HOH HOH . Y 13 HOH C 75 675 92 HOH HOH . Y 13 HOH C 76 676 242 HOH HOH . Y 13 HOH C 77 677 300 HOH HOH . Y 13 HOH C 78 678 323 HOH HOH . Y 13 HOH C 79 679 2 HOH HOH . Y 13 HOH C 80 680 360 HOH HOH . Y 13 HOH C 81 681 392 HOH HOH . Y 13 HOH C 82 682 389 HOH HOH . Y 13 HOH C 83 683 244 HOH HOH . Y 13 HOH C 84 684 318 HOH HOH . Y 13 HOH C 85 685 325 HOH HOH . Y 13 HOH C 86 686 427 HOH HOH . Y 13 HOH C 87 687 203 HOH HOH . Y 13 HOH C 88 688 319 HOH HOH . Y 13 HOH C 89 689 64 HOH HOH . Y 13 HOH C 90 690 30 HOH HOH . Y 13 HOH C 91 691 421 HOH HOH . Y 13 HOH C 92 692 346 HOH HOH . Y 13 HOH C 93 693 302 HOH HOH . Y 13 HOH C 94 694 307 HOH HOH . Y 13 HOH C 95 695 423 HOH HOH . Y 13 HOH C 96 696 420 HOH HOH . Y 13 HOH C 97 697 234 HOH HOH . Y 13 HOH C 98 698 428 HOH HOH . Y 13 HOH C 99 699 422 HOH HOH . Y 13 HOH C 100 700 46 HOH HOH . Y 13 HOH C 101 701 70 HOH HOH . Y 13 HOH C 102 702 123 HOH HOH . Y 13 HOH C 103 703 407 HOH HOH . Y 13 HOH C 104 704 424 HOH HOH . Y 13 HOH C 105 705 41 HOH HOH . Y 13 HOH C 106 706 263 HOH HOH . Y 13 HOH C 107 707 314 HOH HOH . Y 13 HOH C 108 708 390 HOH HOH . Y 13 HOH C 109 709 385 HOH HOH . Y 13 HOH C 110 710 24 HOH HOH . Y 13 HOH C 111 711 391 HOH HOH . Y 13 HOH C 112 712 124 HOH HOH . Y 13 HOH C 113 713 220 HOH HOH . Z 13 HOH D 1 601 167 HOH HOH . Z 13 HOH D 2 602 418 HOH HOH . Z 13 HOH D 3 603 209 HOH HOH . Z 13 HOH D 4 604 83 HOH HOH . Z 13 HOH D 5 605 284 HOH HOH . Z 13 HOH D 6 606 382 HOH HOH . Z 13 HOH D 7 607 381 HOH HOH . Z 13 HOH D 8 608 414 HOH HOH . Z 13 HOH D 9 609 308 HOH HOH . Z 13 HOH D 10 610 365 HOH HOH . Z 13 HOH D 11 611 378 HOH HOH . Z 13 HOH D 12 612 231 HOH HOH . Z 13 HOH D 13 613 386 HOH HOH . Z 13 HOH D 14 614 364 HOH HOH . Z 13 HOH D 15 615 159 HOH HOH . Z 13 HOH D 16 616 293 HOH HOH . Z 13 HOH D 17 617 415 HOH HOH . Z 13 HOH D 18 618 412 HOH HOH . Z 13 HOH D 19 619 387 HOH HOH . Z 13 HOH D 20 620 413 HOH HOH . Z 13 HOH D 21 621 462 HOH HOH . Z 13 HOH D 22 622 305 HOH HOH . Z 13 HOH D 23 623 334 HOH HOH . Z 13 HOH D 24 624 377 HOH HOH . Z 13 HOH D 25 625 350 HOH HOH . Z 13 HOH D 26 626 383 HOH HOH . Z 13 HOH D 27 627 362 HOH HOH . Z 13 HOH D 28 628 232 HOH HOH . Z 13 HOH D 29 629 368 HOH HOH . Z 13 HOH D 30 630 351 HOH HOH . Z 13 HOH D 31 631 379 HOH HOH . Z 13 HOH D 32 632 371 HOH HOH . AA 13 HOH E 1 201 86 HOH HOH . AA 13 HOH E 2 202 50 HOH HOH . AA 13 HOH E 3 203 330 HOH HOH . AA 13 HOH E 4 204 194 HOH HOH . AA 13 HOH E 5 205 265 HOH HOH . AA 13 HOH E 6 206 90 HOH HOH . AA 13 HOH E 7 207 229 HOH HOH . AA 13 HOH E 8 208 340 HOH HOH . AA 13 HOH E 9 209 409 HOH HOH . AA 13 HOH E 10 210 394 HOH HOH . AA 13 HOH E 11 211 417 HOH HOH . BA 13 HOH F 1 601 9 HOH HOH . BA 13 HOH F 2 602 443 HOH HOH . BA 13 HOH F 3 603 380 HOH HOH . BA 13 HOH F 4 604 215 HOH HOH . BA 13 HOH F 5 605 410 HOH HOH . BA 13 HOH F 6 606 404 HOH HOH . BA 13 HOH F 7 607 274 HOH HOH . BA 13 HOH F 8 608 457 HOH HOH . BA 13 HOH F 9 609 238 HOH HOH . BA 13 HOH F 10 610 456 HOH HOH . BA 13 HOH F 11 611 405 HOH HOH . BA 13 HOH F 12 612 455 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . R 8 25.252 -10.322 -43.277 1 64.11 ? PB GDP 501 D 1 HETATM 2 O O1B GDP . . . R 8 25.179 -10.121 -44.771 1 76.87 ? O1B GDP 501 D 1 HETATM 3 O O2B GDP . . . R 8 24.775 -9.079 -42.566 1 80.9 ? O2B GDP 501 D 1 HETATM 4 O O3B GDP . . . R 8 26.686 -10.6 -42.893 1 69.07 ? O3B GDP 501 D 1 HETATM 5 O O3A GDP . . . R 8 24.352 -11.591 -42.859 1 68.52 ? O3A GDP 501 D 1 HETATM 6 P PA GDP . . . R 8 22.804 -11.44 -42.439 1 69.06 ? PA GDP 501 D 1 HETATM 7 O O1A GDP . . . R 8 21.896 -11.739 -43.606 1 68.7 ? O1A GDP 501 D 1 HETATM 8 O O2A GDP . . . R 8 22.513 -10.06 -41.898 1 77.24 ? O2A GDP 501 D 1 HETATM 9 O O5' GDP . . . R 8 22.626 -12.552 -41.288 1 70.52 ? O5' GDP 501 D 1 HETATM 10 C C5' GDP . . . R 8 21.591 -13.527 -41.382 1 73.93 ? C5' GDP 501 D 1 HETATM 11 C C4' GDP . . . R 8 20.643 -13.383 -40.202 1 58.47 ? C4' GDP 501 D 1 HETATM 12 O O4' GDP . . . R 8 19.998 -12.116 -40.319 1 55.4 ? O4' GDP 501 D 1 HETATM 13 C C3' GDP . . . R 8 19.56 -14.447 -40.233 1 66.12 ? C3' GDP 501 D 1 HETATM 14 O O3' GDP . . . R 8 19.455 -15.063 -38.946 1 64.69 ? O3' GDP 501 D 1 HETATM 15 C C2' GDP . . . R 8 18.273 -13.718 -40.556 1 60.62 ? C2' GDP 501 D 1 HETATM 16 O O2' GDP . . . R 8 17.207 -14.185 -39.727 1 75.61 ? O2' GDP 501 D 1 HETATM 17 C C1' GDP . . . R 8 18.579 -12.259 -40.272 1 60.76 ? C1' GDP 501 D 1 HETATM 18 N N9 GDP . . . R 8 17.956 -11.371 -41.284 1 66.92 ? N9 GDP 501 D 1 HETATM 19 C C8 GDP . . . R 8 18.388 -11.176 -42.543 1 67.86 ? C8 GDP 501 D 1 HETATM 20 N N7 GDP . . . R 8 17.592 -10.292 -43.199 1 72.43 ? N7 GDP 501 D 1 HETATM 21 C C5 GDP . . . R 8 16.629 -9.903 -42.343 1 66.02 ? C5 GDP 501 D 1 HETATM 22 C C6 GDP . . . R 8 15.465 -8.988 -42.383 1 66.36 ? C6 GDP 501 D 1 HETATM 23 O O6 GDP . . . R 8 15.185 -8.345 -43.417 1 67.75 ? O6 GDP 501 D 1 HETATM 24 N N1 GDP . . . R 8 14.72 -8.87 -41.276 1 76.3 ? N1 GDP 501 D 1 HETATM 25 C C2 GDP . . . R 8 14.994 -9.549 -40.146 1 69.56 ? C2 GDP 501 D 1 HETATM 26 N N2 GDP . . . R 8 14.19 -9.373 -39.071 1 66.15 ? N2 GDP 501 D 1 HETATM 27 N N3 GDP . . . R 8 16.043 -10.404 -40.037 1 65.84 ? N3 GDP 501 D 1 HETATM 28 C C4 GDP . . . R 8 16.876 -10.616 -41.082 1 71.85 ? C4 GDP 501 D 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #