data_5SBE # _model_server_result.job_id T8e7LRyEYAdWZkTDmeUjpg _model_server_result.datetime_utc '2024-11-17 01:50:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sbe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 5SBE # _exptl.entry_id 5SBE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SBE _cell.length_a 105.118 _cell.length_b 158.404 _cell.length_c 181.377 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SBE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc10 H MG MG . A MG 502 1_555 V O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc11 H MG MG . A MG 502 1_555 V O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc12 H MG MG . A MG 502 1_555 V O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc13 H MG MG . A MG 502 1_555 V O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc14 B OE1 GLN 11 B GLN 11 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc15 B OE1 GLU 111 B GLU 113 1_555 L CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc16 J O1A GDP . B GDP 501 1_555 K MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc17 K MG MG . B MG 502 1_555 W O HOH . B HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc18 K MG MG . B MG 502 1_555 W O HOH . B HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc19 K MG MG . B MG 502 1_555 W O HOH . B HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc20 K MG MG . B MG 502 1_555 X O HOH . C HOH 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc21 C OD1 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc22 C OD2 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc23 C O THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc24 C OG1 THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc25 C O GLY 44 C GLY 44 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc26 C OE1 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc27 C OE2 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc28 N O1G GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc29 N O1B GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc30 O MG MG . C MG 502 1_555 X O HOH . C HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc31 O MG MG . C MG 502 1_555 X O HOH . C HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc32 O MG MG . C MG 502 1_555 X O HOH . C HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc33 O MG MG . C MG 502 1_555 X O HOH . C HOH 650 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc34 P CA CA . C CA 503 1_555 X O HOH . C HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc35 D OE1 GLN 11 D GLN 11 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc36 Q O1A GDP . D GDP 501 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc37 R MG MG . D MG 502 1_555 Y O HOH . D HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc38 R MG MG . D MG 502 1_555 Y O HOH . D HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? metalc ? metalc39 R MG MG . D MG 502 1_555 Y O HOH . D HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc40 R MG MG . D MG 502 1_555 Y O HOH . D HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc41 F OE2 GLU 331 F GLU 331 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc42 T O1G ACP . F ACP 401 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? metalc ? metalc43 T O1B ACP . F ACP 401 1_555 U MG MG . F MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 226 n n PB O2B GDP sing 227 n n PB O3B GDP sing 228 n n PB O3A GDP sing 229 n n O2B HOB2 GDP sing 230 n n O3B HOB3 GDP sing 231 n n O3A PA GDP sing 232 n n PA O1A GDP doub 233 n n PA O2A GDP sing 234 n n PA O5' GDP sing 235 n n O2A HOA2 GDP sing 236 n n O5' C5' GDP sing 237 n n C5' C4' GDP sing 238 n n C5' H5' GDP sing 239 n n C5' "H5''" GDP sing 240 n n C4' O4' GDP sing 241 n n C4' C3' GDP sing 242 n n C4' H4' GDP sing 243 n n O4' C1' GDP sing 244 n n C3' O3' GDP sing 245 n n C3' C2' GDP sing 246 n n C3' H3' GDP sing 247 n n O3' HO3' GDP sing 248 n n C2' O2' GDP sing 249 n n C2' C1' GDP sing 250 n n C2' H2' GDP sing 251 n n O2' HO2' GDP sing 252 n n C1' N9 GDP sing 253 n n C1' H1' GDP sing 254 n n N9 C8 GDP sing 255 n y N9 C4 GDP sing 256 n y C8 N7 GDP doub 257 n y C8 H8 GDP sing 258 n n N7 C5 GDP sing 259 n y C5 C6 GDP sing 260 n n C5 C4 GDP doub 261 n y C6 O6 GDP doub 262 n n C6 N1 GDP sing 263 n n N1 C2 GDP sing 264 n n N1 HN1 GDP sing 265 n n C2 N2 GDP sing 266 n n C2 N3 GDP doub 267 n n N2 HN21 GDP sing 268 n n N2 HN22 GDP sing 269 n n N3 C4 GDP sing 270 n n # _atom_sites.entry_id 5SBE _atom_sites.fract_transf_matrix[1][1] 0.009513 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006313 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005513 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 7 CA B 1 503 503 CA CA . M 9 MES B 1 504 504 MES MES . N 5 GTP C 1 501 501 GTP GTP . O 6 MG C 1 502 502 MG MG . P 7 CA C 1 503 503 CA CA . Q 8 GDP D 1 501 501 GDP GDP . R 6 MG D 1 502 502 MG MG . S 10 5L5 D 1 503 511 5L5 DRG . T 11 ACP F 1 401 401 ACP ACP . U 6 MG F 1 402 402 MG MG . V 12 HOH A 1 601 426 HOH HOH . V 12 HOH A 2 602 11 HOH HOH . V 12 HOH A 3 603 6 HOH HOH . V 12 HOH A 4 604 16 HOH HOH . V 12 HOH A 5 605 860 HOH HOH . V 12 HOH A 6 606 17 HOH HOH . V 12 HOH A 7 607 25 HOH HOH . V 12 HOH A 8 608 621 HOH HOH . V 12 HOH A 9 609 859 HOH HOH . V 12 HOH A 10 610 861 HOH HOH . V 12 HOH A 11 611 12 HOH HOH . V 12 HOH A 12 612 50 HOH HOH . V 12 HOH A 13 613 33 HOH HOH . V 12 HOH A 14 614 31 HOH HOH . V 12 HOH A 15 615 632 HOH HOH . V 12 HOH A 16 616 27 HOH HOH . V 12 HOH A 17 617 38 HOH HOH . V 12 HOH A 18 618 665 HOH HOH . V 12 HOH A 19 619 35 HOH HOH . V 12 HOH A 20 620 36 HOH HOH . V 12 HOH A 21 621 57 HOH HOH . V 12 HOH A 22 622 37 HOH HOH . V 12 HOH A 23 623 47 HOH HOH . V 12 HOH A 24 624 835 HOH HOH . V 12 HOH A 25 625 391 HOH HOH . V 12 HOH A 26 626 505 HOH HOH . V 12 HOH A 27 627 52 HOH HOH . V 12 HOH A 28 628 400 HOH HOH . V 12 HOH A 29 629 857 HOH HOH . V 12 HOH A 30 630 616 HOH HOH . V 12 HOH A 31 631 60 HOH HOH . V 12 HOH A 32 632 59 HOH HOH . V 12 HOH A 33 633 801 HOH HOH . V 12 HOH A 34 634 725 HOH HOH . V 12 HOH A 35 635 287 HOH HOH . V 12 HOH A 36 636 858 HOH HOH . V 12 HOH A 37 637 346 HOH HOH . V 12 HOH A 38 638 464 HOH HOH . V 12 HOH A 39 639 62 HOH HOH . V 12 HOH A 40 640 491 HOH HOH . V 12 HOH A 41 641 805 HOH HOH . V 12 HOH A 42 642 854 HOH HOH . V 12 HOH A 43 643 809 HOH HOH . V 12 HOH A 44 644 503 HOH HOH . V 12 HOH A 45 645 855 HOH HOH . V 12 HOH A 46 646 61 HOH HOH . V 12 HOH A 47 647 490 HOH HOH . V 12 HOH A 48 648 853 HOH HOH . W 12 HOH B 1 601 550 HOH HOH . W 12 HOH B 2 602 734 HOH HOH . W 12 HOH B 3 603 796 HOH HOH . W 12 HOH B 4 604 378 HOH HOH . W 12 HOH B 5 605 66 HOH HOH . W 12 HOH B 6 606 686 HOH HOH . W 12 HOH B 7 607 803 HOH HOH . W 12 HOH B 8 608 75 HOH HOH . W 12 HOH B 9 609 106 HOH HOH . W 12 HOH B 10 610 408 HOH HOH . W 12 HOH B 11 611 779 HOH HOH . W 12 HOH B 12 612 77 HOH HOH . W 12 HOH B 13 613 71 HOH HOH . W 12 HOH B 14 614 88 HOH HOH . W 12 HOH B 15 615 92 HOH HOH . W 12 HOH B 16 616 105 HOH HOH . W 12 HOH B 17 617 477 HOH HOH . W 12 HOH B 18 618 73 HOH HOH . W 12 HOH B 19 619 90 HOH HOH . W 12 HOH B 20 620 358 HOH HOH . W 12 HOH B 21 621 99 HOH HOH . W 12 HOH B 22 622 113 HOH HOH . W 12 HOH B 23 623 87 HOH HOH . W 12 HOH B 24 624 95 HOH HOH . W 12 HOH B 25 625 317 HOH HOH . W 12 HOH B 26 626 86 HOH HOH . W 12 HOH B 27 627 722 HOH HOH . W 12 HOH B 28 628 795 HOH HOH . W 12 HOH B 29 629 96 HOH HOH . W 12 HOH B 30 630 84 HOH HOH . W 12 HOH B 31 631 352 HOH HOH . W 12 HOH B 32 632 417 HOH HOH . W 12 HOH B 33 633 80 HOH HOH . W 12 HOH B 34 634 67 HOH HOH . W 12 HOH B 35 635 94 HOH HOH . W 12 HOH B 36 636 825 HOH HOH . W 12 HOH B 37 637 724 HOH HOH . W 12 HOH B 38 638 850 HOH HOH . W 12 HOH B 39 639 819 HOH HOH . W 12 HOH B 40 640 107 HOH HOH . W 12 HOH B 41 641 308 HOH HOH . W 12 HOH B 42 642 68 HOH HOH . W 12 HOH B 43 643 91 HOH HOH . W 12 HOH B 44 644 83 HOH HOH . W 12 HOH B 45 645 851 HOH HOH . W 12 HOH B 46 646 764 HOH HOH . W 12 HOH B 47 647 823 HOH HOH . W 12 HOH B 48 648 112 HOH HOH . W 12 HOH B 49 649 704 HOH HOH . W 12 HOH B 50 650 79 HOH HOH . W 12 HOH B 51 651 633 HOH HOH . W 12 HOH B 52 652 661 HOH HOH . W 12 HOH B 53 653 821 HOH HOH . W 12 HOH B 54 654 294 HOH HOH . W 12 HOH B 55 655 646 HOH HOH . W 12 HOH B 56 656 541 HOH HOH . W 12 HOH B 57 657 483 HOH HOH . W 12 HOH B 58 658 794 HOH HOH . W 12 HOH B 59 659 103 HOH HOH . W 12 HOH B 60 660 116 HOH HOH . W 12 HOH B 61 661 369 HOH HOH . W 12 HOH B 62 662 804 HOH HOH . W 12 HOH B 63 663 342 HOH HOH . W 12 HOH B 64 664 109 HOH HOH . W 12 HOH B 65 665 847 HOH HOH . W 12 HOH B 66 666 852 HOH HOH . W 12 HOH B 67 667 701 HOH HOH . W 12 HOH B 68 668 662 HOH HOH . W 12 HOH B 69 669 777 HOH HOH . W 12 HOH B 70 670 108 HOH HOH . W 12 HOH B 71 671 119 HOH HOH . W 12 HOH B 72 672 117 HOH HOH . W 12 HOH B 73 673 772 HOH HOH . W 12 HOH B 74 674 371 HOH HOH . W 12 HOH B 75 675 123 HOH HOH . W 12 HOH B 76 676 122 HOH HOH . X 12 HOH C 1 601 727 HOH HOH . X 12 HOH C 2 602 131 HOH HOH . X 12 HOH C 3 603 154 HOH HOH . X 12 HOH C 4 604 132 HOH HOH . X 12 HOH C 5 605 197 HOH HOH . X 12 HOH C 6 606 145 HOH HOH . X 12 HOH C 7 607 167 HOH HOH . X 12 HOH C 8 608 160 HOH HOH . X 12 HOH C 9 609 125 HOH HOH . X 12 HOH C 10 610 144 HOH HOH . X 12 HOH C 11 611 733 HOH HOH . X 12 HOH C 12 612 166 HOH HOH . X 12 HOH C 13 613 180 HOH HOH . X 12 HOH C 14 614 845 HOH HOH . X 12 HOH C 15 615 151 HOH HOH . X 12 HOH C 16 616 130 HOH HOH . X 12 HOH C 17 617 140 HOH HOH . X 12 HOH C 18 618 135 HOH HOH . X 12 HOH C 19 619 126 HOH HOH . X 12 HOH C 20 620 164 HOH HOH . X 12 HOH C 21 621 171 HOH HOH . X 12 HOH C 22 622 152 HOH HOH . X 12 HOH C 23 623 179 HOH HOH . X 12 HOH C 24 624 460 HOH HOH . X 12 HOH C 25 625 156 HOH HOH . X 12 HOH C 26 626 730 HOH HOH . X 12 HOH C 27 627 175 HOH HOH . X 12 HOH C 28 628 168 HOH HOH . X 12 HOH C 29 629 148 HOH HOH . X 12 HOH C 30 630 143 HOH HOH . X 12 HOH C 31 631 173 HOH HOH . X 12 HOH C 32 632 150 HOH HOH . X 12 HOH C 33 633 163 HOH HOH . X 12 HOH C 34 634 192 HOH HOH . X 12 HOH C 35 635 202 HOH HOH . X 12 HOH C 36 636 656 HOH HOH . X 12 HOH C 37 637 193 HOH HOH . X 12 HOH C 38 638 307 HOH HOH . X 12 HOH C 39 639 412 HOH HOH . X 12 HOH C 40 640 198 HOH HOH . X 12 HOH C 41 641 165 HOH HOH . X 12 HOH C 42 642 654 HOH HOH . X 12 HOH C 43 643 211 HOH HOH . X 12 HOH C 44 644 190 HOH HOH . X 12 HOH C 45 645 350 HOH HOH . X 12 HOH C 46 646 224 HOH HOH . X 12 HOH C 47 647 797 HOH HOH . X 12 HOH C 48 648 214 HOH HOH . X 12 HOH C 49 649 648 HOH HOH . X 12 HOH C 50 650 133 HOH HOH . X 12 HOH C 51 651 313 HOH HOH . X 12 HOH C 52 652 221 HOH HOH . X 12 HOH C 53 653 162 HOH HOH . X 12 HOH C 54 654 208 HOH HOH . X 12 HOH C 55 655 370 HOH HOH . X 12 HOH C 56 656 161 HOH HOH . X 12 HOH C 57 657 204 HOH HOH . X 12 HOH C 58 658 185 HOH HOH . X 12 HOH C 59 659 205 HOH HOH . X 12 HOH C 60 660 364 HOH HOH . X 12 HOH C 61 661 664 HOH HOH . X 12 HOH C 62 662 443 HOH HOH . X 12 HOH C 63 663 470 HOH HOH . X 12 HOH C 64 664 625 HOH HOH . X 12 HOH C 65 665 723 HOH HOH . X 12 HOH C 66 666 201 HOH HOH . X 12 HOH C 67 667 177 HOH HOH . X 12 HOH C 68 668 411 HOH HOH . X 12 HOH C 69 669 244 HOH HOH . X 12 HOH C 70 670 238 HOH HOH . X 12 HOH C 71 671 700 HOH HOH . X 12 HOH C 72 672 361 HOH HOH . X 12 HOH C 73 673 410 HOH HOH . X 12 HOH C 74 674 222 HOH HOH . X 12 HOH C 75 675 153 HOH HOH . X 12 HOH C 76 676 184 HOH HOH . X 12 HOH C 77 677 831 HOH HOH . X 12 HOH C 78 678 200 HOH HOH . X 12 HOH C 79 679 538 HOH HOH . X 12 HOH C 80 680 240 HOH HOH . X 12 HOH C 81 681 172 HOH HOH . X 12 HOH C 82 682 227 HOH HOH . X 12 HOH C 83 683 798 HOH HOH . X 12 HOH C 84 684 181 HOH HOH . X 12 HOH C 85 685 254 HOH HOH . X 12 HOH C 86 686 174 HOH HOH . X 12 HOH C 87 687 751 HOH HOH . X 12 HOH C 88 688 492 HOH HOH . X 12 HOH C 89 689 245 HOH HOH . X 12 HOH C 90 690 212 HOH HOH . X 12 HOH C 91 691 225 HOH HOH . X 12 HOH C 92 692 309 HOH HOH . X 12 HOH C 93 693 226 HOH HOH . X 12 HOH C 94 694 219 HOH HOH . X 12 HOH C 95 695 206 HOH HOH . X 12 HOH C 96 696 217 HOH HOH . X 12 HOH C 97 697 191 HOH HOH . X 12 HOH C 98 698 243 HOH HOH . X 12 HOH C 99 699 726 HOH HOH . X 12 HOH C 100 700 822 HOH HOH . X 12 HOH C 101 701 194 HOH HOH . X 12 HOH C 102 702 146 HOH HOH . X 12 HOH C 103 703 812 HOH HOH . X 12 HOH C 104 704 731 HOH HOH . X 12 HOH C 105 705 332 HOH HOH . X 12 HOH C 106 706 178 HOH HOH . X 12 HOH C 107 707 213 HOH HOH . X 12 HOH C 108 708 220 HOH HOH . X 12 HOH C 109 709 237 HOH HOH . X 12 HOH C 110 710 228 HOH HOH . X 12 HOH C 111 711 223 HOH HOH . X 12 HOH C 112 712 548 HOH HOH . X 12 HOH C 113 713 251 HOH HOH . X 12 HOH C 114 714 728 HOH HOH . X 12 HOH C 115 715 652 HOH HOH . X 12 HOH C 116 716 241 HOH HOH . X 12 HOH C 117 717 255 HOH HOH . X 12 HOH C 118 718 216 HOH HOH . X 12 HOH C 119 719 842 HOH HOH . X 12 HOH C 120 720 236 HOH HOH . X 12 HOH C 121 721 318 HOH HOH . X 12 HOH C 122 722 438 HOH HOH . X 12 HOH C 123 723 247 HOH HOH . X 12 HOH C 124 724 231 HOH HOH . X 12 HOH C 125 725 252 HOH HOH . X 12 HOH C 126 726 750 HOH HOH . X 12 HOH C 127 727 829 HOH HOH . X 12 HOH C 128 728 232 HOH HOH . X 12 HOH C 129 729 785 HOH HOH . X 12 HOH C 130 730 472 HOH HOH . X 12 HOH C 131 731 215 HOH HOH . X 12 HOH C 132 732 422 HOH HOH . X 12 HOH C 133 733 256 HOH HOH . X 12 HOH C 134 734 495 HOH HOH . X 12 HOH C 135 735 650 HOH HOH . X 12 HOH C 136 736 246 HOH HOH . X 12 HOH C 137 737 800 HOH HOH . X 12 HOH C 138 738 826 HOH HOH . X 12 HOH C 139 739 689 HOH HOH . X 12 HOH C 140 740 746 HOH HOH . X 12 HOH C 141 741 457 HOH HOH . X 12 HOH C 142 742 843 HOH HOH . X 12 HOH C 143 743 388 HOH HOH . X 12 HOH C 144 744 345 HOH HOH . X 12 HOH C 145 745 261 HOH HOH . X 12 HOH C 146 746 356 HOH HOH . X 12 HOH C 147 747 260 HOH HOH . X 12 HOH C 148 748 259 HOH HOH . X 12 HOH C 149 749 690 HOH HOH . X 12 HOH C 150 750 844 HOH HOH . X 12 HOH C 151 751 430 HOH HOH . X 12 HOH C 152 752 791 HOH HOH . X 12 HOH C 153 753 327 HOH HOH . Y 12 HOH D 1 601 694 HOH HOH . Y 12 HOH D 2 602 277 HOH HOH . Y 12 HOH D 3 603 272 HOH HOH . Y 12 HOH D 4 604 271 HOH HOH . Y 12 HOH D 5 605 321 HOH HOH . Y 12 HOH D 6 606 310 HOH HOH . Y 12 HOH D 7 607 147 HOH HOH . Y 12 HOH D 8 608 508 HOH HOH . Y 12 HOH D 9 609 283 HOH HOH . Y 12 HOH D 10 610 511 HOH HOH . Y 12 HOH D 11 611 691 HOH HOH . Y 12 HOH D 12 612 275 HOH HOH . Y 12 HOH D 13 613 862 HOH HOH . Y 12 HOH D 14 614 312 HOH HOH . Y 12 HOH D 15 615 376 HOH HOH . Y 12 HOH D 16 616 285 HOH HOH . Y 12 HOH D 17 617 280 HOH HOH . Y 12 HOH D 18 618 282 HOH HOH . Y 12 HOH D 19 619 273 HOH HOH . Y 12 HOH D 20 620 276 HOH HOH . Y 12 HOH D 21 621 434 HOH HOH . Y 12 HOH D 22 622 286 HOH HOH . Y 12 HOH D 23 623 534 HOH HOH . Y 12 HOH D 24 624 374 HOH HOH . Y 12 HOH D 25 625 839 HOH HOH . Y 12 HOH D 26 626 627 HOH HOH . Y 12 HOH D 27 627 585 HOH HOH . Y 12 HOH D 28 628 841 HOH HOH . Y 12 HOH D 29 629 604 HOH HOH . Y 12 HOH D 30 630 840 HOH HOH . Z 12 HOH E 1 201 353 HOH HOH . Z 12 HOH E 2 202 375 HOH HOH . Z 12 HOH E 3 203 403 HOH HOH . Z 12 HOH E 4 204 849 HOH HOH . Z 12 HOH E 5 205 543 HOH HOH . Z 12 HOH E 6 206 848 HOH HOH . Z 12 HOH E 7 207 684 HOH HOH . Z 12 HOH E 8 208 498 HOH HOH . Z 12 HOH E 9 209 58 HOH HOH . Z 12 HOH E 10 210 532 HOH HOH . Z 12 HOH E 11 211 195 HOH HOH . Z 12 HOH E 12 212 653 HOH HOH . Z 12 HOH E 13 213 601 HOH HOH . AA 12 HOH F 1 501 337 HOH HOH . AA 12 HOH F 2 502 295 HOH HOH . AA 12 HOH F 3 503 339 HOH HOH . AA 12 HOH F 4 504 856 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 8 18.691 49.827 15.954 1 44.79 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . J 8 19.204 48.77 15.009 1 41.47 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . J 8 19.857 50.437 16.682 1 44.79 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . J 8 17.94 50.879 15.175 1 48.43 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . J 8 17.74 49.171 17.07 1 56 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . J 8 16.134 49.187 16.978 1 48.43 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . J 8 15.637 48.56 15.699 1 55.27 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . J 8 15.623 50.599 17.11 1 41.74 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . J 8 15.752 48.309 18.269 1 34.16 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . J 8 14.632 47.432 18.285 1 40.18 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . J 8 14.122 47.354 19.716 1 42.66 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . J 8 13.787 48.68 20.114 1 47.14 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . J 8 12.859 46.523 19.818 1 48.28 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . J 8 12.874 45.777 21.04 1 50.22 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . J 8 11.727 47.523 19.857 1 44.44 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . J 8 10.742 47.115 20.809 1 51.91 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . J 8 12.377 48.828 20.285 1 47.45 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . J 8 11.917 49.954 19.44 1 42.99 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . J 8 12.222 50.141 18.144 1 41.86 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . J 8 11.649 51.275 17.667 1 47.84 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . J 8 10.966 51.838 18.68 1 45.25 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . J 8 10.135 53.048 18.866 1 48.21 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . J 8 9.933 53.84 17.921 1 43.52 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . J 8 9.607 53.267 20.076 1 51.94 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . J 8 9.807 52.43 21.112 1 43.12 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . J 8 9.237 52.72 22.306 1 48.25 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . J 8 10.556 51.305 21.012 1 42.14 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . J 8 11.148 50.964 19.845 1 42.72 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #