data_5SBW
#
_model_server_result.job_id            Hl6Si1OKRzwpcF2w8oChyg 
_model_server_result.datetime_utc      '2024-11-26 03:12:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5sbw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":209}' 
#
_entry.id    5SBW 
#
_exptl.entry_id    5SBW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.83 
_cell.angle_gamma         90 
_cell.entry_id            5SBW 
_cell.length_a            31.066 
_cell.length_b            82.133 
_cell.length_c            32.089 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5SBW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 10 A CYS 32 1_555 A SG CYS 112 A CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 35 A CYS 57 1_555 A SG CYS 101 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf3 A SG CYS 59 A CYS 81 1_555 A SG CYS 79 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     5SBW 
_atom_sites.fract_transf_matrix[1][1]    0.03219 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.016993 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012175 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.035239 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 O0M A 1 201 201 O0M LIG . 
C 3 DMS A 1 202 1 DMS DMS . 
D 3 DMS A 1 203 2 DMS DMS . 
E 3 DMS A 1 204 3 DMS DMS . 
F 3 DMS A 1 205 4 DMS DMS . 
G 4 EDO A 1 206 1 EDO EDO . 
H 4 EDO A 1 207 2 EDO EDO . 
I 4 EDO A 1 208 3 EDO EDO . 
J 4 EDO A 1 209 4 EDO EDO . 
K 5 HOH A 1 301 278 HOH HOH . 
K 5 HOH A 2 302 41 HOH HOH . 
K 5 HOH A 3 303 32 HOH HOH . 
K 5 HOH A 4 304 231 HOH HOH . 
K 5 HOH A 5 305 255 HOH HOH . 
K 5 HOH A 6 306 71 HOH HOH . 
K 5 HOH A 7 307 103 HOH HOH . 
K 5 HOH A 8 308 192 HOH HOH . 
K 5 HOH A 9 309 263 HOH HOH . 
K 5 HOH A 10 310 21 HOH HOH . 
K 5 HOH A 11 311 115 HOH HOH . 
K 5 HOH A 12 312 62 HOH HOH . 
K 5 HOH A 13 313 144 HOH HOH . 
K 5 HOH A 14 314 114 HOH HOH . 
K 5 HOH A 15 315 81 HOH HOH . 
K 5 HOH A 16 316 49 HOH HOH . 
K 5 HOH A 17 317 163 HOH HOH . 
K 5 HOH A 18 318 60 HOH HOH . 
K 5 HOH A 19 319 250 HOH HOH . 
K 5 HOH A 20 320 50 HOH HOH . 
K 5 HOH A 21 321 180 HOH HOH . 
K 5 HOH A 22 322 85 HOH HOH . 
K 5 HOH A 23 323 254 HOH HOH . 
K 5 HOH A 24 324 125 HOH HOH . 
K 5 HOH A 25 325 2 HOH HOH . 
K 5 HOH A 26 326 112 HOH HOH . 
K 5 HOH A 27 327 268 HOH HOH . 
K 5 HOH A 28 328 34 HOH HOH . 
K 5 HOH A 29 329 68 HOH HOH . 
K 5 HOH A 30 330 271 HOH HOH . 
K 5 HOH A 31 331 117 HOH HOH . 
K 5 HOH A 32 332 13 HOH HOH . 
K 5 HOH A 33 333 82 HOH HOH . 
K 5 HOH A 34 334 51 HOH HOH . 
K 5 HOH A 35 335 46 HOH HOH . 
K 5 HOH A 36 336 120 HOH HOH . 
K 5 HOH A 37 337 137 HOH HOH . 
K 5 HOH A 38 338 130 HOH HOH . 
K 5 HOH A 39 339 18 HOH HOH . 
K 5 HOH A 40 340 128 HOH HOH . 
K 5 HOH A 41 341 1 HOH HOH . 
K 5 HOH A 42 342 205 HOH HOH . 
K 5 HOH A 43 343 7 HOH HOH . 
K 5 HOH A 44 344 10 HOH HOH . 
K 5 HOH A 45 345 55 HOH HOH . 
K 5 HOH A 46 346 79 HOH HOH . 
K 5 HOH A 47 347 26 HOH HOH . 
K 5 HOH A 48 348 4 HOH HOH . 
K 5 HOH A 49 349 54 HOH HOH . 
K 5 HOH A 50 350 31 HOH HOH . 
K 5 HOH A 51 351 14 HOH HOH . 
K 5 HOH A 52 352 91 HOH HOH . 
K 5 HOH A 53 353 5 HOH HOH . 
K 5 HOH A 54 354 9 HOH HOH . 
K 5 HOH A 55 355 3 HOH HOH . 
K 5 HOH A 56 356 27 HOH HOH . 
K 5 HOH A 57 357 22 HOH HOH . 
K 5 HOH A 58 358 78 HOH HOH . 
K 5 HOH A 59 359 57 HOH HOH . 
K 5 HOH A 60 360 19 HOH HOH . 
K 5 HOH A 61 361 76 HOH HOH . 
K 5 HOH A 62 362 33 HOH HOH . 
K 5 HOH A 63 363 38 HOH HOH . 
K 5 HOH A 64 364 178 HOH HOH . 
K 5 HOH A 65 365 35 HOH HOH . 
K 5 HOH A 66 366 28 HOH HOH . 
K 5 HOH A 67 367 174 HOH HOH . 
K 5 HOH A 68 368 45 HOH HOH . 
K 5 HOH A 69 369 75 HOH HOH . 
K 5 HOH A 70 370 109 HOH HOH . 
K 5 HOH A 71 371 161 HOH HOH . 
K 5 HOH A 72 372 110 HOH HOH . 
K 5 HOH A 73 373 289 HOH HOH . 
K 5 HOH A 74 374 44 HOH HOH . 
K 5 HOH A 75 375 63 HOH HOH . 
K 5 HOH A 76 376 223 HOH HOH . 
K 5 HOH A 77 377 160 HOH HOH . 
K 5 HOH A 78 378 95 HOH HOH . 
K 5 HOH A 79 379 126 HOH HOH . 
K 5 HOH A 80 380 15 HOH HOH . 
K 5 HOH A 81 381 73 HOH HOH . 
K 5 HOH A 82 382 215 HOH HOH . 
K 5 HOH A 83 383 11 HOH HOH . 
K 5 HOH A 84 384 29 HOH HOH . 
K 5 HOH A 85 385 147 HOH HOH . 
K 5 HOH A 86 386 154 HOH HOH . 
K 5 HOH A 87 387 101 HOH HOH . 
K 5 HOH A 88 388 238 HOH HOH . 
K 5 HOH A 89 389 291 HOH HOH . 
K 5 HOH A 90 390 107 HOH HOH . 
K 5 HOH A 91 391 216 HOH HOH . 
K 5 HOH A 92 392 279 HOH HOH . 
K 5 HOH A 93 393 36 HOH HOH . 
K 5 HOH A 94 394 193 HOH HOH . 
K 5 HOH A 95 395 16 HOH HOH . 
K 5 HOH A 96 396 116 HOH HOH . 
K 5 HOH A 97 397 102 HOH HOH . 
K 5 HOH A 98 398 270 HOH HOH . 
K 5 HOH A 99 399 127 HOH HOH . 
K 5 HOH A 100 400 227 HOH HOH . 
K 5 HOH A 101 401 25 HOH HOH . 
K 5 HOH A 102 402 43 HOH HOH . 
K 5 HOH A 103 403 66 HOH HOH . 
K 5 HOH A 104 404 100 HOH HOH . 
K 5 HOH A 105 405 156 HOH HOH . 
K 5 HOH A 106 406 158 HOH HOH . 
K 5 HOH A 107 407 106 HOH HOH . 
K 5 HOH A 108 408 153 HOH HOH . 
K 5 HOH A 109 409 40 HOH HOH . 
K 5 HOH A 110 410 48 HOH HOH . 
K 5 HOH A 111 411 42 HOH HOH . 
K 5 HOH A 112 412 259 HOH HOH . 
K 5 HOH A 113 413 261 HOH HOH . 
K 5 HOH A 114 414 197 HOH HOH . 
K 5 HOH A 115 415 47 HOH HOH . 
K 5 HOH A 116 416 124 HOH HOH . 
K 5 HOH A 117 417 87 HOH HOH . 
K 5 HOH A 118 418 200 HOH HOH . 
K 5 HOH A 119 419 92 HOH HOH . 
K 5 HOH A 120 420 70 HOH HOH . 
K 5 HOH A 121 421 6 HOH HOH . 
K 5 HOH A 122 422 121 HOH HOH . 
K 5 HOH A 123 423 182 HOH HOH . 
K 5 HOH A 124 424 64 HOH HOH . 
K 5 HOH A 125 425 39 HOH HOH . 
K 5 HOH A 126 426 20 HOH HOH . 
K 5 HOH A 127 427 17 HOH HOH . 
K 5 HOH A 128 428 219 HOH HOH . 
K 5 HOH A 129 429 89 HOH HOH . 
K 5 HOH A 130 430 24 HOH HOH . 
K 5 HOH A 131 431 239 HOH HOH . 
K 5 HOH A 132 432 123 HOH HOH . 
K 5 HOH A 133 433 12 HOH HOH . 
K 5 HOH A 134 434 72 HOH HOH . 
K 5 HOH A 135 435 258 HOH HOH . 
K 5 HOH A 136 436 177 HOH HOH . 
K 5 HOH A 137 437 108 HOH HOH . 
K 5 HOH A 138 438 167 HOH HOH . 
K 5 HOH A 139 439 221 HOH HOH . 
K 5 HOH A 140 440 155 HOH HOH . 
K 5 HOH A 141 441 206 HOH HOH . 
K 5 HOH A 142 442 266 HOH HOH . 
K 5 HOH A 143 443 23 HOH HOH . 
K 5 HOH A 144 444 152 HOH HOH . 
K 5 HOH A 145 445 8 HOH HOH . 
K 5 HOH A 146 446 96 HOH HOH . 
K 5 HOH A 147 447 218 HOH HOH . 
K 5 HOH A 148 448 189 HOH HOH . 
K 5 HOH A 149 449 237 HOH HOH . 
K 5 HOH A 150 450 212 HOH HOH . 
K 5 HOH A 151 451 105 HOH HOH . 
K 5 HOH A 152 452 183 HOH HOH . 
K 5 HOH A 153 453 86 HOH HOH . 
K 5 HOH A 154 454 176 HOH HOH . 
K 5 HOH A 155 455 53 HOH HOH . 
K 5 HOH A 156 456 146 HOH HOH . 
K 5 HOH A 157 457 80 HOH HOH . 
K 5 HOH A 158 458 249 HOH HOH . 
K 5 HOH A 159 459 201 HOH HOH . 
K 5 HOH A 160 460 159 HOH HOH . 
K 5 HOH A 161 461 149 HOH HOH . 
K 5 HOH A 162 462 58 HOH HOH . 
K 5 HOH A 163 463 56 HOH HOH . 
K 5 HOH A 164 464 131 HOH HOH . 
K 5 HOH A 165 465 113 HOH HOH . 
K 5 HOH A 166 466 290 HOH HOH . 
K 5 HOH A 167 467 143 HOH HOH . 
K 5 HOH A 168 468 122 HOH HOH . 
K 5 HOH A 169 469 179 HOH HOH . 
K 5 HOH A 170 470 84 HOH HOH . 
K 5 HOH A 171 471 222 HOH HOH . 
K 5 HOH A 172 472 273 HOH HOH . 
K 5 HOH A 173 473 94 HOH HOH . 
K 5 HOH A 174 474 283 HOH HOH . 
K 5 HOH A 175 475 134 HOH HOH . 
K 5 HOH A 176 476 69 HOH HOH . 
K 5 HOH A 177 477 226 HOH HOH . 
K 5 HOH A 178 478 233 HOH HOH . 
K 5 HOH A 179 479 165 HOH HOH . 
K 5 HOH A 180 480 52 HOH HOH . 
K 5 HOH A 181 481 140 HOH HOH . 
K 5 HOH A 182 482 185 HOH HOH . 
K 5 HOH A 183 483 136 HOH HOH . 
K 5 HOH A 184 484 166 HOH HOH . 
K 5 HOH A 185 485 188 HOH HOH . 
K 5 HOH A 186 486 139 HOH HOH . 
K 5 HOH A 187 487 187 HOH HOH . 
K 5 HOH A 188 488 138 HOH HOH . 
K 5 HOH A 189 489 135 HOH HOH . 
K 5 HOH A 190 490 204 HOH HOH . 
K 5 HOH A 191 491 284 HOH HOH . 
K 5 HOH A 192 492 83 HOH HOH . 
K 5 HOH A 193 493 262 HOH HOH . 
K 5 HOH A 194 494 170 HOH HOH . 
K 5 HOH A 195 495 191 HOH HOH . 
K 5 HOH A 196 496 173 HOH HOH . 
K 5 HOH A 197 497 119 HOH HOH . 
K 5 HOH A 198 498 37 HOH HOH . 
K 5 HOH A 199 499 61 HOH HOH . 
K 5 HOH A 200 500 194 HOH HOH . 
K 5 HOH A 201 501 168 HOH HOH . 
K 5 HOH A 202 502 241 HOH HOH . 
K 5 HOH A 203 503 104 HOH HOH . 
K 5 HOH A 204 504 162 HOH HOH . 
K 5 HOH A 205 505 59 HOH HOH . 
K 5 HOH A 206 506 251 HOH HOH . 
K 5 HOH A 207 507 181 HOH HOH . 
K 5 HOH A 208 508 236 HOH HOH . 
K 5 HOH A 209 509 274 HOH HOH . 
K 5 HOH A 210 510 67 HOH HOH . 
K 5 HOH A 211 511 211 HOH HOH . 
K 5 HOH A 212 512 129 HOH HOH . 
K 5 HOH A 213 513 142 HOH HOH . 
K 5 HOH A 214 514 145 HOH HOH . 
K 5 HOH A 215 515 164 HOH HOH . 
K 5 HOH A 216 516 90 HOH HOH . 
K 5 HOH A 217 517 118 HOH HOH . 
K 5 HOH A 218 518 288 HOH HOH . 
K 5 HOH A 219 519 186 HOH HOH . 
K 5 HOH A 220 520 30 HOH HOH . 
K 5 HOH A 221 521 141 HOH HOH . 
K 5 HOH A 222 522 93 HOH HOH . 
K 5 HOH A 223 523 208 HOH HOH . 
K 5 HOH A 224 524 99 HOH HOH . 
K 5 HOH A 225 525 244 HOH HOH . 
K 5 HOH A 226 526 169 HOH HOH . 
K 5 HOH A 227 527 277 HOH HOH . 
K 5 HOH A 228 528 65 HOH HOH . 
K 5 HOH A 229 529 88 HOH HOH . 
K 5 HOH A 230 530 230 HOH HOH . 
K 5 HOH A 231 531 198 HOH HOH . 
K 5 HOH A 232 532 74 HOH HOH . 
K 5 HOH A 233 533 171 HOH HOH . 
K 5 HOH A 234 534 257 HOH HOH . 
K 5 HOH A 235 535 292 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 4 2.301 3.534 -12.048 1 24.81 ? C1 EDO 209 A 1 
HETATM 2 O O1 EDO . . . J 4 2.634 4.329 -10.881 1 24.54 ? O1 EDO 209 A 1 
HETATM 3 C C2 EDO . . . J 4 1.554 2.254 -11.597 1 28.48 ? C2 EDO 209 A 1 
HETATM 4 O O2 EDO . . . J 4 2.083 1.157 -12.33 1 30.75 ? O2 EDO 209 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#