data_5SCT # _model_server_result.job_id duT-eXVJ-_z8vhlcq47E5Q _model_server_result.datetime_utc '2024-12-12 07:48:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sct # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5SCT # _exptl.entry_id 5SCT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.554 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)-N-(dimethylsulfamoyl)propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SCT _cell.length_a 29.19 _cell.length_b 67.17 _cell.length_c 72.45 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SCT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H30 N6 O5 S' _chem_comp.formula_weight 466.554 _chem_comp.id H03 _chem_comp.mon_nstd_flag . _chem_comp.name 3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)-N-(dimethylsulfamoyl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C01 H03 sing 129 n n C03 C02 H03 sing 130 n n N04 C03 H03 doub 131 n y C05 N04 H03 sing 132 n y N06 C05 H03 sing 133 n n N07 C05 H03 doub 134 n y C08 N07 H03 sing 135 n y N09 C08 H03 sing 136 n n C10 C08 H03 doub 137 n y O11 C10 H03 sing 138 n n C12 O11 H03 sing 139 n n C13 C12 H03 sing 140 n n C14 C13 H03 sing 141 n n O15 C14 H03 sing 142 n n C16 O15 H03 sing 143 n n C17 C16 H03 doub 144 n y C18 C17 H03 sing 145 n y C19 C18 H03 doub 146 n y C20 C19 H03 sing 147 n y C21 C20 H03 doub 148 n y C22 C21 H03 sing 149 n n C23 C22 H03 sing 150 n n C24 C23 H03 sing 151 n n O25 C24 H03 doub 152 n n N26 C24 H03 sing 153 n n S27 N26 H03 sing 154 n n O28 S27 H03 doub 155 n n O29 S27 H03 doub 156 n n N30 S27 H03 sing 157 n n C31 N30 H03 sing 158 n n C32 N30 H03 sing 159 n n C03 C10 H03 sing 160 n y C16 C21 H03 sing 161 n y C01 H012 H03 sing 162 n n C01 H011 H03 sing 163 n n C01 H013 H03 sing 164 n n C02 H021 H03 sing 165 n n C02 H022 H03 sing 166 n n N06 H062 H03 sing 167 n n N06 H061 H03 sing 168 n n N09 H092 H03 sing 169 n n N09 H091 H03 sing 170 n n C12 H121 H03 sing 171 n n C12 H122 H03 sing 172 n n C13 H132 H03 sing 173 n n C13 H131 H03 sing 174 n n C14 H142 H03 sing 175 n n C14 H141 H03 sing 176 n n C17 H171 H03 sing 177 n n C18 H181 H03 sing 178 n n C19 H191 H03 sing 179 n n C20 H201 H03 sing 180 n n C22 H222 H03 sing 181 n n C22 H221 H03 sing 182 n n C23 H231 H03 sing 183 n n C23 H232 H03 sing 184 n n N26 H261 H03 sing 185 n n C31 H313 H03 sing 186 n n C31 H312 H03 sing 187 n n C31 H311 H03 sing 188 n n C32 H323 H03 sing 189 n n C32 H321 H03 sing 190 n n C32 H322 H03 sing 191 n n # _atom_sites.entry_id 5SCT _atom_sites.fract_transf_matrix[1][1] 0.034258 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013803 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 201 160 NAP NAP . C 3 H03 A 1 202 161 H03 601 . D 4 HOH A 1 301 59 HOH HOH . D 4 HOH A 2 302 115 HOH HOH . D 4 HOH A 3 303 124 HOH HOH . D 4 HOH A 4 304 67 HOH HOH . D 4 HOH A 5 305 60 HOH HOH . D 4 HOH A 6 306 145 HOH HOH . D 4 HOH A 7 307 135 HOH HOH . D 4 HOH A 8 308 10 HOH HOH . D 4 HOH A 9 309 93 HOH HOH . D 4 HOH A 10 310 49 HOH HOH . D 4 HOH A 11 311 144 HOH HOH . D 4 HOH A 12 312 142 HOH HOH . D 4 HOH A 13 313 141 HOH HOH . D 4 HOH A 14 314 63 HOH HOH . D 4 HOH A 15 315 114 HOH HOH . D 4 HOH A 16 316 72 HOH HOH . D 4 HOH A 17 317 140 HOH HOH . D 4 HOH A 18 318 46 HOH HOH . D 4 HOH A 19 319 143 HOH HOH . D 4 HOH A 20 320 73 HOH HOH . D 4 HOH A 21 321 108 HOH HOH . D 4 HOH A 22 322 92 HOH HOH . D 4 HOH A 23 323 51 HOH HOH . D 4 HOH A 24 324 22 HOH HOH . D 4 HOH A 25 325 128 HOH HOH . D 4 HOH A 26 326 79 HOH HOH . D 4 HOH A 27 327 83 HOH HOH . D 4 HOH A 28 328 54 HOH HOH . D 4 HOH A 29 329 146 HOH HOH . D 4 HOH A 30 330 26 HOH HOH . D 4 HOH A 31 331 66 HOH HOH . D 4 HOH A 32 332 132 HOH HOH . D 4 HOH A 33 333 32 HOH HOH . D 4 HOH A 34 334 139 HOH HOH . D 4 HOH A 35 335 6 HOH HOH . D 4 HOH A 36 336 131 HOH HOH . D 4 HOH A 37 337 5 HOH HOH . D 4 HOH A 38 338 52 HOH HOH . D 4 HOH A 39 339 33 HOH HOH . D 4 HOH A 40 340 37 HOH HOH . D 4 HOH A 41 341 80 HOH HOH . D 4 HOH A 42 342 56 HOH HOH . D 4 HOH A 43 343 19 HOH HOH . D 4 HOH A 44 344 42 HOH HOH . D 4 HOH A 45 345 138 HOH HOH . D 4 HOH A 46 346 147 HOH HOH . D 4 HOH A 47 347 36 HOH HOH . D 4 HOH A 48 348 41 HOH HOH . D 4 HOH A 49 349 99 HOH HOH . D 4 HOH A 50 350 82 HOH HOH . D 4 HOH A 51 351 86 HOH HOH . D 4 HOH A 52 352 68 HOH HOH . D 4 HOH A 53 353 110 HOH HOH . D 4 HOH A 54 354 61 HOH HOH . D 4 HOH A 55 355 23 HOH HOH . D 4 HOH A 56 356 45 HOH HOH . D 4 HOH A 57 357 69 HOH HOH . D 4 HOH A 58 358 27 HOH HOH . D 4 HOH A 59 359 88 HOH HOH . D 4 HOH A 60 360 25 HOH HOH . D 4 HOH A 61 361 58 HOH HOH . D 4 HOH A 62 362 20 HOH HOH . D 4 HOH A 63 363 161 HOH HOH . D 4 HOH A 64 364 13 HOH HOH . D 4 HOH A 65 365 87 HOH HOH . D 4 HOH A 66 366 157 HOH HOH . D 4 HOH A 67 367 55 HOH HOH . D 4 HOH A 68 368 16 HOH HOH . D 4 HOH A 69 369 29 HOH HOH . D 4 HOH A 70 370 137 HOH HOH . D 4 HOH A 71 371 30 HOH HOH . D 4 HOH A 72 372 89 HOH HOH . D 4 HOH A 73 373 129 HOH HOH . D 4 HOH A 74 374 17 HOH HOH . D 4 HOH A 75 375 71 HOH HOH . D 4 HOH A 76 376 12 HOH HOH . D 4 HOH A 77 377 8 HOH HOH . D 4 HOH A 78 378 96 HOH HOH . D 4 HOH A 79 379 65 HOH HOH . D 4 HOH A 80 380 117 HOH HOH . D 4 HOH A 81 381 11 HOH HOH . D 4 HOH A 82 382 44 HOH HOH . D 4 HOH A 83 383 24 HOH HOH . D 4 HOH A 84 384 98 HOH HOH . D 4 HOH A 85 385 3 HOH HOH . D 4 HOH A 86 386 21 HOH HOH . D 4 HOH A 87 387 4 HOH HOH . D 4 HOH A 88 388 50 HOH HOH . D 4 HOH A 89 389 40 HOH HOH . D 4 HOH A 90 390 74 HOH HOH . D 4 HOH A 91 391 91 HOH HOH . D 4 HOH A 92 392 7 HOH HOH . D 4 HOH A 93 393 95 HOH HOH . D 4 HOH A 94 394 77 HOH HOH . D 4 HOH A 95 395 48 HOH HOH . D 4 HOH A 96 396 14 HOH HOH . D 4 HOH A 97 397 53 HOH HOH . D 4 HOH A 98 398 121 HOH HOH . D 4 HOH A 99 399 1 HOH HOH . D 4 HOH A 100 400 94 HOH HOH . D 4 HOH A 101 401 123 HOH HOH . D 4 HOH A 102 402 119 HOH HOH . D 4 HOH A 103 403 148 HOH HOH . D 4 HOH A 104 404 15 HOH HOH . D 4 HOH A 105 405 34 HOH HOH . D 4 HOH A 106 406 150 HOH HOH . D 4 HOH A 107 407 18 HOH HOH . D 4 HOH A 108 408 38 HOH HOH . D 4 HOH A 109 409 109 HOH HOH . D 4 HOH A 110 410 47 HOH HOH . D 4 HOH A 111 411 57 HOH HOH . D 4 HOH A 112 412 116 HOH HOH . D 4 HOH A 113 413 120 HOH HOH . D 4 HOH A 114 414 28 HOH HOH . D 4 HOH A 115 415 85 HOH HOH . D 4 HOH A 116 416 127 HOH HOH . D 4 HOH A 117 417 35 HOH HOH . D 4 HOH A 118 418 133 HOH HOH . D 4 HOH A 119 419 125 HOH HOH . D 4 HOH A 120 420 75 HOH HOH . D 4 HOH A 121 421 151 HOH HOH . D 4 HOH A 122 422 113 HOH HOH . D 4 HOH A 123 423 9 HOH HOH . D 4 HOH A 124 424 103 HOH HOH . D 4 HOH A 125 425 100 HOH HOH . D 4 HOH A 126 426 31 HOH HOH . D 4 HOH A 127 427 126 HOH HOH . D 4 HOH A 128 428 122 HOH HOH . D 4 HOH A 129 429 78 HOH HOH . D 4 HOH A 130 430 106 HOH HOH . D 4 HOH A 131 431 134 HOH HOH . D 4 HOH A 132 432 136 HOH HOH . D 4 HOH A 133 433 76 HOH HOH . D 4 HOH A 134 434 155 HOH HOH . D 4 HOH A 135 435 62 HOH HOH . D 4 HOH A 136 436 39 HOH HOH . D 4 HOH A 137 437 105 HOH HOH . D 4 HOH A 138 438 64 HOH HOH . D 4 HOH A 139 439 149 HOH HOH . D 4 HOH A 140 440 70 HOH HOH . D 4 HOH A 141 441 43 HOH HOH . D 4 HOH A 142 442 112 HOH HOH . D 4 HOH A 143 443 81 HOH HOH . D 4 HOH A 144 444 130 HOH HOH . D 4 HOH A 145 445 101 HOH HOH . D 4 HOH A 146 446 2 HOH HOH . D 4 HOH A 147 447 118 HOH HOH . D 4 HOH A 148 448 102 HOH HOH . D 4 HOH A 149 449 84 HOH HOH . D 4 HOH A 150 450 104 HOH HOH . D 4 HOH A 151 451 156 HOH HOH . D 4 HOH A 152 452 111 HOH HOH . D 4 HOH A 153 453 163 HOH HOH . D 4 HOH A 154 454 164 HOH HOH . D 4 HOH A 155 455 162 HOH HOH . D 4 HOH A 156 456 159 HOH HOH . D 4 HOH A 157 457 90 HOH HOH . D 4 HOH A 158 458 153 HOH HOH . D 4 HOH A 159 459 152 HOH HOH . D 4 HOH A 160 460 158 HOH HOH . D 4 HOH A 161 461 107 HOH HOH . D 4 HOH A 162 462 154 HOH HOH . D 4 HOH A 163 463 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 H03 . . . C 3 5.326 3.546 16.462 1 10.95 ? C01 H03 202 A 1 HETATM 2 C C02 H03 . . . C 3 6.771 3.085 16.73 1 10.28 ? C02 H03 202 A 1 HETATM 3 C C03 H03 . . . C 3 7.768 4.093 16.19 1 8.27 ? C03 H03 202 A 1 HETATM 4 N N04 H03 . . . C 3 7.729 5.347 16.725 1 7.66 ? N04 H03 202 A 1 HETATM 5 C C05 H03 . . . C 3 8.55 6.274 16.268 1 8.35 ? C05 H03 202 A 1 HETATM 6 N N06 H03 . . . C 3 8.426 7.565 16.815 1 8.33 ? N06 H03 202 A 1 HETATM 7 N N07 H03 . . . C 3 9.42 6.041 15.315 1 6.27 ? N07 H03 202 A 1 HETATM 8 C C08 H03 . . . C 3 9.558 4.782 14.805 1 9.05 ? C08 H03 202 A 1 HETATM 9 N N09 H03 . . . C 3 10.387 4.572 13.884 1 7.58 ? N09 H03 202 A 1 HETATM 10 C C10 H03 . . . C 3 8.67 3.749 15.22 1 10.48 ? C10 H03 202 A 1 HETATM 11 O O11 H03 . . . C 3 8.753 2.565 14.69 1 8.22 ? O11 H03 202 A 1 HETATM 12 C C12 H03 . . . C 3 7.734 2.195 13.749 1 10.51 ? C12 H03 202 A 1 HETATM 13 C C13 H03 . . . C 3 8.266 1.102 12.858 1 10.9 ? C13 H03 202 A 1 HETATM 14 C C14 H03 . . . C 3 8.772 -0.081 13.558 1 13.79 ? C14 H03 202 A 1 HETATM 15 O O15 H03 . . . C 3 7.787 -0.721 14.232 1 12.28 ? O15 H03 202 A 1 HETATM 16 C C16 H03 . . . C 3 8.024 -1.821 14.985 1 8.96 ? C16 H03 202 A 1 HETATM 17 C C17 H03 . . . C 3 9.268 -2.407 15.115 1 11.77 ? C17 H03 202 A 1 HETATM 18 C C18 H03 . . . C 3 9.496 -3.506 15.833 1 15.68 ? C18 H03 202 A 1 HETATM 19 C C19 H03 . . . C 3 8.503 -4.11 16.486 1 18.06 ? C19 H03 202 A 1 HETATM 20 C C20 H03 . . . C 3 7.262 -3.58 16.379 1 15.18 ? C20 H03 202 A 1 HETATM 21 C C21 H03 . . . C 3 6.966 -2.449 15.615 1 13.96 ? C21 H03 202 A 1 HETATM 22 C C22 H03 . . . C 3 5.647 -1.908 15.545 1 16.42 ? C22 H03 202 A 1 HETATM 23 C C23 H03 . . . C 3 5.193 -1.065 16.785 1 14.97 ? C23 H03 202 A 1 HETATM 24 C C24 H03 . . . C 3 4.005 -0.183 16.575 1 18.27 ? C24 H03 202 A 1 HETATM 25 O O25 H03 . . . C 3 3.669 0.517 17.381 1 15.01 ? O25 H03 202 A 1 HETATM 26 N N26 H03 . . . C 3 3.332 -0.3 15.384 1 18.29 ? N26 H03 202 A 1 HETATM 27 S S27 H03 . . . C 3 2.145 0.583 14.879 1 19.17 ? S27 H03 202 A 1 HETATM 28 O O28 H03 . . . C 3 2.387 1.781 15.094 1 20.38 ? O28 H03 202 A 1 HETATM 29 O O29 H03 . . . C 3 0.968 0.208 15.223 1 24.77 ? O29 H03 202 A 1 HETATM 30 N N30 H03 . . . C 3 2.277 0.457 13.223 1 22.75 ? N30 H03 202 A 1 HETATM 31 C C31 H03 . . . C 3 1.899 -0.672 12.635 1 25.73 ? C31 H03 202 A 1 HETATM 32 C C32 H03 . . . C 3 3.444 0.956 12.546 1 22.82 ? C32 H03 202 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 719 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 32 #