data_5SD0 # _model_server_result.job_id K3zHpGXF5fmaovxzVXDk6A _model_server_result.datetime_utc '2024-10-18 12:30:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sd0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":208}' # _entry.id 5SD0 # _exptl.entry_id 5SD0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SD0 _cell.length_a 29.48 _cell.length_b 67.13 _cell.length_c 72.14 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SD0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 92 n n C O2 FMT sing 93 n n C H FMT sing 94 n n O2 HO2 FMT sing 95 n n # _atom_sites.entry_id 5SD0 _atom_sites.fract_transf_matrix[1][1] 0.033921 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 201 160 NAP NAP . C 3 HIK A 1 202 161 HIK 225 . D 4 CL A 1 203 162 CL CL . E 5 EDO A 1 204 163 EDO EDO . F 5 EDO A 1 205 164 EDO EDO . G 5 EDO A 1 206 165 EDO EDO . H 5 EDO A 1 207 166 EDO EDO . I 6 FMT A 1 208 1 FMT FMT . J 7 HOH A 1 301 355 HOH HOH . J 7 HOH A 2 302 218 HOH HOH . J 7 HOH A 3 303 240 HOH HOH . J 7 HOH A 4 304 367 HOH HOH . J 7 HOH A 5 305 269 HOH HOH . J 7 HOH A 6 306 322 HOH HOH . J 7 HOH A 7 307 385 HOH HOH . J 7 HOH A 8 308 318 HOH HOH . J 7 HOH A 9 309 304 HOH HOH . J 7 HOH A 10 310 238 HOH HOH . J 7 HOH A 11 311 307 HOH HOH . J 7 HOH A 12 312 370 HOH HOH . J 7 HOH A 13 313 197 HOH HOH . J 7 HOH A 14 314 277 HOH HOH . J 7 HOH A 15 315 234 HOH HOH . J 7 HOH A 16 316 188 HOH HOH . J 7 HOH A 17 317 245 HOH HOH . J 7 HOH A 18 318 291 HOH HOH . J 7 HOH A 19 319 242 HOH HOH . J 7 HOH A 20 320 300 HOH HOH . J 7 HOH A 21 321 203 HOH HOH . J 7 HOH A 22 322 233 HOH HOH . J 7 HOH A 23 323 244 HOH HOH . J 7 HOH A 24 324 187 HOH HOH . J 7 HOH A 25 325 228 HOH HOH . J 7 HOH A 26 326 297 HOH HOH . J 7 HOH A 27 327 200 HOH HOH . J 7 HOH A 28 328 247 HOH HOH . J 7 HOH A 29 329 298 HOH HOH . J 7 HOH A 30 330 286 HOH HOH . J 7 HOH A 31 331 263 HOH HOH . J 7 HOH A 32 332 268 HOH HOH . J 7 HOH A 33 333 288 HOH HOH . J 7 HOH A 34 334 202 HOH HOH . J 7 HOH A 35 335 336 HOH HOH . J 7 HOH A 36 336 346 HOH HOH . J 7 HOH A 37 337 267 HOH HOH . J 7 HOH A 38 338 229 HOH HOH . J 7 HOH A 39 339 184 HOH HOH . J 7 HOH A 40 340 343 HOH HOH . J 7 HOH A 41 341 309 HOH HOH . J 7 HOH A 42 342 171 HOH HOH . J 7 HOH A 43 343 221 HOH HOH . J 7 HOH A 44 344 289 HOH HOH . J 7 HOH A 45 345 380 HOH HOH . J 7 HOH A 46 346 166 HOH HOH . J 7 HOH A 47 347 190 HOH HOH . J 7 HOH A 48 348 186 HOH HOH . J 7 HOH A 49 349 178 HOH HOH . J 7 HOH A 50 350 260 HOH HOH . J 7 HOH A 51 351 194 HOH HOH . J 7 HOH A 52 352 189 HOH HOH . J 7 HOH A 53 353 183 HOH HOH . J 7 HOH A 54 354 323 HOH HOH . J 7 HOH A 55 355 163 HOH HOH . J 7 HOH A 56 356 224 HOH HOH . J 7 HOH A 57 357 326 HOH HOH . J 7 HOH A 58 358 330 HOH HOH . J 7 HOH A 59 359 264 HOH HOH . J 7 HOH A 60 360 255 HOH HOH . J 7 HOH A 61 361 181 HOH HOH . J 7 HOH A 62 362 258 HOH HOH . J 7 HOH A 63 363 313 HOH HOH . J 7 HOH A 64 364 231 HOH HOH . J 7 HOH A 65 365 243 HOH HOH . J 7 HOH A 66 366 250 HOH HOH . J 7 HOH A 67 367 206 HOH HOH . J 7 HOH A 68 368 230 HOH HOH . J 7 HOH A 69 369 174 HOH HOH . J 7 HOH A 70 370 275 HOH HOH . J 7 HOH A 71 371 191 HOH HOH . J 7 HOH A 72 372 314 HOH HOH . J 7 HOH A 73 373 341 HOH HOH . J 7 HOH A 74 374 207 HOH HOH . J 7 HOH A 75 375 201 HOH HOH . J 7 HOH A 76 376 278 HOH HOH . J 7 HOH A 77 377 222 HOH HOH . J 7 HOH A 78 378 372 HOH HOH . J 7 HOH A 79 379 199 HOH HOH . J 7 HOH A 80 380 213 HOH HOH . J 7 HOH A 81 381 168 HOH HOH . J 7 HOH A 82 382 169 HOH HOH . J 7 HOH A 83 383 350 HOH HOH . J 7 HOH A 84 384 215 HOH HOH . J 7 HOH A 85 385 338 HOH HOH . J 7 HOH A 86 386 290 HOH HOH . J 7 HOH A 87 387 165 HOH HOH . J 7 HOH A 88 388 324 HOH HOH . J 7 HOH A 89 389 303 HOH HOH . J 7 HOH A 90 390 356 HOH HOH . J 7 HOH A 91 391 363 HOH HOH . J 7 HOH A 92 392 257 HOH HOH . J 7 HOH A 93 393 209 HOH HOH . J 7 HOH A 94 394 167 HOH HOH . J 7 HOH A 95 395 256 HOH HOH . J 7 HOH A 96 396 239 HOH HOH . J 7 HOH A 97 397 195 HOH HOH . J 7 HOH A 98 398 217 HOH HOH . J 7 HOH A 99 399 271 HOH HOH . J 7 HOH A 100 400 329 HOH HOH . J 7 HOH A 101 401 373 HOH HOH . J 7 HOH A 102 402 262 HOH HOH . J 7 HOH A 103 403 317 HOH HOH . J 7 HOH A 104 404 192 HOH HOH . J 7 HOH A 105 405 365 HOH HOH . J 7 HOH A 106 406 295 HOH HOH . J 7 HOH A 107 407 185 HOH HOH . J 7 HOH A 108 408 325 HOH HOH . J 7 HOH A 109 409 254 HOH HOH . J 7 HOH A 110 410 274 HOH HOH . J 7 HOH A 111 411 292 HOH HOH . J 7 HOH A 112 412 235 HOH HOH . J 7 HOH A 113 413 294 HOH HOH . J 7 HOH A 114 414 182 HOH HOH . J 7 HOH A 115 415 214 HOH HOH . J 7 HOH A 116 416 328 HOH HOH . J 7 HOH A 117 417 374 HOH HOH . J 7 HOH A 118 418 339 HOH HOH . J 7 HOH A 119 419 287 HOH HOH . J 7 HOH A 120 420 220 HOH HOH . J 7 HOH A 121 421 320 HOH HOH . J 7 HOH A 122 422 210 HOH HOH . J 7 HOH A 123 423 282 HOH HOH . J 7 HOH A 124 424 261 HOH HOH . J 7 HOH A 125 425 296 HOH HOH . J 7 HOH A 126 426 312 HOH HOH . J 7 HOH A 127 427 248 HOH HOH . J 7 HOH A 128 428 232 HOH HOH . J 7 HOH A 129 429 241 HOH HOH . J 7 HOH A 130 430 342 HOH HOH . J 7 HOH A 131 431 331 HOH HOH . J 7 HOH A 132 432 216 HOH HOH . J 7 HOH A 133 433 308 HOH HOH . J 7 HOH A 134 434 337 HOH HOH . J 7 HOH A 135 435 172 HOH HOH . J 7 HOH A 136 436 227 HOH HOH . J 7 HOH A 137 437 266 HOH HOH . J 7 HOH A 138 438 270 HOH HOH . J 7 HOH A 139 439 205 HOH HOH . J 7 HOH A 140 440 364 HOH HOH . J 7 HOH A 141 441 193 HOH HOH . J 7 HOH A 142 442 348 HOH HOH . J 7 HOH A 143 443 196 HOH HOH . J 7 HOH A 144 444 334 HOH HOH . J 7 HOH A 145 445 281 HOH HOH . J 7 HOH A 146 446 351 HOH HOH . J 7 HOH A 147 447 361 HOH HOH . J 7 HOH A 148 448 345 HOH HOH . J 7 HOH A 149 449 226 HOH HOH . J 7 HOH A 150 450 349 HOH HOH . J 7 HOH A 151 451 354 HOH HOH . J 7 HOH A 152 452 252 HOH HOH . J 7 HOH A 153 453 315 HOH HOH . J 7 HOH A 154 454 219 HOH HOH . J 7 HOH A 155 455 299 HOH HOH . J 7 HOH A 156 456 371 HOH HOH . J 7 HOH A 157 457 383 HOH HOH . J 7 HOH A 158 458 333 HOH HOH . J 7 HOH A 159 459 384 HOH HOH . J 7 HOH A 160 460 376 HOH HOH . J 7 HOH A 161 461 379 HOH HOH . J 7 HOH A 162 462 249 HOH HOH . J 7 HOH A 163 463 276 HOH HOH . J 7 HOH A 164 464 358 HOH HOH . J 7 HOH A 165 465 377 HOH HOH . J 7 HOH A 166 466 316 HOH HOH . J 7 HOH A 167 467 279 HOH HOH . J 7 HOH A 168 468 253 HOH HOH . J 7 HOH A 169 469 382 HOH HOH . J 7 HOH A 170 470 285 HOH HOH . J 7 HOH A 171 471 381 HOH HOH . J 7 HOH A 172 472 360 HOH HOH . J 7 HOH A 173 473 211 HOH HOH . J 7 HOH A 174 474 368 HOH HOH . J 7 HOH A 175 475 293 HOH HOH . J 7 HOH A 176 476 357 HOH HOH . J 7 HOH A 177 477 272 HOH HOH . J 7 HOH A 178 478 369 HOH HOH . J 7 HOH A 179 479 332 HOH HOH . J 7 HOH A 180 480 204 HOH HOH . J 7 HOH A 181 481 223 HOH HOH . J 7 HOH A 182 482 375 HOH HOH . J 7 HOH A 183 483 327 HOH HOH . J 7 HOH A 184 484 378 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . I 6 20.93 -13.222 16.413 1 53.44 ? C FMT 208 A 1 HETATM 2 O O1 FMT . . . I 6 20.151 -12.277 16.314 1 54.62 ? O1 FMT 208 A 1 HETATM 3 O O2 FMT . . . I 6 20.607 -14.323 16.857 1 54.56 ? O2 FMT 208 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 3 #