data_5SD1
#
_model_server_result.job_id            oMfq9QfgCRUbGUBsbAhNkQ 
_model_server_result.datetime_utc      '2024-11-29 14:55:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5sd1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    5SD1 
#
_exptl.entry_id    5SD1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5SD1 
_cell.length_a            29.45 
_cell.length_b            67.32 
_cell.length_c            72.29 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5SD1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5SD1 
_atom_sites.fract_transf_matrix[1][1]    0.033956 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014854 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013833 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 201 160 NAP NAP . 
C 3 I6J A 1 202 161 I6J LIG . 
D 4 EDO A 1 203 163 EDO EDO . 
E 4 EDO A 1 204 164 EDO EDO . 
F 5 FMT A 1 205 165 FMT FMT . 
G 6 HOH A 1 301 100 HOH HOH . 
G 6 HOH A 2 302 99 HOH HOH . 
G 6 HOH A 3 303 6 HOH HOH . 
G 6 HOH A 4 304 39 HOH HOH . 
G 6 HOH A 5 305 75 HOH HOH . 
G 6 HOH A 6 306 56 HOH HOH . 
G 6 HOH A 7 307 140 HOH HOH . 
G 6 HOH A 8 308 151 HOH HOH . 
G 6 HOH A 9 309 72 HOH HOH . 
G 6 HOH A 10 310 148 HOH HOH . 
G 6 HOH A 11 311 93 HOH HOH . 
G 6 HOH A 12 312 94 HOH HOH . 
G 6 HOH A 13 313 32 HOH HOH . 
G 6 HOH A 14 314 109 HOH HOH . 
G 6 HOH A 15 315 12 HOH HOH . 
G 6 HOH A 16 316 62 HOH HOH . 
G 6 HOH A 17 317 139 HOH HOH . 
G 6 HOH A 18 318 44 HOH HOH . 
G 6 HOH A 19 319 76 HOH HOH . 
G 6 HOH A 20 320 29 HOH HOH . 
G 6 HOH A 21 321 141 HOH HOH . 
G 6 HOH A 22 322 11 HOH HOH . 
G 6 HOH A 23 323 59 HOH HOH . 
G 6 HOH A 24 324 69 HOH HOH . 
G 6 HOH A 25 325 52 HOH HOH . 
G 6 HOH A 26 326 96 HOH HOH . 
G 6 HOH A 27 327 25 HOH HOH . 
G 6 HOH A 28 328 37 HOH HOH . 
G 6 HOH A 29 329 101 HOH HOH . 
G 6 HOH A 30 330 24 HOH HOH . 
G 6 HOH A 31 331 49 HOH HOH . 
G 6 HOH A 32 332 36 HOH HOH . 
G 6 HOH A 33 333 19 HOH HOH . 
G 6 HOH A 34 334 74 HOH HOH . 
G 6 HOH A 35 335 28 HOH HOH . 
G 6 HOH A 36 336 111 HOH HOH . 
G 6 HOH A 37 337 15 HOH HOH . 
G 6 HOH A 38 338 18 HOH HOH . 
G 6 HOH A 39 339 85 HOH HOH . 
G 6 HOH A 40 340 38 HOH HOH . 
G 6 HOH A 41 341 137 HOH HOH . 
G 6 HOH A 42 342 147 HOH HOH . 
G 6 HOH A 43 343 58 HOH HOH . 
G 6 HOH A 44 344 60 HOH HOH . 
G 6 HOH A 45 345 46 HOH HOH . 
G 6 HOH A 46 346 35 HOH HOH . 
G 6 HOH A 47 347 112 HOH HOH . 
G 6 HOH A 48 348 22 HOH HOH . 
G 6 HOH A 49 349 122 HOH HOH . 
G 6 HOH A 50 350 68 HOH HOH . 
G 6 HOH A 51 351 63 HOH HOH . 
G 6 HOH A 52 352 17 HOH HOH . 
G 6 HOH A 53 353 108 HOH HOH . 
G 6 HOH A 54 354 55 HOH HOH . 
G 6 HOH A 55 355 20 HOH HOH . 
G 6 HOH A 56 356 54 HOH HOH . 
G 6 HOH A 57 357 13 HOH HOH . 
G 6 HOH A 58 358 4 HOH HOH . 
G 6 HOH A 59 359 64 HOH HOH . 
G 6 HOH A 60 360 149 HOH HOH . 
G 6 HOH A 61 361 155 HOH HOH . 
G 6 HOH A 62 362 98 HOH HOH . 
G 6 HOH A 63 363 21 HOH HOH . 
G 6 HOH A 64 364 129 HOH HOH . 
G 6 HOH A 65 365 138 HOH HOH . 
G 6 HOH A 66 366 16 HOH HOH . 
G 6 HOH A 67 367 27 HOH HOH . 
G 6 HOH A 68 368 102 HOH HOH . 
G 6 HOH A 69 369 89 HOH HOH . 
G 6 HOH A 70 370 26 HOH HOH . 
G 6 HOH A 71 371 71 HOH HOH . 
G 6 HOH A 72 372 34 HOH HOH . 
G 6 HOH A 73 373 82 HOH HOH . 
G 6 HOH A 74 374 110 HOH HOH . 
G 6 HOH A 75 375 81 HOH HOH . 
G 6 HOH A 76 376 152 HOH HOH . 
G 6 HOH A 77 377 135 HOH HOH . 
G 6 HOH A 78 378 150 HOH HOH . 
G 6 HOH A 79 379 41 HOH HOH . 
G 6 HOH A 80 380 161 HOH HOH . 
G 6 HOH A 81 381 124 HOH HOH . 
G 6 HOH A 82 382 23 HOH HOH . 
G 6 HOH A 83 383 120 HOH HOH . 
G 6 HOH A 84 384 53 HOH HOH . 
G 6 HOH A 85 385 113 HOH HOH . 
G 6 HOH A 86 386 78 HOH HOH . 
G 6 HOH A 87 387 51 HOH HOH . 
G 6 HOH A 88 388 92 HOH HOH . 
G 6 HOH A 89 389 10 HOH HOH . 
G 6 HOH A 90 390 115 HOH HOH . 
G 6 HOH A 91 391 128 HOH HOH . 
G 6 HOH A 92 392 79 HOH HOH . 
G 6 HOH A 93 393 33 HOH HOH . 
G 6 HOH A 94 394 132 HOH HOH . 
G 6 HOH A 95 395 40 HOH HOH . 
G 6 HOH A 96 396 70 HOH HOH . 
G 6 HOH A 97 397 7 HOH HOH . 
G 6 HOH A 98 398 123 HOH HOH . 
G 6 HOH A 99 399 118 HOH HOH . 
G 6 HOH A 100 400 143 HOH HOH . 
G 6 HOH A 101 401 119 HOH HOH . 
G 6 HOH A 102 402 83 HOH HOH . 
G 6 HOH A 103 403 42 HOH HOH . 
G 6 HOH A 104 404 106 HOH HOH . 
G 6 HOH A 105 405 153 HOH HOH . 
G 6 HOH A 106 406 9 HOH HOH . 
G 6 HOH A 107 407 50 HOH HOH . 
G 6 HOH A 108 408 105 HOH HOH . 
G 6 HOH A 109 409 77 HOH HOH . 
G 6 HOH A 110 410 30 HOH HOH . 
G 6 HOH A 111 411 145 HOH HOH . 
G 6 HOH A 112 412 114 HOH HOH . 
G 6 HOH A 113 413 95 HOH HOH . 
G 6 HOH A 114 414 73 HOH HOH . 
G 6 HOH A 115 415 86 HOH HOH . 
G 6 HOH A 116 416 157 HOH HOH . 
G 6 HOH A 117 417 45 HOH HOH . 
G 6 HOH A 118 418 80 HOH HOH . 
G 6 HOH A 119 419 144 HOH HOH . 
G 6 HOH A 120 420 8 HOH HOH . 
G 6 HOH A 121 421 136 HOH HOH . 
G 6 HOH A 122 422 146 HOH HOH . 
G 6 HOH A 123 423 121 HOH HOH . 
G 6 HOH A 124 424 97 HOH HOH . 
G 6 HOH A 125 425 125 HOH HOH . 
G 6 HOH A 126 426 91 HOH HOH . 
G 6 HOH A 127 427 158 HOH HOH . 
G 6 HOH A 128 428 134 HOH HOH . 
G 6 HOH A 129 429 104 HOH HOH . 
G 6 HOH A 130 430 107 HOH HOH . 
G 6 HOH A 131 431 88 HOH HOH . 
G 6 HOH A 132 432 84 HOH HOH . 
G 6 HOH A 133 433 156 HOH HOH . 
G 6 HOH A 134 434 159 HOH HOH . 
G 6 HOH A 135 435 117 HOH HOH . 
G 6 HOH A 136 436 103 HOH HOH . 
G 6 HOH A 137 437 160 HOH HOH . 
G 6 HOH A 138 438 154 HOH HOH . 
G 6 HOH A 139 439 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 17.281 12.749 22.539 1 33.44 ? C1 EDO 203 A 1 
HETATM 2 O O1 EDO . . . D 4 17.966 12.963 21.306 1 34.15 ? O1 EDO 203 A 1 
HETATM 3 C C2 EDO . . . D 4 18.335 12.673 23.631 1 25.28 ? C2 EDO 203 A 1 
HETATM 4 O O2 EDO . . . D 4 17.732 12.09 24.787 1 37.78 ? O2 EDO 203 A 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#