data_5SDF # _model_server_result.job_id oe2vnq4Et5qmSiId6z_o9Q _model_server_result.datetime_utc '2024-11-02 01:23:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sdf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 5SDF # _exptl.entry_id 5SDF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 248.321 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2,3-dimethylphenyl)-2-(morpholin-4-yl)acetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SDF _cell.length_a 101.285 _cell.length_b 117.136 _cell.length_c 147.78 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SDF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 49 A CYS 69 1_555 A SG CYS 66 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 B SG CYS 49 B CYS 69 1_555 B SG CYS 66 B CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? # _chem_comp.formula 'C14 H20 N2 O2' _chem_comp.formula_weight 248.321 _chem_comp.id NT7 _chem_comp.mon_nstd_flag . _chem_comp.name N-(2,3-dimethylphenyl)-2-(morpholin-4-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SDF _atom_sites.fract_transf_matrix[1][1] 0.009873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008537 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006767 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NT7 A 1 801 801 NT7 LIG . D 3 CL A 1 802 1 CL CL . E 3 CL A 1 803 2 CL CL . F 2 NT7 B 1 801 801 NT7 LIG . G 3 CL B 1 802 3 CL CL . H 4 HOH A 1 901 20 HOH HOH . H 4 HOH A 2 902 61 HOH HOH . H 4 HOH A 3 903 198 HOH HOH . H 4 HOH A 4 904 247 HOH HOH . H 4 HOH A 5 905 131 HOH HOH . H 4 HOH A 6 906 52 HOH HOH . H 4 HOH A 7 907 197 HOH HOH . H 4 HOH A 8 908 277 HOH HOH . H 4 HOH A 9 909 152 HOH HOH . H 4 HOH A 10 910 262 HOH HOH . H 4 HOH A 11 911 120 HOH HOH . H 4 HOH A 12 912 204 HOH HOH . H 4 HOH A 13 913 10 HOH HOH . H 4 HOH A 14 914 81 HOH HOH . H 4 HOH A 15 915 98 HOH HOH . H 4 HOH A 16 916 158 HOH HOH . H 4 HOH A 17 917 255 HOH HOH . H 4 HOH A 18 918 59 HOH HOH . H 4 HOH A 19 919 56 HOH HOH . H 4 HOH A 20 920 9 HOH HOH . H 4 HOH A 21 921 95 HOH HOH . H 4 HOH A 22 922 6 HOH HOH . H 4 HOH A 23 923 192 HOH HOH . H 4 HOH A 24 924 83 HOH HOH . H 4 HOH A 25 925 107 HOH HOH . H 4 HOH A 26 926 27 HOH HOH . H 4 HOH A 27 927 191 HOH HOH . H 4 HOH A 28 928 251 HOH HOH . H 4 HOH A 29 929 18 HOH HOH . H 4 HOH A 30 930 265 HOH HOH . H 4 HOH A 31 931 248 HOH HOH . H 4 HOH A 32 932 274 HOH HOH . H 4 HOH A 33 933 278 HOH HOH . H 4 HOH A 34 934 32 HOH HOH . H 4 HOH A 35 935 213 HOH HOH . H 4 HOH A 36 936 72 HOH HOH . H 4 HOH A 37 937 54 HOH HOH . H 4 HOH A 38 938 139 HOH HOH . H 4 HOH A 39 939 227 HOH HOH . H 4 HOH A 40 940 130 HOH HOH . H 4 HOH A 41 941 46 HOH HOH . H 4 HOH A 42 942 159 HOH HOH . H 4 HOH A 43 943 63 HOH HOH . H 4 HOH A 44 944 3 HOH HOH . H 4 HOH A 45 945 47 HOH HOH . H 4 HOH A 46 946 140 HOH HOH . H 4 HOH A 47 947 163 HOH HOH . H 4 HOH A 48 948 80 HOH HOH . H 4 HOH A 49 949 280 HOH HOH . H 4 HOH A 50 950 188 HOH HOH . H 4 HOH A 51 951 136 HOH HOH . H 4 HOH A 52 952 150 HOH HOH . H 4 HOH A 53 953 201 HOH HOH . H 4 HOH A 54 954 35 HOH HOH . H 4 HOH A 55 955 44 HOH HOH . H 4 HOH A 56 956 169 HOH HOH . H 4 HOH A 57 957 103 HOH HOH . H 4 HOH A 58 958 91 HOH HOH . H 4 HOH A 59 959 212 HOH HOH . H 4 HOH A 60 960 220 HOH HOH . H 4 HOH A 61 961 203 HOH HOH . H 4 HOH A 62 962 141 HOH HOH . H 4 HOH A 63 963 43 HOH HOH . H 4 HOH A 64 964 28 HOH HOH . H 4 HOH A 65 965 172 HOH HOH . H 4 HOH A 66 966 226 HOH HOH . H 4 HOH A 67 967 122 HOH HOH . H 4 HOH A 68 968 26 HOH HOH . H 4 HOH A 69 969 161 HOH HOH . H 4 HOH A 70 970 104 HOH HOH . H 4 HOH A 71 971 275 HOH HOH . H 4 HOH A 72 972 132 HOH HOH . H 4 HOH A 73 973 89 HOH HOH . H 4 HOH A 74 974 194 HOH HOH . H 4 HOH A 75 975 224 HOH HOH . H 4 HOH A 76 976 178 HOH HOH . H 4 HOH A 77 977 162 HOH HOH . H 4 HOH A 78 978 239 HOH HOH . H 4 HOH A 79 979 5 HOH HOH . H 4 HOH A 80 980 205 HOH HOH . H 4 HOH A 81 981 19 HOH HOH . H 4 HOH A 82 982 276 HOH HOH . H 4 HOH A 83 983 14 HOH HOH . H 4 HOH A 84 984 64 HOH HOH . H 4 HOH A 85 985 7 HOH HOH . H 4 HOH A 86 986 273 HOH HOH . H 4 HOH A 87 987 195 HOH HOH . H 4 HOH A 88 988 77 HOH HOH . H 4 HOH A 89 989 244 HOH HOH . H 4 HOH A 90 990 206 HOH HOH . H 4 HOH A 91 991 156 HOH HOH . H 4 HOH A 92 992 69 HOH HOH . H 4 HOH A 93 993 155 HOH HOH . H 4 HOH A 94 994 113 HOH HOH . H 4 HOH A 95 995 208 HOH HOH . H 4 HOH A 96 996 34 HOH HOH . H 4 HOH A 97 997 216 HOH HOH . H 4 HOH A 98 998 108 HOH HOH . H 4 HOH A 99 999 263 HOH HOH . H 4 HOH A 100 1000 242 HOH HOH . H 4 HOH A 101 1001 153 HOH HOH . H 4 HOH A 102 1002 196 HOH HOH . H 4 HOH A 103 1003 261 HOH HOH . H 4 HOH A 104 1004 40 HOH HOH . H 4 HOH A 105 1005 109 HOH HOH . H 4 HOH A 106 1006 102 HOH HOH . H 4 HOH A 107 1007 279 HOH HOH . H 4 HOH A 108 1008 57 HOH HOH . H 4 HOH A 109 1009 126 HOH HOH . H 4 HOH A 110 1010 41 HOH HOH . H 4 HOH A 111 1011 187 HOH HOH . H 4 HOH A 112 1012 173 HOH HOH . H 4 HOH A 113 1013 36 HOH HOH . H 4 HOH A 114 1014 128 HOH HOH . H 4 HOH A 115 1015 50 HOH HOH . H 4 HOH A 116 1016 117 HOH HOH . H 4 HOH A 117 1017 200 HOH HOH . H 4 HOH A 118 1018 264 HOH HOH . H 4 HOH A 119 1019 13 HOH HOH . H 4 HOH A 120 1020 250 HOH HOH . H 4 HOH A 121 1021 111 HOH HOH . H 4 HOH A 122 1022 189 HOH HOH . H 4 HOH A 123 1023 246 HOH HOH . H 4 HOH A 124 1024 45 HOH HOH . H 4 HOH A 125 1025 177 HOH HOH . H 4 HOH A 126 1026 253 HOH HOH . H 4 HOH A 127 1027 135 HOH HOH . H 4 HOH A 128 1028 232 HOH HOH . H 4 HOH A 129 1029 160 HOH HOH . H 4 HOH A 130 1030 165 HOH HOH . H 4 HOH A 131 1031 110 HOH HOH . H 4 HOH A 132 1032 181 HOH HOH . H 4 HOH A 133 1033 209 HOH HOH . H 4 HOH A 134 1034 87 HOH HOH . H 4 HOH A 135 1035 221 HOH HOH . H 4 HOH A 136 1036 237 HOH HOH . H 4 HOH A 137 1037 249 HOH HOH . H 4 HOH A 138 1038 4 HOH HOH . H 4 HOH A 139 1039 243 HOH HOH . I 4 HOH B 1 901 84 HOH HOH . I 4 HOH B 2 902 147 HOH HOH . I 4 HOH B 3 903 39 HOH HOH . I 4 HOH B 4 904 99 HOH HOH . I 4 HOH B 5 905 78 HOH HOH . I 4 HOH B 6 906 22 HOH HOH . I 4 HOH B 7 907 143 HOH HOH . I 4 HOH B 8 908 79 HOH HOH . I 4 HOH B 9 909 182 HOH HOH . I 4 HOH B 10 910 51 HOH HOH . I 4 HOH B 11 911 148 HOH HOH . I 4 HOH B 12 912 223 HOH HOH . I 4 HOH B 13 913 259 HOH HOH . I 4 HOH B 14 914 31 HOH HOH . I 4 HOH B 15 915 134 HOH HOH . I 4 HOH B 16 916 190 HOH HOH . I 4 HOH B 17 917 228 HOH HOH . I 4 HOH B 18 918 170 HOH HOH . I 4 HOH B 19 919 65 HOH HOH . I 4 HOH B 20 920 1 HOH HOH . I 4 HOH B 21 921 16 HOH HOH . I 4 HOH B 22 922 272 HOH HOH . I 4 HOH B 23 923 210 HOH HOH . I 4 HOH B 24 924 11 HOH HOH . I 4 HOH B 25 925 85 HOH HOH . I 4 HOH B 26 926 193 HOH HOH . I 4 HOH B 27 927 211 HOH HOH . I 4 HOH B 28 928 48 HOH HOH . I 4 HOH B 29 929 176 HOH HOH . I 4 HOH B 30 930 283 HOH HOH . I 4 HOH B 31 931 49 HOH HOH . I 4 HOH B 32 932 21 HOH HOH . I 4 HOH B 33 933 114 HOH HOH . I 4 HOH B 34 934 154 HOH HOH . I 4 HOH B 35 935 121 HOH HOH . I 4 HOH B 36 936 70 HOH HOH . I 4 HOH B 37 937 30 HOH HOH . I 4 HOH B 38 938 76 HOH HOH . I 4 HOH B 39 939 175 HOH HOH . I 4 HOH B 40 940 146 HOH HOH . I 4 HOH B 41 941 144 HOH HOH . I 4 HOH B 42 942 219 HOH HOH . I 4 HOH B 43 943 53 HOH HOH . I 4 HOH B 44 944 214 HOH HOH . I 4 HOH B 45 945 115 HOH HOH . I 4 HOH B 46 946 281 HOH HOH . I 4 HOH B 47 947 235 HOH HOH . I 4 HOH B 48 948 218 HOH HOH . I 4 HOH B 49 949 37 HOH HOH . I 4 HOH B 50 950 240 HOH HOH . I 4 HOH B 51 951 118 HOH HOH . I 4 HOH B 52 952 174 HOH HOH . I 4 HOH B 53 953 29 HOH HOH . I 4 HOH B 54 954 282 HOH HOH . I 4 HOH B 55 955 71 HOH HOH . I 4 HOH B 56 956 179 HOH HOH . I 4 HOH B 57 957 112 HOH HOH . I 4 HOH B 58 958 180 HOH HOH . I 4 HOH B 59 959 207 HOH HOH . I 4 HOH B 60 960 42 HOH HOH . I 4 HOH B 61 961 202 HOH HOH . I 4 HOH B 62 962 12 HOH HOH . I 4 HOH B 63 963 60 HOH HOH . I 4 HOH B 64 964 184 HOH HOH . I 4 HOH B 65 965 86 HOH HOH . I 4 HOH B 66 966 229 HOH HOH . I 4 HOH B 67 967 233 HOH HOH . I 4 HOH B 68 968 106 HOH HOH . I 4 HOH B 69 969 15 HOH HOH . I 4 HOH B 70 970 217 HOH HOH . I 4 HOH B 71 971 127 HOH HOH . I 4 HOH B 72 972 101 HOH HOH . I 4 HOH B 73 973 164 HOH HOH . I 4 HOH B 74 974 67 HOH HOH . I 4 HOH B 75 975 225 HOH HOH . I 4 HOH B 76 976 168 HOH HOH . I 4 HOH B 77 977 241 HOH HOH . I 4 HOH B 78 978 231 HOH HOH . I 4 HOH B 79 979 123 HOH HOH . I 4 HOH B 80 980 8 HOH HOH . I 4 HOH B 81 981 74 HOH HOH . I 4 HOH B 82 982 25 HOH HOH . I 4 HOH B 83 983 145 HOH HOH . I 4 HOH B 84 984 93 HOH HOH . I 4 HOH B 85 985 2 HOH HOH . I 4 HOH B 86 986 268 HOH HOH . I 4 HOH B 87 987 124 HOH HOH . I 4 HOH B 88 988 186 HOH HOH . I 4 HOH B 89 989 167 HOH HOH . I 4 HOH B 90 990 105 HOH HOH . I 4 HOH B 91 991 55 HOH HOH . I 4 HOH B 92 992 254 HOH HOH . I 4 HOH B 93 993 94 HOH HOH . I 4 HOH B 94 994 100 HOH HOH . I 4 HOH B 95 995 222 HOH HOH . I 4 HOH B 96 996 116 HOH HOH . I 4 HOH B 97 997 183 HOH HOH . I 4 HOH B 98 998 157 HOH HOH . I 4 HOH B 99 999 271 HOH HOH . I 4 HOH B 100 1000 260 HOH HOH . I 4 HOH B 101 1001 119 HOH HOH . I 4 HOH B 102 1002 185 HOH HOH . I 4 HOH B 103 1003 23 HOH HOH . I 4 HOH B 104 1004 258 HOH HOH . I 4 HOH B 105 1005 215 HOH HOH . I 4 HOH B 106 1006 257 HOH HOH . I 4 HOH B 107 1007 82 HOH HOH . I 4 HOH B 108 1008 252 HOH HOH . I 4 HOH B 109 1009 151 HOH HOH . I 4 HOH B 110 1010 97 HOH HOH . I 4 HOH B 111 1011 234 HOH HOH . I 4 HOH B 112 1012 269 HOH HOH . I 4 HOH B 113 1013 58 HOH HOH . I 4 HOH B 114 1014 270 HOH HOH . I 4 HOH B 115 1015 62 HOH HOH . I 4 HOH B 116 1016 267 HOH HOH . I 4 HOH B 117 1017 236 HOH HOH . I 4 HOH B 118 1018 199 HOH HOH . I 4 HOH B 119 1019 137 HOH HOH . I 4 HOH B 120 1020 149 HOH HOH . I 4 HOH B 121 1021 245 HOH HOH . I 4 HOH B 122 1022 230 HOH HOH . I 4 HOH B 123 1023 88 HOH HOH . I 4 HOH B 124 1024 266 HOH HOH . I 4 HOH B 125 1025 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NT7 . B . F 2 7.564 13.187 10.98 0.3 27.88 ? N1 NT7 801 B 1 HETATM 2 C C4 NT7 . B . F 2 6.29 9.732 11.298 0.3 26.08 ? C4 NT7 801 B 1 HETATM 3 C C5 NT7 . B . F 2 7.112 10.835 11.395 0.3 26.41 ? C5 NT7 801 B 1 HETATM 4 C C6 NT7 . B . F 2 6.756 12.032 10.782 0.3 26.8 ? C6 NT7 801 B 1 HETATM 5 C C7 NT7 . B . F 2 7.89 13.639 12.21 0.3 28.99 ? C7 NT7 801 B 1 HETATM 6 C C8 NT7 . B . F 2 9.058 14.609 12.279 0.3 30.1 ? C8 NT7 801 B 1 HETATM 7 C C10 NT7 . B . F 2 8.405 16.538 14.811 0.3 31.96 ? C10 NT7 801 B 1 HETATM 8 C C13 NT7 . B . F 2 5.496 12.173 10.186 0.3 25.97 ? C13 NT7 801 B 1 HETATM 9 C C1 NT7 . B . F 2 3.29 11.121 9.482 0.3 25.59 ? C1 NT7 801 B 1 HETATM 10 C C11 NT7 . B . F 2 10.539 16.748 13.852 0.3 32.03 ? C11 NT7 801 B 1 HETATM 11 C C12 NT7 . B . F 2 9.849 16.887 12.515 0.3 31.62 ? C12 NT7 801 B 1 HETATM 12 C C14 NT7 . B . F 2 5.067 13.481 9.576 0.3 25.63 ? C14 NT7 801 B 1 HETATM 13 C C2 NT7 . B . F 2 4.653 11.045 10.116 0.3 25.73 ? C2 NT7 801 B 1 HETATM 14 C C3 NT7 . B . F 2 5.073 9.844 10.667 0.3 25.89 ? C3 NT7 801 B 1 HETATM 15 C C9 NT7 . B . F 2 7.717 16.254 13.496 0.3 31.51 ? C9 NT7 801 B 1 HETATM 16 N N2 NT7 . B . F 2 8.675 16.008 12.402 0.3 31.09 ? N2 NT7 801 B 1 HETATM 17 O O1 NT7 . B . F 2 7.348 13.244 13.229 0.3 29.01 ? O1 NT7 801 B 1 HETATM 18 O O2 NT7 . B . F 2 9.747 16.067 14.821 0.3 32.24 ? O2 NT7 801 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #