data_5SDM # _model_server_result.job_id 81UmQFpNsfRBJ8Nt6uXrmQ _model_server_result.datetime_utc '2024-11-22 23:40:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sdm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 5SDM # _exptl.entry_id 5SDM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SDM _cell.length_a 101.009 _cell.length_b 117.089 _cell.length_c 147.927 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SDM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 49 A CYS 69 1_555 A SG CYS 66 A CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 B SG CYS 49 B CYS 69 1_555 B SG CYS 66 B CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SDM _atom_sites.fract_transf_matrix[1][1] 0.0099 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00676 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 I8A A 1 801 801 I8A LIG . D 3 CL A 1 802 1 CL CL . E 3 CL A 1 803 2 CL CL . F 2 I8A B 1 801 801 I8A LIG . G 3 CL B 1 802 3 CL CL . H 4 HOH A 1 901 156 HOH HOH . H 4 HOH A 2 902 264 HOH HOH . H 4 HOH A 3 903 284 HOH HOH . H 4 HOH A 4 904 197 HOH HOH . H 4 HOH A 5 905 20 HOH HOH . H 4 HOH A 6 906 61 HOH HOH . H 4 HOH A 7 907 152 HOH HOH . H 4 HOH A 8 908 247 HOH HOH . H 4 HOH A 9 909 204 HOH HOH . H 4 HOH A 10 910 277 HOH HOH . H 4 HOH A 11 911 81 HOH HOH . H 4 HOH A 12 912 198 HOH HOH . H 4 HOH A 13 913 3 HOH HOH . H 4 HOH A 14 914 72 HOH HOH . H 4 HOH A 15 915 10 HOH HOH . H 4 HOH A 16 916 18 HOH HOH . H 4 HOH A 17 917 52 HOH HOH . H 4 HOH A 18 918 192 HOH HOH . H 4 HOH A 19 919 280 HOH HOH . H 4 HOH A 20 920 201 HOH HOH . H 4 HOH A 21 921 32 HOH HOH . H 4 HOH A 22 922 120 HOH HOH . H 4 HOH A 23 923 59 HOH HOH . H 4 HOH A 24 924 131 HOH HOH . H 4 HOH A 25 925 6 HOH HOH . H 4 HOH A 26 926 188 HOH HOH . H 4 HOH A 27 927 158 HOH HOH . H 4 HOH A 28 928 56 HOH HOH . H 4 HOH A 29 929 46 HOH HOH . H 4 HOH A 30 930 9 HOH HOH . H 4 HOH A 31 931 91 HOH HOH . H 4 HOH A 32 932 104 HOH HOH . H 4 HOH A 33 933 244 HOH HOH . H 4 HOH A 34 934 63 HOH HOH . H 4 HOH A 35 935 64 HOH HOH . H 4 HOH A 36 936 83 HOH HOH . H 4 HOH A 37 937 47 HOH HOH . H 4 HOH A 38 938 139 HOH HOH . H 4 HOH A 39 939 54 HOH HOH . H 4 HOH A 40 940 227 HOH HOH . H 4 HOH A 41 941 150 HOH HOH . H 4 HOH A 42 942 169 HOH HOH . H 4 HOH A 43 943 265 HOH HOH . H 4 HOH A 44 944 163 HOH HOH . H 4 HOH A 45 945 35 HOH HOH . H 4 HOH A 46 946 191 HOH HOH . H 4 HOH A 47 947 107 HOH HOH . H 4 HOH A 48 948 263 HOH HOH . H 4 HOH A 49 949 203 HOH HOH . H 4 HOH A 50 950 220 HOH HOH . H 4 HOH A 51 951 114 HOH HOH . H 4 HOH A 52 952 14 HOH HOH . H 4 HOH A 53 953 43 HOH HOH . H 4 HOH A 54 954 103 HOH HOH . H 4 HOH A 55 955 98 HOH HOH . H 4 HOH A 56 956 251 HOH HOH . H 4 HOH A 57 957 140 HOH HOH . H 4 HOH A 58 958 224 HOH HOH . H 4 HOH A 59 959 161 HOH HOH . H 4 HOH A 60 960 80 HOH HOH . H 4 HOH A 61 961 19 HOH HOH . H 4 HOH A 62 962 194 HOH HOH . H 4 HOH A 63 963 255 HOH HOH . H 4 HOH A 64 964 206 HOH HOH . H 4 HOH A 65 965 162 HOH HOH . H 4 HOH A 66 966 7 HOH HOH . H 4 HOH A 67 967 77 HOH HOH . H 4 HOH A 68 968 172 HOH HOH . H 4 HOH A 69 969 89 HOH HOH . H 4 HOH A 70 970 122 HOH HOH . H 4 HOH A 71 971 212 HOH HOH . H 4 HOH A 72 972 28 HOH HOH . H 4 HOH A 73 973 273 HOH HOH . H 4 HOH A 74 974 239 HOH HOH . H 4 HOH A 75 975 226 HOH HOH . H 4 HOH A 76 976 248 HOH HOH . H 4 HOH A 77 977 213 HOH HOH . H 4 HOH A 78 978 195 HOH HOH . H 4 HOH A 79 979 208 HOH HOH . H 4 HOH A 80 980 136 HOH HOH . H 4 HOH A 81 981 278 HOH HOH . H 4 HOH A 82 982 132 HOH HOH . H 4 HOH A 83 983 178 HOH HOH . H 4 HOH A 84 984 153 HOH HOH . H 4 HOH A 85 985 95 HOH HOH . H 4 HOH A 86 986 26 HOH HOH . H 4 HOH A 87 987 130 HOH HOH . H 4 HOH A 88 988 232 HOH HOH . H 4 HOH A 89 989 113 HOH HOH . H 4 HOH A 90 990 262 HOH HOH . H 4 HOH A 91 991 34 HOH HOH . H 4 HOH A 92 992 141 HOH HOH . H 4 HOH A 93 993 196 HOH HOH . H 4 HOH A 94 994 216 HOH HOH . H 4 HOH A 95 995 13 HOH HOH . H 4 HOH A 96 996 261 HOH HOH . H 4 HOH A 97 997 159 HOH HOH . H 4 HOH A 98 998 155 HOH HOH . H 4 HOH A 99 999 108 HOH HOH . H 4 HOH A 100 1000 109 HOH HOH . H 4 HOH A 101 1001 205 HOH HOH . H 4 HOH A 102 1002 69 HOH HOH . H 4 HOH A 103 1003 102 HOH HOH . H 4 HOH A 104 1004 242 HOH HOH . H 4 HOH A 105 1005 40 HOH HOH . H 4 HOH A 106 1006 44 HOH HOH . H 4 HOH A 107 1007 126 HOH HOH . H 4 HOH A 108 1008 200 HOH HOH . H 4 HOH A 109 1009 274 HOH HOH . H 4 HOH A 110 1010 111 HOH HOH . H 4 HOH A 111 1011 5 HOH HOH . H 4 HOH A 112 1012 27 HOH HOH . H 4 HOH A 113 1013 128 HOH HOH . H 4 HOH A 114 1014 50 HOH HOH . H 4 HOH A 115 1015 250 HOH HOH . H 4 HOH A 116 1016 36 HOH HOH . H 4 HOH A 117 1017 275 HOH HOH . H 4 HOH A 118 1018 57 HOH HOH . H 4 HOH A 119 1019 187 HOH HOH . H 4 HOH A 120 1020 177 HOH HOH . H 4 HOH A 121 1021 234 HOH HOH . H 4 HOH A 122 1022 117 HOH HOH . H 4 HOH A 123 1023 41 HOH HOH . H 4 HOH A 124 1024 189 HOH HOH . H 4 HOH A 125 1025 276 HOH HOH . H 4 HOH A 126 1026 246 HOH HOH . H 4 HOH A 127 1027 253 HOH HOH . H 4 HOH A 128 1028 173 HOH HOH . H 4 HOH A 129 1029 45 HOH HOH . H 4 HOH A 130 1030 110 HOH HOH . H 4 HOH A 131 1031 165 HOH HOH . H 4 HOH A 132 1032 181 HOH HOH . H 4 HOH A 133 1033 135 HOH HOH . H 4 HOH A 134 1034 209 HOH HOH . H 4 HOH A 135 1035 221 HOH HOH . H 4 HOH A 136 1036 87 HOH HOH . H 4 HOH A 137 1037 237 HOH HOH . H 4 HOH A 138 1038 249 HOH HOH . H 4 HOH A 139 1039 4 HOH HOH . H 4 HOH A 140 1040 243 HOH HOH . I 4 HOH B 1 901 84 HOH HOH . I 4 HOH B 2 902 22 HOH HOH . I 4 HOH B 3 903 99 HOH HOH . I 4 HOH B 4 904 147 HOH HOH . I 4 HOH B 5 905 143 HOH HOH . I 4 HOH B 6 906 148 HOH HOH . I 4 HOH B 7 907 31 HOH HOH . I 4 HOH B 8 908 51 HOH HOH . I 4 HOH B 9 909 79 HOH HOH . I 4 HOH B 10 910 182 HOH HOH . I 4 HOH B 11 911 78 HOH HOH . I 4 HOH B 12 912 86 HOH HOH . I 4 HOH B 13 913 190 HOH HOH . I 4 HOH B 14 914 259 HOH HOH . I 4 HOH B 15 915 214 HOH HOH . I 4 HOH B 16 916 39 HOH HOH . I 4 HOH B 17 917 211 HOH HOH . I 4 HOH B 18 918 115 HOH HOH . I 4 HOH B 19 919 134 HOH HOH . I 4 HOH B 20 920 235 HOH HOH . I 4 HOH B 21 921 118 HOH HOH . I 4 HOH B 22 922 223 HOH HOH . I 4 HOH B 23 923 228 HOH HOH . I 4 HOH B 24 924 8 HOH HOH . I 4 HOH B 25 925 272 HOH HOH . I 4 HOH B 26 926 154 HOH HOH . I 4 HOH B 27 927 202 HOH HOH . I 4 HOH B 28 928 65 HOH HOH . I 4 HOH B 29 929 11 HOH HOH . I 4 HOH B 30 930 281 HOH HOH . I 4 HOH B 31 931 219 HOH HOH . I 4 HOH B 32 932 70 HOH HOH . I 4 HOH B 33 933 229 HOH HOH . I 4 HOH B 34 934 231 HOH HOH . I 4 HOH B 35 935 225 HOH HOH . I 4 HOH B 36 936 48 HOH HOH . I 4 HOH B 37 937 176 HOH HOH . I 4 HOH B 38 938 210 HOH HOH . I 4 HOH B 39 939 49 HOH HOH . I 4 HOH B 40 940 62 HOH HOH . I 4 HOH B 41 941 121 HOH HOH . I 4 HOH B 42 942 101 HOH HOH . I 4 HOH B 43 943 85 HOH HOH . I 4 HOH B 44 944 60 HOH HOH . I 4 HOH B 45 945 16 HOH HOH . I 4 HOH B 46 946 1 HOH HOH . I 4 HOH B 47 947 144 HOH HOH . I 4 HOH B 48 948 21 HOH HOH . I 4 HOH B 49 949 241 HOH HOH . I 4 HOH B 50 950 146 HOH HOH . I 4 HOH B 51 951 2 HOH HOH . I 4 HOH B 52 952 170 HOH HOH . I 4 HOH B 53 953 193 HOH HOH . I 4 HOH B 54 954 106 HOH HOH . I 4 HOH B 55 955 240 HOH HOH . I 4 HOH B 56 956 282 HOH HOH . I 4 HOH B 57 957 175 HOH HOH . I 4 HOH B 58 958 207 HOH HOH . I 4 HOH B 59 959 71 HOH HOH . I 4 HOH B 60 960 233 HOH HOH . I 4 HOH B 61 961 29 HOH HOH . I 4 HOH B 62 962 42 HOH HOH . I 4 HOH B 63 963 12 HOH HOH . I 4 HOH B 64 964 37 HOH HOH . I 4 HOH B 65 965 76 HOH HOH . I 4 HOH B 66 966 217 HOH HOH . I 4 HOH B 67 967 179 HOH HOH . I 4 HOH B 68 968 53 HOH HOH . I 4 HOH B 69 969 123 HOH HOH . I 4 HOH B 70 970 184 HOH HOH . I 4 HOH B 71 971 15 HOH HOH . I 4 HOH B 72 972 164 HOH HOH . I 4 HOH B 73 973 218 HOH HOH . I 4 HOH B 74 974 168 HOH HOH . I 4 HOH B 75 975 157 HOH HOH . I 4 HOH B 76 976 167 HOH HOH . I 4 HOH B 77 977 74 HOH HOH . I 4 HOH B 78 978 127 HOH HOH . I 4 HOH B 79 979 180 HOH HOH . I 4 HOH B 80 980 145 HOH HOH . I 4 HOH B 81 981 105 HOH HOH . I 4 HOH B 82 982 96 HOH HOH . I 4 HOH B 83 983 112 HOH HOH . I 4 HOH B 84 984 268 HOH HOH . I 4 HOH B 85 985 25 HOH HOH . I 4 HOH B 86 986 283 HOH HOH . I 4 HOH B 87 987 186 HOH HOH . I 4 HOH B 88 988 30 HOH HOH . I 4 HOH B 89 989 124 HOH HOH . I 4 HOH B 90 990 257 HOH HOH . I 4 HOH B 91 991 174 HOH HOH . I 4 HOH B 92 992 55 HOH HOH . I 4 HOH B 93 993 94 HOH HOH . I 4 HOH B 94 994 93 HOH HOH . I 4 HOH B 95 995 67 HOH HOH . I 4 HOH B 96 996 252 HOH HOH . I 4 HOH B 97 997 100 HOH HOH . I 4 HOH B 98 998 271 HOH HOH . I 4 HOH B 99 999 260 HOH HOH . I 4 HOH B 100 1000 119 HOH HOH . I 4 HOH B 101 1001 23 HOH HOH . I 4 HOH B 102 1002 222 HOH HOH . I 4 HOH B 103 1003 258 HOH HOH . I 4 HOH B 104 1004 116 HOH HOH . I 4 HOH B 105 1005 254 HOH HOH . I 4 HOH B 106 1006 183 HOH HOH . I 4 HOH B 107 1007 215 HOH HOH . I 4 HOH B 108 1008 97 HOH HOH . I 4 HOH B 109 1009 82 HOH HOH . I 4 HOH B 110 1010 269 HOH HOH . I 4 HOH B 111 1011 58 HOH HOH . I 4 HOH B 112 1012 151 HOH HOH . I 4 HOH B 113 1013 185 HOH HOH . I 4 HOH B 114 1014 270 HOH HOH . I 4 HOH B 115 1015 267 HOH HOH . I 4 HOH B 116 1016 160 HOH HOH . I 4 HOH B 117 1017 279 HOH HOH . I 4 HOH B 118 1018 236 HOH HOH . I 4 HOH B 119 1019 199 HOH HOH . I 4 HOH B 120 1020 149 HOH HOH . I 4 HOH B 121 1021 137 HOH HOH . I 4 HOH B 122 1022 245 HOH HOH . I 4 HOH B 123 1023 230 HOH HOH . I 4 HOH B 124 1024 256 HOH HOH . I 4 HOH B 125 1025 88 HOH HOH . I 4 HOH B 126 1026 266 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 29.09 _atom_site.Cartn_y 56.349 _atom_site.Cartn_z 47.43 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 75.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #