data_5SDY
#
_model_server_result.job_id            ggY5xnNnxKPvdx9sI4Ms6w 
_model_server_result.datetime_utc      '2024-11-22 22:01:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5sdy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":801}' 
#
_entry.id    5SDY 
#
_exptl.entry_id    5SDY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5SDY 
_cell.length_a            141.546 
_cell.length_b            141.546 
_cell.length_c            141.546 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5SDY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 3' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 52 A CYS 498 1_555 A SG CYS 56 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
covale ? covale1 A C LEU 62 A LEU 508 1_555 A N CME 63 A CME 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C CME 63 A CME 509 1_555 A N ARG 64 A ARG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
metalc ? metalc1 A NE2 HIS 83 A HIS 529 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc2 A NE2 HIS 117 A HIS 563 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc3 A OD2 ASP 118 A ASP 564 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc4 A OD1 ASP 118 A ASP 564 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc5 A OD1 ASP 228 A ASP 674 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc6 B ZN ZN . A ZN 801 1_555 E O HOH . A HOH 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc7 C MG MG . A MG 802 1_555 E O HOH . A HOH 942 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc8 C MG MG . A MG 802 1_555 E O HOH . A HOH 944 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? 
metalc ? metalc9 C MG MG . A MG 802 1_555 E O HOH . A HOH 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
metalc ? metalc10 C MG MG . A MG 802 1_555 E O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? 
metalc ? metalc11 C MG MG . A MG 802 1_555 E O HOH . A HOH 1052 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5SDY 
_atom_sites.fract_transf_matrix[1][1]    0.007065 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007065 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007065 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 801 1 ZN ZN . 
C 3 MG A 1 802 1 MG MG . 
D 4 IB4 A 1 803 1 IB4 L0R . 
E 5 HOH A 1 901 119 HOH HOH . 
E 5 HOH A 2 902 164 HOH HOH . 
E 5 HOH A 3 903 172 HOH HOH . 
E 5 HOH A 4 904 85 HOH HOH . 
E 5 HOH A 5 905 117 HOH HOH . 
E 5 HOH A 6 906 123 HOH HOH . 
E 5 HOH A 7 907 69 HOH HOH . 
E 5 HOH A 8 908 162 HOH HOH . 
E 5 HOH A 9 909 200 HOH HOH . 
E 5 HOH A 10 910 134 HOH HOH . 
E 5 HOH A 11 911 39 HOH HOH . 
E 5 HOH A 12 912 61 HOH HOH . 
E 5 HOH A 13 913 150 HOH HOH . 
E 5 HOH A 14 914 80 HOH HOH . 
E 5 HOH A 15 915 43 HOH HOH . 
E 5 HOH A 16 916 109 HOH HOH . 
E 5 HOH A 17 917 136 HOH HOH . 
E 5 HOH A 18 918 48 HOH HOH . 
E 5 HOH A 19 919 95 HOH HOH . 
E 5 HOH A 20 920 90 HOH HOH . 
E 5 HOH A 21 921 141 HOH HOH . 
E 5 HOH A 22 922 46 HOH HOH . 
E 5 HOH A 23 923 181 HOH HOH . 
E 5 HOH A 24 924 211 HOH HOH . 
E 5 HOH A 25 925 52 HOH HOH . 
E 5 HOH A 26 926 196 HOH HOH . 
E 5 HOH A 27 927 189 HOH HOH . 
E 5 HOH A 28 928 158 HOH HOH . 
E 5 HOH A 29 929 128 HOH HOH . 
E 5 HOH A 30 930 137 HOH HOH . 
E 5 HOH A 31 931 10 HOH HOH . 
E 5 HOH A 32 932 16 HOH HOH . 
E 5 HOH A 33 933 116 HOH HOH . 
E 5 HOH A 34 934 23 HOH HOH . 
E 5 HOH A 35 935 7 HOH HOH . 
E 5 HOH A 36 936 12 HOH HOH . 
E 5 HOH A 37 937 62 HOH HOH . 
E 5 HOH A 38 938 6 HOH HOH . 
E 5 HOH A 39 939 152 HOH HOH . 
E 5 HOH A 40 940 55 HOH HOH . 
E 5 HOH A 41 941 33 HOH HOH . 
E 5 HOH A 42 942 4 HOH HOH . 
E 5 HOH A 43 943 28 HOH HOH . 
E 5 HOH A 44 944 5 HOH HOH . 
E 5 HOH A 45 945 36 HOH HOH . 
E 5 HOH A 46 946 133 HOH HOH . 
E 5 HOH A 47 947 45 HOH HOH . 
E 5 HOH A 48 948 77 HOH HOH . 
E 5 HOH A 49 949 198 HOH HOH . 
E 5 HOH A 50 950 195 HOH HOH . 
E 5 HOH A 51 951 63 HOH HOH . 
E 5 HOH A 52 952 54 HOH HOH . 
E 5 HOH A 53 953 50 HOH HOH . 
E 5 HOH A 54 954 49 HOH HOH . 
E 5 HOH A 55 955 74 HOH HOH . 
E 5 HOH A 56 956 149 HOH HOH . 
E 5 HOH A 57 957 20 HOH HOH . 
E 5 HOH A 58 958 67 HOH HOH . 
E 5 HOH A 59 959 8 HOH HOH . 
E 5 HOH A 60 960 84 HOH HOH . 
E 5 HOH A 61 961 192 HOH HOH . 
E 5 HOH A 62 962 11 HOH HOH . 
E 5 HOH A 63 963 171 HOH HOH . 
E 5 HOH A 64 964 65 HOH HOH . 
E 5 HOH A 65 965 91 HOH HOH . 
E 5 HOH A 66 966 27 HOH HOH . 
E 5 HOH A 67 967 135 HOH HOH . 
E 5 HOH A 68 968 42 HOH HOH . 
E 5 HOH A 69 969 203 HOH HOH . 
E 5 HOH A 70 970 104 HOH HOH . 
E 5 HOH A 71 971 72 HOH HOH . 
E 5 HOH A 72 972 112 HOH HOH . 
E 5 HOH A 73 973 57 HOH HOH . 
E 5 HOH A 74 974 213 HOH HOH . 
E 5 HOH A 75 975 82 HOH HOH . 
E 5 HOH A 76 976 9 HOH HOH . 
E 5 HOH A 77 977 31 HOH HOH . 
E 5 HOH A 78 978 70 HOH HOH . 
E 5 HOH A 79 979 161 HOH HOH . 
E 5 HOH A 80 980 24 HOH HOH . 
E 5 HOH A 81 981 163 HOH HOH . 
E 5 HOH A 82 982 131 HOH HOH . 
E 5 HOH A 83 983 159 HOH HOH . 
E 5 HOH A 84 984 51 HOH HOH . 
E 5 HOH A 85 985 120 HOH HOH . 
E 5 HOH A 86 986 99 HOH HOH . 
E 5 HOH A 87 987 199 HOH HOH . 
E 5 HOH A 88 988 97 HOH HOH . 
E 5 HOH A 89 989 37 HOH HOH . 
E 5 HOH A 90 990 30 HOH HOH . 
E 5 HOH A 91 991 132 HOH HOH . 
E 5 HOH A 92 992 114 HOH HOH . 
E 5 HOH A 93 993 26 HOH HOH . 
E 5 HOH A 94 994 115 HOH HOH . 
E 5 HOH A 95 995 153 HOH HOH . 
E 5 HOH A 96 996 1 HOH HOH . 
E 5 HOH A 97 997 59 HOH HOH . 
E 5 HOH A 98 998 156 HOH HOH . 
E 5 HOH A 99 999 38 HOH HOH . 
E 5 HOH A 100 1000 32 HOH HOH . 
E 5 HOH A 101 1001 53 HOH HOH . 
E 5 HOH A 102 1002 110 HOH HOH . 
E 5 HOH A 103 1003 214 HOH HOH . 
E 5 HOH A 104 1004 44 HOH HOH . 
E 5 HOH A 105 1005 25 HOH HOH . 
E 5 HOH A 106 1006 2 HOH HOH . 
E 5 HOH A 107 1007 14 HOH HOH . 
E 5 HOH A 108 1008 19 HOH HOH . 
E 5 HOH A 109 1009 56 HOH HOH . 
E 5 HOH A 110 1010 122 HOH HOH . 
E 5 HOH A 111 1011 58 HOH HOH . 
E 5 HOH A 112 1012 113 HOH HOH . 
E 5 HOH A 113 1013 146 HOH HOH . 
E 5 HOH A 114 1014 18 HOH HOH . 
E 5 HOH A 115 1015 88 HOH HOH . 
E 5 HOH A 116 1016 41 HOH HOH . 
E 5 HOH A 117 1017 22 HOH HOH . 
E 5 HOH A 118 1018 60 HOH HOH . 
E 5 HOH A 119 1019 197 HOH HOH . 
E 5 HOH A 120 1020 79 HOH HOH . 
E 5 HOH A 121 1021 177 HOH HOH . 
E 5 HOH A 122 1022 13 HOH HOH . 
E 5 HOH A 123 1023 15 HOH HOH . 
E 5 HOH A 124 1024 130 HOH HOH . 
E 5 HOH A 125 1025 98 HOH HOH . 
E 5 HOH A 126 1026 68 HOH HOH . 
E 5 HOH A 127 1027 143 HOH HOH . 
E 5 HOH A 128 1028 139 HOH HOH . 
E 5 HOH A 129 1029 17 HOH HOH . 
E 5 HOH A 130 1030 126 HOH HOH . 
E 5 HOH A 131 1031 108 HOH HOH . 
E 5 HOH A 132 1032 166 HOH HOH . 
E 5 HOH A 133 1033 106 HOH HOH . 
E 5 HOH A 134 1034 76 HOH HOH . 
E 5 HOH A 135 1035 47 HOH HOH . 
E 5 HOH A 136 1036 183 HOH HOH . 
E 5 HOH A 137 1037 92 HOH HOH . 
E 5 HOH A 138 1038 66 HOH HOH . 
E 5 HOH A 139 1039 64 HOH HOH . 
E 5 HOH A 140 1040 29 HOH HOH . 
E 5 HOH A 141 1041 118 HOH HOH . 
E 5 HOH A 142 1042 107 HOH HOH . 
E 5 HOH A 143 1043 86 HOH HOH . 
E 5 HOH A 144 1044 157 HOH HOH . 
E 5 HOH A 145 1045 201 HOH HOH . 
E 5 HOH A 146 1046 87 HOH HOH . 
E 5 HOH A 147 1047 212 HOH HOH . 
E 5 HOH A 148 1048 142 HOH HOH . 
E 5 HOH A 149 1049 190 HOH HOH . 
E 5 HOH A 150 1050 34 HOH HOH . 
E 5 HOH A 151 1051 96 HOH HOH . 
E 5 HOH A 152 1052 3 HOH HOH . 
E 5 HOH A 153 1053 175 HOH HOH . 
E 5 HOH A 154 1054 124 HOH HOH . 
E 5 HOH A 155 1055 129 HOH HOH . 
E 5 HOH A 156 1056 186 HOH HOH . 
E 5 HOH A 157 1057 140 HOH HOH . 
E 5 HOH A 158 1058 111 HOH HOH . 
E 5 HOH A 159 1059 71 HOH HOH . 
E 5 HOH A 160 1060 125 HOH HOH . 
E 5 HOH A 161 1061 188 HOH HOH . 
E 5 HOH A 162 1062 21 HOH HOH . 
E 5 HOH A 163 1063 138 HOH HOH . 
E 5 HOH A 164 1064 35 HOH HOH . 
E 5 HOH A 165 1065 154 HOH HOH . 
E 5 HOH A 166 1066 160 HOH HOH . 
E 5 HOH A 167 1067 173 HOH HOH . 
E 5 HOH A 168 1068 155 HOH HOH . 
E 5 HOH A 169 1069 206 HOH HOH . 
E 5 HOH A 170 1070 78 HOH HOH . 
E 5 HOH A 171 1071 147 HOH HOH . 
E 5 HOH A 172 1072 127 HOH HOH . 
E 5 HOH A 173 1073 148 HOH HOH . 
E 5 HOH A 174 1074 103 HOH HOH . 
E 5 HOH A 175 1075 89 HOH HOH . 
E 5 HOH A 176 1076 202 HOH HOH . 
E 5 HOH A 177 1077 145 HOH HOH . 
E 5 HOH A 178 1078 81 HOH HOH . 
E 5 HOH A 179 1079 165 HOH HOH . 
E 5 HOH A 180 1080 208 HOH HOH . 
E 5 HOH A 181 1081 75 HOH HOH . 
E 5 HOH A 182 1082 205 HOH HOH . 
E 5 HOH A 183 1083 191 HOH HOH . 
E 5 HOH A 184 1084 94 HOH HOH . 
E 5 HOH A 185 1085 105 HOH HOH . 
E 5 HOH A 186 1086 83 HOH HOH . 
E 5 HOH A 187 1087 180 HOH HOH . 
E 5 HOH A 188 1088 144 HOH HOH . 
E 5 HOH A 189 1089 176 HOH HOH . 
E 5 HOH A 190 1090 170 HOH HOH . 
E 5 HOH A 191 1091 151 HOH HOH . 
E 5 HOH A 192 1092 93 HOH HOH . 
E 5 HOH A 193 1093 187 HOH HOH . 
E 5 HOH A 194 1094 207 HOH HOH . 
E 5 HOH A 195 1095 209 HOH HOH . 
E 5 HOH A 196 1096 167 HOH HOH . 
E 5 HOH A 197 1097 210 HOH HOH . 
E 5 HOH A 198 1098 168 HOH HOH . 
E 5 HOH A 199 1099 184 HOH HOH . 
E 5 HOH A 200 1100 101 HOH HOH . 
E 5 HOH A 201 1101 40 HOH HOH . 
E 5 HOH A 202 1102 100 HOH HOH . 
E 5 HOH A 203 1103 204 HOH HOH . 
E 5 HOH A 204 1104 179 HOH HOH . 
E 5 HOH A 205 1105 102 HOH HOH . 
E 5 HOH A 206 1106 169 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               108.451 
_atom_site.Cartn_y               136.305 
_atom_site.Cartn_z               29.788 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.36 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           801 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#