data_5SET # _model_server_result.job_id N47BvjrOzJwxng0bszSB8w _model_server_result.datetime_utc '2024-12-23 05:20:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5set # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 5SET # _exptl.entry_id 5SET _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 412.447 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-cyclopropyl-N-[1-methyl-3-(pyridin-2-yl)-1H-pyrazol-5-yl]-3-[(pyrimidin-5-yl)amino]pyridine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SET _cell.length_a 141.484 _cell.length_b 141.484 _cell.length_c 141.484 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SET _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 498 1_555 A SG CYS 56 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? covale ? covale1 A C LEU 62 A LEU 508 1_555 A N CME 63 A CME 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale2 A C CME 63 A CME 509 1_555 A N ARG 64 A ARG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? metalc ? metalc1 A NE2 HIS 83 A HIS 529 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc2 A NE2 HIS 117 A HIS 563 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc3 A OD2 ASP 118 A ASP 564 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc4 A OD1 ASP 118 A ASP 564 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc5 A OD1 ASP 228 A ASP 674 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc6 B ZN ZN . A ZN 801 1_555 E O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc7 C MG MG . A MG 802 1_555 E O HOH . A HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc8 C MG MG . A MG 802 1_555 E O HOH . A HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc9 C MG MG . A MG 802 1_555 E O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc10 C MG MG . A MG 802 1_555 E O HOH . A HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? metalc ? metalc11 C MG MG . A MG 802 1_555 E O HOH . A HOH 932 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'C22 H20 N8 O' _chem_comp.formula_weight 412.447 _chem_comp.id IH8 _chem_comp.mon_nstd_flag . _chem_comp.name 6-cyclopropyl-N-[1-methyl-3-(pyridin-2-yl)-1H-pyrazol-5-yl]-3-[(pyrimidin-5-yl)amino]pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N9 IH8 sing 173 n n C1 N6 IH8 sing 174 n y C1 C4 IH8 doub 175 n y C2 C10 IH8 doub 176 n y C2 C8 IH8 sing 177 n n C2 N7 IH8 sing 178 n y N3 N6 IH8 sing 179 n y N3 C5 IH8 doub 180 n y C4 C5 IH8 sing 181 n y C5 C16 IH8 sing 182 n n N6 C25 IH8 sing 183 n n N7 C11 IH8 doub 184 n y C8 N9 IH8 sing 185 n n C8 O17 IH8 doub 186 n n C10 C21 IH8 sing 187 n y C10 N13 IH8 sing 188 n n C11 C12 IH8 sing 189 n n C11 C23 IH8 sing 190 n y C12 C14 IH8 sing 191 n n C12 C15 IH8 sing 192 n n N13 C22 IH8 sing 193 n n C14 C15 IH8 sing 194 n n C16 C29 IH8 doub 195 n y C16 N18 IH8 sing 196 n y N18 C28 IH8 doub 197 n y N19 C24 IH8 doub 198 n y N19 C27 IH8 sing 199 n y N20 C26 IH8 doub 200 n y N20 C24 IH8 sing 201 n y C21 C23 IH8 doub 202 n y C22 C27 IH8 doub 203 n y C22 C26 IH8 sing 204 n y C28 C30 IH8 sing 205 n y C29 C31 IH8 sing 206 n y C30 C31 IH8 doub 207 n y C15 H39 IH8 sing 208 n n C15 H38 IH8 sing 209 n n C21 H40 IH8 sing 210 n n C23 H41 IH8 sing 211 n n C24 H42 IH8 sing 212 n n C25 H44 IH8 sing 213 n n C25 H45 IH8 sing 214 n n C25 H43 IH8 sing 215 n n C26 H46 IH8 sing 216 n n C27 H47 IH8 sing 217 n n C28 H48 IH8 sing 218 n n C4 H32 IH8 sing 219 n n N9 H33 IH8 sing 220 n n C12 H34 IH8 sing 221 n n N13 H35 IH8 sing 222 n n C14 H36 IH8 sing 223 n n C14 H37 IH8 sing 224 n n C29 H49 IH8 sing 225 n n C30 H50 IH8 sing 226 n n C31 H51 IH8 sing 227 n n # _atom_sites.entry_id 5SET _atom_sites.fract_transf_matrix[1][1] 0.007068 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007068 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 801 1 ZN ZN . C 3 MG A 1 802 1 MG MG . D 4 IH8 A 1 803 1 IH8 L0R . E 5 HOH A 1 901 54 HOH HOH . E 5 HOH A 2 902 38 HOH HOH . E 5 HOH A 3 903 31 HOH HOH . E 5 HOH A 4 904 10 HOH HOH . E 5 HOH A 5 905 5 HOH HOH . E 5 HOH A 6 906 39 HOH HOH . E 5 HOH A 7 907 14 HOH HOH . E 5 HOH A 8 908 22 HOH HOH . E 5 HOH A 9 909 34 HOH HOH . E 5 HOH A 10 910 36 HOH HOH . E 5 HOH A 11 911 6 HOH HOH . E 5 HOH A 12 912 48 HOH HOH . E 5 HOH A 13 913 32 HOH HOH . E 5 HOH A 14 914 58 HOH HOH . E 5 HOH A 15 915 8 HOH HOH . E 5 HOH A 16 916 26 HOH HOH . E 5 HOH A 17 917 21 HOH HOH . E 5 HOH A 18 918 37 HOH HOH . E 5 HOH A 19 919 4 HOH HOH . E 5 HOH A 20 920 59 HOH HOH . E 5 HOH A 21 921 19 HOH HOH . E 5 HOH A 22 922 1 HOH HOH . E 5 HOH A 23 923 7 HOH HOH . E 5 HOH A 24 924 60 HOH HOH . E 5 HOH A 25 925 53 HOH HOH . E 5 HOH A 26 926 2 HOH HOH . E 5 HOH A 27 927 23 HOH HOH . E 5 HOH A 28 928 20 HOH HOH . E 5 HOH A 29 929 12 HOH HOH . E 5 HOH A 30 930 35 HOH HOH . E 5 HOH A 31 931 33 HOH HOH . E 5 HOH A 32 932 3 HOH HOH . E 5 HOH A 33 933 9 HOH HOH . E 5 HOH A 34 934 11 HOH HOH . E 5 HOH A 35 935 15 HOH HOH . E 5 HOH A 36 936 16 HOH HOH . E 5 HOH A 37 937 25 HOH HOH . E 5 HOH A 38 938 27 HOH HOH . E 5 HOH A 39 939 18 HOH HOH . E 5 HOH A 40 940 44 HOH HOH . E 5 HOH A 41 941 55 HOH HOH . E 5 HOH A 42 942 62 HOH HOH . E 5 HOH A 43 943 40 HOH HOH . E 5 HOH A 44 944 13 HOH HOH . E 5 HOH A 45 945 45 HOH HOH . E 5 HOH A 46 946 50 HOH HOH . E 5 HOH A 47 947 46 HOH HOH . E 5 HOH A 48 948 29 HOH HOH . E 5 HOH A 49 949 24 HOH HOH . E 5 HOH A 50 950 68 HOH HOH . E 5 HOH A 51 951 65 HOH HOH . E 5 HOH A 52 952 57 HOH HOH . E 5 HOH A 53 953 30 HOH HOH . E 5 HOH A 54 954 56 HOH HOH . E 5 HOH A 55 955 63 HOH HOH . E 5 HOH A 56 956 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 IH8 . . . D 4 102.612 129.98 35.48 1 82.45 ? C10 IH8 803 A 1 HETATM 2 C C11 IH8 . . . D 4 104.388 131.955 36.27 1 80.78 ? C11 IH8 803 A 1 HETATM 3 C C15 IH8 . . . D 4 106.756 132.775 37.104 1 85.07 ? C15 IH8 803 A 1 HETATM 4 C C16 IH8 . . . D 4 102.682 125.582 42.454 1 90.57 ? C16 IH8 803 A 1 HETATM 5 C C21 IH8 . . . D 4 103.027 130.966 34.57 1 85.86 ? C21 IH8 803 A 1 HETATM 6 C C22 IH8 . . . D 4 101.451 128.571 33.719 1 97.92 ? C22 IH8 803 A 1 HETATM 7 C C23 IH8 . . . D 4 103.924 131.947 34.96 1 80.08 ? C23 IH8 803 A 1 HETATM 8 C C24 IH8 . . . D 4 100.908 127.922 31.17 1 104.6 ? C24 IH8 803 A 1 HETATM 9 C C25 IH8 . . . D 4 102.714 130.422 41.975 1 83.87 ? C25 IH8 803 A 1 HETATM 10 C C26 IH8 . . . D 4 102.236 129.01 32.649 1 98.89 ? C26 IH8 803 A 1 HETATM 11 C C27 IH8 . . . D 4 100.365 127.766 33.361 1 96.13 ? C27 IH8 803 A 1 HETATM 12 C C28 IH8 . . . D 4 102.844 123.285 42.272 1 77.86 ? C28 IH8 803 A 1 HETATM 13 C C1 IH8 . . . D 4 103.019 128.517 40.284 1 80.66 ? C1 IH8 803 A 1 HETATM 14 C C2 IH8 . . . D 4 103.14 130.051 36.822 1 80.92 ? C2 IH8 803 A 1 HETATM 15 N N3 IH8 . . . D 4 102.616 128.027 42.458 1 90.07 ? N3 IH8 803 A 1 HETATM 16 C C4 IH8 . . . D 4 102.992 127.148 40.399 1 82.13 ? C4 IH8 803 A 1 HETATM 17 C C5 IH8 . . . D 4 102.716 126.884 41.763 1 89.24 ? C5 IH8 803 A 1 HETATM 18 N N6 IH8 . . . D 4 102.787 129.03 41.536 1 88.4 ? N6 IH8 803 A 1 HETATM 19 N N7 IH8 . . . D 4 103.999 131.037 37.184 1 79.72 ? N7 IH8 803 A 1 HETATM 20 C C8 IH8 . . . D 4 102.8 129.036 37.911 1 74.28 ? C8 IH8 803 A 1 HETATM 21 N N9 IH8 . . . D 4 103.23 129.369 39.176 1 74.54 ? N9 IH8 803 A 1 HETATM 22 C C12 IH8 . . . D 4 105.344 133.067 36.659 1 82.99 ? C12 IH8 803 A 1 HETATM 23 N N13 IH8 . . . D 4 101.732 128.947 35.071 1 86.53 ? N13 IH8 803 A 1 HETATM 24 C C14 IH8 . . . D 4 105.76 133.242 38.1 1 84.79 ? C14 IH8 803 A 1 HETATM 25 O O17 IH8 . . . D 4 102.218 127.983 37.663 1 74.36 ? O17 IH8 803 A 1 HETATM 26 N N18 IH8 . . . D 4 102.788 124.491 41.666 1 75.46 ? N18 IH8 803 A 1 HETATM 27 N N19 IH8 . . . D 4 100.075 127.436 32.091 1 87.94 ? N19 IH8 803 A 1 HETATM 28 N N20 IH8 . . . D 4 101.981 128.696 31.373 1 107.86 ? N20 IH8 803 A 1 HETATM 29 C C29 IH8 . . . D 4 102.681 125.497 43.852 1 77.18 ? C29 IH8 803 A 1 HETATM 30 C C30 IH8 . . . D 4 102.812 123.111 43.646 1 76.22 ? C30 IH8 803 A 1 HETATM 31 C C31 IH8 . . . D 4 102.728 124.239 44.44 1 79.15 ? C31 IH8 803 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #