data_5SHY # _model_server_result.job_id 7tXvSeQBAPZeNIjVVnIwQQ _model_server_result.datetime_utc '2024-10-11 02:21:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5shy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 5SHY # _exptl.entry_id 5SHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SHY _cell.length_a 142.08 _cell.length_b 142.08 _cell.length_c 142.08 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 498 1_555 A SG CYS 56 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? covale ? covale1 A C LEU 62 A LEU 508 1_555 A N CME 63 A CME 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale2 A C CME 63 A CME 509 1_555 A N ARG 64 A ARG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A NE2 HIS 83 A HIS 529 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc2 A NE2 HIS 117 A HIS 563 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc3 A OD2 ASP 118 A ASP 564 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc4 A OD1 ASP 118 A ASP 564 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc5 A OD1 ASP 228 A ASP 674 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc6 A OD2 ASP 228 A ASP 674 1_555 D K K . A K 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.396 ? metalc ? metalc7 B ZN ZN . A ZN 801 1_555 I O HOH . A HOH 933 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc8 C MG MG . A MG 802 1_555 I O HOH . A HOH 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc9 C MG MG . A MG 802 1_555 I O HOH . A HOH 933 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc10 C MG MG . A MG 802 1_555 I O HOH . A HOH 938 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc11 C MG MG . A MG 802 1_555 I O HOH . A HOH 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc12 C MG MG . A MG 802 1_555 I O HOH . A HOH 973 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc13 D K K . A K 803 1_555 I O HOH . A HOH 925 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc14 D K K . A K 803 1_555 I O HOH . A HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.144 ? metalc ? metalc15 D K K . A K 803 1_555 I O HOH . A HOH 933 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.871 ? metalc ? metalc16 D K K . A K 803 1_555 I O HOH . A HOH 973 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SHY _atom_sites.fract_transf_matrix[1][1] 0.007038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007038 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 801 1 ZN ZN . C 3 MG A 1 802 1 MG MG . D 4 K A 1 803 1 K K . E 5 CL A 1 804 1 CL CL . F 5 CL A 1 805 2 CL CL . G 5 CL A 1 806 3 CL CL . H 6 JJR A 1 807 1 JJR L0R . I 7 HOH A 1 901 43 HOH HOH . I 7 HOH A 2 902 53 HOH HOH . I 7 HOH A 3 903 65 HOH HOH . I 7 HOH A 4 904 34 HOH HOH . I 7 HOH A 5 905 19 HOH HOH . I 7 HOH A 6 906 10 HOH HOH . I 7 HOH A 7 907 73 HOH HOH . I 7 HOH A 8 908 44 HOH HOH . I 7 HOH A 9 909 5 HOH HOH . I 7 HOH A 10 910 63 HOH HOH . I 7 HOH A 11 911 41 HOH HOH . I 7 HOH A 12 912 29 HOH HOH . I 7 HOH A 13 913 50 HOH HOH . I 7 HOH A 14 914 27 HOH HOH . I 7 HOH A 15 915 83 HOH HOH . I 7 HOH A 16 916 45 HOH HOH . I 7 HOH A 17 917 35 HOH HOH . I 7 HOH A 18 918 56 HOH HOH . I 7 HOH A 19 919 46 HOH HOH . I 7 HOH A 20 920 15 HOH HOH . I 7 HOH A 21 921 9 HOH HOH . I 7 HOH A 22 922 42 HOH HOH . I 7 HOH A 23 923 48 HOH HOH . I 7 HOH A 24 924 71 HOH HOH . I 7 HOH A 25 925 64 HOH HOH . I 7 HOH A 26 926 14 HOH HOH . I 7 HOH A 27 927 26 HOH HOH . I 7 HOH A 28 928 77 HOH HOH . I 7 HOH A 29 929 21 HOH HOH . I 7 HOH A 30 930 66 HOH HOH . I 7 HOH A 31 931 31 HOH HOH . I 7 HOH A 32 932 22 HOH HOH . I 7 HOH A 33 933 1 HOH HOH . I 7 HOH A 34 934 54 HOH HOH . I 7 HOH A 35 935 37 HOH HOH . I 7 HOH A 36 936 17 HOH HOH . I 7 HOH A 37 937 40 HOH HOH . I 7 HOH A 38 938 4 HOH HOH . I 7 HOH A 39 939 7 HOH HOH . I 7 HOH A 40 940 51 HOH HOH . I 7 HOH A 41 941 8 HOH HOH . I 7 HOH A 42 942 47 HOH HOH . I 7 HOH A 43 943 11 HOH HOH . I 7 HOH A 44 944 13 HOH HOH . I 7 HOH A 45 945 28 HOH HOH . I 7 HOH A 46 946 36 HOH HOH . I 7 HOH A 47 947 25 HOH HOH . I 7 HOH A 48 948 52 HOH HOH . I 7 HOH A 49 949 16 HOH HOH . I 7 HOH A 50 950 12 HOH HOH . I 7 HOH A 51 951 39 HOH HOH . I 7 HOH A 52 952 57 HOH HOH . I 7 HOH A 53 953 24 HOH HOH . I 7 HOH A 54 954 2 HOH HOH . I 7 HOH A 55 955 78 HOH HOH . I 7 HOH A 56 956 18 HOH HOH . I 7 HOH A 57 957 62 HOH HOH . I 7 HOH A 58 958 74 HOH HOH . I 7 HOH A 59 959 30 HOH HOH . I 7 HOH A 60 960 49 HOH HOH . I 7 HOH A 61 961 58 HOH HOH . I 7 HOH A 62 962 20 HOH HOH . I 7 HOH A 63 963 70 HOH HOH . I 7 HOH A 64 964 23 HOH HOH . I 7 HOH A 65 965 76 HOH HOH . I 7 HOH A 66 966 55 HOH HOH . I 7 HOH A 67 967 84 HOH HOH . I 7 HOH A 68 968 32 HOH HOH . I 7 HOH A 69 969 79 HOH HOH . I 7 HOH A 70 970 33 HOH HOH . I 7 HOH A 71 971 72 HOH HOH . I 7 HOH A 72 972 61 HOH HOH . I 7 HOH A 73 973 3 HOH HOH . I 7 HOH A 74 974 81 HOH HOH . I 7 HOH A 75 975 60 HOH HOH . I 7 HOH A 76 976 69 HOH HOH . I 7 HOH A 77 977 38 HOH HOH . I 7 HOH A 78 978 68 HOH HOH . I 7 HOH A 79 979 67 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 32.565 _atom_site.Cartn_y 138.119 _atom_site.Cartn_z 30.7 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.16 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #