data_5SIM # _model_server_result.job_id gKGkvUNgGggTcyOxItxDvg _model_server_result.datetime_utc '2024-10-11 03:14:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sim # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 5SIM # _exptl.entry_id 5SIM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SIM _cell.length_a 141.935 _cell.length_b 141.935 _cell.length_c 141.935 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SIM _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 498 1_555 A SG CYS 56 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 A C LEU 62 A LEU 508 1_555 A N CME 63 A CME 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CME 63 A CME 509 1_555 A N ARG 64 A ARG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 A NE2 HIS 83 A HIS 529 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc2 A NE2 HIS 117 A HIS 563 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc3 A OD2 ASP 118 A ASP 564 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc4 A OD1 ASP 118 A ASP 564 1_555 C MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc5 A OD1 ASP 228 A ASP 674 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc6 B ZN ZN . A ZN 801 1_555 E O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc7 B ZN ZN . A ZN 801 1_555 E O HOH . A HOH 1063 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc8 C MG MG . A MG 802 1_555 E O HOH . A HOH 973 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc9 C MG MG . A MG 802 1_555 E O HOH . A HOH 980 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc10 C MG MG . A MG 802 1_555 E O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc11 C MG MG . A MG 802 1_555 E O HOH . A HOH 1034 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc12 C MG MG . A MG 802 1_555 E O HOH . A HOH 1060 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SIM _atom_sites.fract_transf_matrix[1][1] 0.007045 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007045 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 801 1 ZN ZN . C 3 MG A 1 802 2 MG MG . D 4 JQL A 1 803 1 JQL L0R . E 5 HOH A 1 901 251 HOH HOH . E 5 HOH A 2 902 164 HOH HOH . E 5 HOH A 3 903 118 HOH HOH . E 5 HOH A 4 904 162 HOH HOH . E 5 HOH A 5 905 136 HOH HOH . E 5 HOH A 6 906 267 HOH HOH . E 5 HOH A 7 907 208 HOH HOH . E 5 HOH A 8 908 240 HOH HOH . E 5 HOH A 9 909 169 HOH HOH . E 5 HOH A 10 910 236 HOH HOH . E 5 HOH A 11 911 229 HOH HOH . E 5 HOH A 12 912 122 HOH HOH . E 5 HOH A 13 913 93 HOH HOH . E 5 HOH A 14 914 130 HOH HOH . E 5 HOH A 15 915 34 HOH HOH . E 5 HOH A 16 916 52 HOH HOH . E 5 HOH A 17 917 174 HOH HOH . E 5 HOH A 18 918 67 HOH HOH . E 5 HOH A 19 919 20 HOH HOH . E 5 HOH A 20 920 41 HOH HOH . E 5 HOH A 21 921 64 HOH HOH . E 5 HOH A 22 922 45 HOH HOH . E 5 HOH A 23 923 215 HOH HOH . E 5 HOH A 24 924 191 HOH HOH . E 5 HOH A 25 925 54 HOH HOH . E 5 HOH A 26 926 79 HOH HOH . E 5 HOH A 27 927 65 HOH HOH . E 5 HOH A 28 928 84 HOH HOH . E 5 HOH A 29 929 176 HOH HOH . E 5 HOH A 30 930 147 HOH HOH . E 5 HOH A 31 931 167 HOH HOH . E 5 HOH A 32 932 48 HOH HOH . E 5 HOH A 33 933 179 HOH HOH . E 5 HOH A 34 934 185 HOH HOH . E 5 HOH A 35 935 75 HOH HOH . E 5 HOH A 36 936 239 HOH HOH . E 5 HOH A 37 937 94 HOH HOH . E 5 HOH A 38 938 16 HOH HOH . E 5 HOH A 39 939 132 HOH HOH . E 5 HOH A 40 940 193 HOH HOH . E 5 HOH A 41 941 70 HOH HOH . E 5 HOH A 42 942 258 HOH HOH . E 5 HOH A 43 943 107 HOH HOH . E 5 HOH A 44 944 228 HOH HOH . E 5 HOH A 45 945 47 HOH HOH . E 5 HOH A 46 946 81 HOH HOH . E 5 HOH A 47 947 243 HOH HOH . E 5 HOH A 48 948 141 HOH HOH . E 5 HOH A 49 949 90 HOH HOH . E 5 HOH A 50 950 190 HOH HOH . E 5 HOH A 51 951 216 HOH HOH . E 5 HOH A 52 952 92 HOH HOH . E 5 HOH A 53 953 29 HOH HOH . E 5 HOH A 54 954 51 HOH HOH . E 5 HOH A 55 955 146 HOH HOH . E 5 HOH A 56 956 194 HOH HOH . E 5 HOH A 57 957 244 HOH HOH . E 5 HOH A 58 958 225 HOH HOH . E 5 HOH A 59 959 115 HOH HOH . E 5 HOH A 60 960 68 HOH HOH . E 5 HOH A 61 961 248 HOH HOH . E 5 HOH A 62 962 27 HOH HOH . E 5 HOH A 63 963 38 HOH HOH . E 5 HOH A 64 964 23 HOH HOH . E 5 HOH A 65 965 50 HOH HOH . E 5 HOH A 66 966 9 HOH HOH . E 5 HOH A 67 967 99 HOH HOH . E 5 HOH A 68 968 237 HOH HOH . E 5 HOH A 69 969 186 HOH HOH . E 5 HOH A 70 970 234 HOH HOH . E 5 HOH A 71 971 233 HOH HOH . E 5 HOH A 72 972 25 HOH HOH . E 5 HOH A 73 973 4 HOH HOH . E 5 HOH A 74 974 57 HOH HOH . E 5 HOH A 75 975 85 HOH HOH . E 5 HOH A 76 976 129 HOH HOH . E 5 HOH A 77 977 101 HOH HOH . E 5 HOH A 78 978 55 HOH HOH . E 5 HOH A 79 979 10 HOH HOH . E 5 HOH A 80 980 5 HOH HOH . E 5 HOH A 81 981 149 HOH HOH . E 5 HOH A 82 982 40 HOH HOH . E 5 HOH A 83 983 134 HOH HOH . E 5 HOH A 84 984 100 HOH HOH . E 5 HOH A 85 985 197 HOH HOH . E 5 HOH A 86 986 189 HOH HOH . E 5 HOH A 87 987 58 HOH HOH . E 5 HOH A 88 988 31 HOH HOH . E 5 HOH A 89 989 242 HOH HOH . E 5 HOH A 90 990 211 HOH HOH . E 5 HOH A 91 991 143 HOH HOH . E 5 HOH A 92 992 263 HOH HOH . E 5 HOH A 93 993 157 HOH HOH . E 5 HOH A 94 994 59 HOH HOH . E 5 HOH A 95 995 32 HOH HOH . E 5 HOH A 96 996 12 HOH HOH . E 5 HOH A 97 997 96 HOH HOH . E 5 HOH A 98 998 110 HOH HOH . E 5 HOH A 99 999 196 HOH HOH . E 5 HOH A 100 1000 151 HOH HOH . E 5 HOH A 101 1001 266 HOH HOH . E 5 HOH A 102 1002 181 HOH HOH . E 5 HOH A 103 1003 63 HOH HOH . E 5 HOH A 104 1004 39 HOH HOH . E 5 HOH A 105 1005 1 HOH HOH . E 5 HOH A 106 1006 261 HOH HOH . E 5 HOH A 107 1007 128 HOH HOH . E 5 HOH A 108 1008 155 HOH HOH . E 5 HOH A 109 1009 177 HOH HOH . E 5 HOH A 110 1010 7 HOH HOH . E 5 HOH A 111 1011 33 HOH HOH . E 5 HOH A 112 1012 213 HOH HOH . E 5 HOH A 113 1013 166 HOH HOH . E 5 HOH A 114 1014 28 HOH HOH . E 5 HOH A 115 1015 14 HOH HOH . E 5 HOH A 116 1016 108 HOH HOH . E 5 HOH A 117 1017 44 HOH HOH . E 5 HOH A 118 1018 37 HOH HOH . E 5 HOH A 119 1019 60 HOH HOH . E 5 HOH A 120 1020 46 HOH HOH . E 5 HOH A 121 1021 105 HOH HOH . E 5 HOH A 122 1022 135 HOH HOH . E 5 HOH A 123 1023 56 HOH HOH . E 5 HOH A 124 1024 127 HOH HOH . E 5 HOH A 125 1025 22 HOH HOH . E 5 HOH A 126 1026 18 HOH HOH . E 5 HOH A 127 1027 43 HOH HOH . E 5 HOH A 128 1028 121 HOH HOH . E 5 HOH A 129 1029 76 HOH HOH . E 5 HOH A 130 1030 83 HOH HOH . E 5 HOH A 131 1031 17 HOH HOH . E 5 HOH A 132 1032 152 HOH HOH . E 5 HOH A 133 1033 8 HOH HOH . E 5 HOH A 134 1034 2 HOH HOH . E 5 HOH A 135 1035 61 HOH HOH . E 5 HOH A 136 1036 221 HOH HOH . E 5 HOH A 137 1037 13 HOH HOH . E 5 HOH A 138 1038 24 HOH HOH . E 5 HOH A 139 1039 69 HOH HOH . E 5 HOH A 140 1040 49 HOH HOH . E 5 HOH A 141 1041 117 HOH HOH . E 5 HOH A 142 1042 259 HOH HOH . E 5 HOH A 143 1043 139 HOH HOH . E 5 HOH A 144 1044 184 HOH HOH . E 5 HOH A 145 1045 11 HOH HOH . E 5 HOH A 146 1046 72 HOH HOH . E 5 HOH A 147 1047 198 HOH HOH . E 5 HOH A 148 1048 202 HOH HOH . E 5 HOH A 149 1049 53 HOH HOH . E 5 HOH A 150 1050 30 HOH HOH . E 5 HOH A 151 1051 26 HOH HOH . E 5 HOH A 152 1052 133 HOH HOH . E 5 HOH A 153 1053 183 HOH HOH . E 5 HOH A 154 1054 153 HOH HOH . E 5 HOH A 155 1055 102 HOH HOH . E 5 HOH A 156 1056 15 HOH HOH . E 5 HOH A 157 1057 62 HOH HOH . E 5 HOH A 158 1058 131 HOH HOH . E 5 HOH A 159 1059 238 HOH HOH . E 5 HOH A 160 1060 3 HOH HOH . E 5 HOH A 161 1061 73 HOH HOH . E 5 HOH A 162 1062 156 HOH HOH . E 5 HOH A 163 1063 6 HOH HOH . E 5 HOH A 164 1064 106 HOH HOH . E 5 HOH A 165 1065 19 HOH HOH . E 5 HOH A 166 1066 231 HOH HOH . E 5 HOH A 167 1067 71 HOH HOH . E 5 HOH A 168 1068 192 HOH HOH . E 5 HOH A 169 1069 87 HOH HOH . E 5 HOH A 170 1070 245 HOH HOH . E 5 HOH A 171 1071 88 HOH HOH . E 5 HOH A 172 1072 241 HOH HOH . E 5 HOH A 173 1073 168 HOH HOH . E 5 HOH A 174 1074 163 HOH HOH . E 5 HOH A 175 1075 188 HOH HOH . E 5 HOH A 176 1076 21 HOH HOH . E 5 HOH A 177 1077 78 HOH HOH . E 5 HOH A 178 1078 123 HOH HOH . E 5 HOH A 179 1079 119 HOH HOH . E 5 HOH A 180 1080 180 HOH HOH . E 5 HOH A 181 1081 125 HOH HOH . E 5 HOH A 182 1082 145 HOH HOH . E 5 HOH A 183 1083 86 HOH HOH . E 5 HOH A 184 1084 35 HOH HOH . E 5 HOH A 185 1085 97 HOH HOH . E 5 HOH A 186 1086 154 HOH HOH . E 5 HOH A 187 1087 109 HOH HOH . E 5 HOH A 188 1088 74 HOH HOH . E 5 HOH A 189 1089 201 HOH HOH . E 5 HOH A 190 1090 138 HOH HOH . E 5 HOH A 191 1091 137 HOH HOH . E 5 HOH A 192 1092 142 HOH HOH . E 5 HOH A 193 1093 150 HOH HOH . E 5 HOH A 194 1094 182 HOH HOH . E 5 HOH A 195 1095 120 HOH HOH . E 5 HOH A 196 1096 195 HOH HOH . E 5 HOH A 197 1097 95 HOH HOH . E 5 HOH A 198 1098 170 HOH HOH . E 5 HOH A 199 1099 124 HOH HOH . E 5 HOH A 200 1100 187 HOH HOH . E 5 HOH A 201 1101 246 HOH HOH . E 5 HOH A 202 1102 126 HOH HOH . E 5 HOH A 203 1103 247 HOH HOH . E 5 HOH A 204 1104 264 HOH HOH . E 5 HOH A 205 1105 36 HOH HOH . E 5 HOH A 206 1106 178 HOH HOH . E 5 HOH A 207 1107 114 HOH HOH . E 5 HOH A 208 1108 262 HOH HOH . E 5 HOH A 209 1109 199 HOH HOH . E 5 HOH A 210 1110 140 HOH HOH . E 5 HOH A 211 1111 235 HOH HOH . E 5 HOH A 212 1112 232 HOH HOH . E 5 HOH A 213 1113 148 HOH HOH . E 5 HOH A 214 1114 82 HOH HOH . E 5 HOH A 215 1115 227 HOH HOH . E 5 HOH A 216 1116 226 HOH HOH . E 5 HOH A 217 1117 268 HOH HOH . E 5 HOH A 218 1118 255 HOH HOH . E 5 HOH A 219 1119 98 HOH HOH . E 5 HOH A 220 1120 265 HOH HOH . E 5 HOH A 221 1121 160 HOH HOH . E 5 HOH A 222 1122 165 HOH HOH . E 5 HOH A 223 1123 89 HOH HOH . E 5 HOH A 224 1124 252 HOH HOH . E 5 HOH A 225 1125 104 HOH HOH . E 5 HOH A 226 1126 269 HOH HOH . E 5 HOH A 227 1127 219 HOH HOH . E 5 HOH A 228 1128 175 HOH HOH . E 5 HOH A 229 1129 159 HOH HOH . E 5 HOH A 230 1130 214 HOH HOH . E 5 HOH A 231 1131 116 HOH HOH . E 5 HOH A 232 1132 173 HOH HOH . E 5 HOH A 233 1133 209 HOH HOH . E 5 HOH A 234 1134 207 HOH HOH . E 5 HOH A 235 1135 66 HOH HOH . E 5 HOH A 236 1136 80 HOH HOH . E 5 HOH A 237 1137 270 HOH HOH . E 5 HOH A 238 1138 203 HOH HOH . E 5 HOH A 239 1139 206 HOH HOH . E 5 HOH A 240 1140 254 HOH HOH . E 5 HOH A 241 1141 91 HOH HOH . E 5 HOH A 242 1142 210 HOH HOH . E 5 HOH A 243 1143 257 HOH HOH . E 5 HOH A 244 1144 103 HOH HOH . E 5 HOH A 245 1145 161 HOH HOH . E 5 HOH A 246 1146 230 HOH HOH . E 5 HOH A 247 1147 256 HOH HOH . E 5 HOH A 248 1148 200 HOH HOH . E 5 HOH A 249 1149 204 HOH HOH . E 5 HOH A 250 1150 220 HOH HOH . E 5 HOH A 251 1151 217 HOH HOH . E 5 HOH A 252 1152 249 HOH HOH . E 5 HOH A 253 1153 111 HOH HOH . E 5 HOH A 254 1154 42 HOH HOH . E 5 HOH A 255 1155 222 HOH HOH . E 5 HOH A 256 1156 260 HOH HOH . E 5 HOH A 257 1157 77 HOH HOH . E 5 HOH A 258 1158 112 HOH HOH . E 5 HOH A 259 1159 113 HOH HOH . E 5 HOH A 260 1160 205 HOH HOH . E 5 HOH A 261 1161 223 HOH HOH . E 5 HOH A 262 1162 212 HOH HOH . E 5 HOH A 263 1163 250 HOH HOH . E 5 HOH A 264 1164 172 HOH HOH . E 5 HOH A 265 1165 158 HOH HOH . E 5 HOH A 266 1166 218 HOH HOH . E 5 HOH A 267 1167 224 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 137.97 _atom_site.Cartn_y 109.693 _atom_site.Cartn_z 30.627 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.59 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 802 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #