data_5SIX # _model_server_result.job_id SFquTPVn0EMLf0DyJYtMlA _model_server_result.datetime_utc '2024-10-11 02:22:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5six # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 5SIX # _exptl.entry_id 5SIX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SIX _cell.length_a 141.343 _cell.length_b 141.343 _cell.length_c 141.343 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SIX _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 498 1_555 A SG CYS 56 A CYS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? covale ? covale1 A C LEU 22 A LEU 468 1_555 A N CME 23 A CME 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CME 23 A CME 469 1_555 A N LYS 24 A LYS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 A C LEU 62 A LEU 508 1_555 A N CME 63 A CME 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C CME 63 A CME 509 1_555 A N ARG 64 A ARG 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A NE2 HIS 83 A HIS 529 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc2 A NE2 HIS 117 A HIS 563 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc3 A OD2 ASP 118 A ASP 564 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc4 A OD1 ASP 118 A ASP 564 1_555 D MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc5 A OD1 ASP 228 A ASP 674 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc6 C ZN ZN . A ZN 802 1_555 E O HOH . A HOH 913 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc7 C ZN ZN . A ZN 802 1_555 E O HOH . A HOH 930 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc8 D MG MG . A MG 803 1_555 E O HOH . A HOH 930 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc9 D MG MG . A MG 803 1_555 E O HOH . A HOH 933 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc10 D MG MG . A MG 803 1_555 E O HOH . A HOH 936 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc11 D MG MG . A MG 803 1_555 E O HOH . A HOH 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? metalc ? metalc12 D MG MG . A MG 803 1_555 E O HOH . A HOH 959 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SIX _atom_sites.fract_transf_matrix[1][1] 0.007075 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007075 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JU6 A 1 801 1 JU6 L0R . C 3 ZN A 1 802 1 ZN ZN . D 4 MG A 1 803 1 MG MG . E 5 HOH A 1 901 97 HOH HOH . E 5 HOH A 2 902 40 HOH HOH . E 5 HOH A 3 903 42 HOH HOH . E 5 HOH A 4 904 57 HOH HOH . E 5 HOH A 5 905 51 HOH HOH . E 5 HOH A 6 906 95 HOH HOH . E 5 HOH A 7 907 21 HOH HOH . E 5 HOH A 8 908 10 HOH HOH . E 5 HOH A 9 909 29 HOH HOH . E 5 HOH A 10 910 67 HOH HOH . E 5 HOH A 11 911 52 HOH HOH . E 5 HOH A 12 912 27 HOH HOH . E 5 HOH A 13 913 6 HOH HOH . E 5 HOH A 14 914 39 HOH HOH . E 5 HOH A 15 915 15 HOH HOH . E 5 HOH A 16 916 34 HOH HOH . E 5 HOH A 17 917 8 HOH HOH . E 5 HOH A 18 918 7 HOH HOH . E 5 HOH A 19 919 72 HOH HOH . E 5 HOH A 20 920 75 HOH HOH . E 5 HOH A 21 921 46 HOH HOH . E 5 HOH A 22 922 87 HOH HOH . E 5 HOH A 23 923 16 HOH HOH . E 5 HOH A 24 924 48 HOH HOH . E 5 HOH A 25 925 88 HOH HOH . E 5 HOH A 26 926 43 HOH HOH . E 5 HOH A 27 927 31 HOH HOH . E 5 HOH A 28 928 35 HOH HOH . E 5 HOH A 29 929 19 HOH HOH . E 5 HOH A 30 930 1 HOH HOH . E 5 HOH A 31 931 82 HOH HOH . E 5 HOH A 32 932 50 HOH HOH . E 5 HOH A 33 933 5 HOH HOH . E 5 HOH A 34 934 68 HOH HOH . E 5 HOH A 35 935 49 HOH HOH . E 5 HOH A 36 936 4 HOH HOH . E 5 HOH A 37 937 24 HOH HOH . E 5 HOH A 38 938 37 HOH HOH . E 5 HOH A 39 939 26 HOH HOH . E 5 HOH A 40 940 17 HOH HOH . E 5 HOH A 41 941 81 HOH HOH . E 5 HOH A 42 942 44 HOH HOH . E 5 HOH A 43 943 93 HOH HOH . E 5 HOH A 44 944 91 HOH HOH . E 5 HOH A 45 945 36 HOH HOH . E 5 HOH A 46 946 30 HOH HOH . E 5 HOH A 47 947 9 HOH HOH . E 5 HOH A 48 948 41 HOH HOH . E 5 HOH A 49 949 69 HOH HOH . E 5 HOH A 50 950 2 HOH HOH . E 5 HOH A 51 951 13 HOH HOH . E 5 HOH A 52 952 25 HOH HOH . E 5 HOH A 53 953 12 HOH HOH . E 5 HOH A 54 954 11 HOH HOH . E 5 HOH A 55 955 55 HOH HOH . E 5 HOH A 56 956 58 HOH HOH . E 5 HOH A 57 957 61 HOH HOH . E 5 HOH A 58 958 18 HOH HOH . E 5 HOH A 59 959 3 HOH HOH . E 5 HOH A 60 960 86 HOH HOH . E 5 HOH A 61 961 14 HOH HOH . E 5 HOH A 62 962 89 HOH HOH . E 5 HOH A 63 963 23 HOH HOH . E 5 HOH A 64 964 20 HOH HOH . E 5 HOH A 65 965 63 HOH HOH . E 5 HOH A 66 966 22 HOH HOH . E 5 HOH A 67 967 54 HOH HOH . E 5 HOH A 68 968 28 HOH HOH . E 5 HOH A 69 969 96 HOH HOH . E 5 HOH A 70 970 32 HOH HOH . E 5 HOH A 71 971 45 HOH HOH . E 5 HOH A 72 972 56 HOH HOH . E 5 HOH A 73 973 80 HOH HOH . E 5 HOH A 74 974 78 HOH HOH . E 5 HOH A 75 975 33 HOH HOH . E 5 HOH A 76 976 90 HOH HOH . E 5 HOH A 77 977 65 HOH HOH . E 5 HOH A 78 978 62 HOH HOH . E 5 HOH A 79 979 71 HOH HOH . E 5 HOH A 80 980 66 HOH HOH . E 5 HOH A 81 981 79 HOH HOH . E 5 HOH A 82 982 73 HOH HOH . E 5 HOH A 83 983 53 HOH HOH . E 5 HOH A 84 984 38 HOH HOH . E 5 HOH A 85 985 76 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -4.038 _atom_site.Cartn_y -32.384 _atom_site.Cartn_z 30.388 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.88 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 803 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #