data_5ST3 # _model_server_result.job_id dIYBKu5zh616Si8C7IZDIw _model_server_result.datetime_utc '2024-11-23 06:10:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5st3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2101}' # _entry.id 5ST3 # _exptl.entry_id 5ST3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 129.157 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description oxane-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.26 _cell.angle_gamma 90 _cell.entry_id 5ST3 _cell.length_a 88.765 _cell.length_b 82.06 _cell.length_c 93.56 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ST3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H11 N O2' _chem_comp.formula_weight 129.157 _chem_comp.id UWI _chem_comp.mon_nstd_flag . _chem_comp.name oxane-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C5 UWI sing 358 n n C5 O1 UWI doub 359 n n C5 C4 UWI sing 360 n n C C4 UWI sing 361 n n C C1 UWI sing 362 n n C4 C3 UWI sing 363 n n C3 C2 UWI sing 364 n n C1 O UWI sing 365 n n C2 O UWI sing 366 n n C1 H1 UWI sing 367 n n C1 H2 UWI sing 368 n n C4 H3 UWI sing 369 n n C3 H4 UWI sing 370 n n C3 H5 UWI sing 371 n n C2 H6 UWI sing 372 n n C2 H7 UWI sing 373 n n N H8 UWI sing 374 n n N H9 UWI sing 375 n n C H10 UWI sing 376 n n C H11 UWI sing 377 n n # _atom_sites.entry_id 5ST3 _atom_sites.fract_transf_matrix[1][1] 0.011266 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003717 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012186 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011255 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UWI A 1 2101 2101 UWI XXX . D 4 HOH A 1 2201 53 HOH HOH . D 4 HOH A 2 2202 71 HOH HOH . D 4 HOH A 3 2203 118 HOH HOH . D 4 HOH A 4 2204 96 HOH HOH . D 4 HOH A 5 2205 112 HOH HOH . D 4 HOH A 6 2206 94 HOH HOH . D 4 HOH A 7 2207 3 HOH HOH . D 4 HOH A 8 2208 13 HOH HOH . D 4 HOH A 9 2209 113 HOH HOH . D 4 HOH A 10 2210 18 HOH HOH . D 4 HOH A 11 2211 105 HOH HOH . D 4 HOH A 12 2212 21 HOH HOH . D 4 HOH A 13 2213 26 HOH HOH . D 4 HOH A 14 2214 51 HOH HOH . D 4 HOH A 15 2215 83 HOH HOH . D 4 HOH A 16 2216 6 HOH HOH . D 4 HOH A 17 2217 19 HOH HOH . D 4 HOH A 18 2218 11 HOH HOH . D 4 HOH A 19 2219 61 HOH HOH . D 4 HOH A 20 2220 27 HOH HOH . D 4 HOH A 21 2221 14 HOH HOH . D 4 HOH A 22 2222 74 HOH HOH . D 4 HOH A 23 2223 79 HOH HOH . D 4 HOH A 24 2224 25 HOH HOH . D 4 HOH A 25 2225 32 HOH HOH . D 4 HOH A 26 2226 2 HOH HOH . D 4 HOH A 27 2227 107 HOH HOH . D 4 HOH A 28 2228 76 HOH HOH . D 4 HOH A 29 2229 62 HOH HOH . D 4 HOH A 30 2230 90 HOH HOH . D 4 HOH A 31 2231 85 HOH HOH . D 4 HOH A 32 2232 12 HOH HOH . D 4 HOH A 33 2233 110 HOH HOH . D 4 HOH A 34 2234 100 HOH HOH . D 4 HOH A 35 2235 38 HOH HOH . D 4 HOH A 36 2236 35 HOH HOH . D 4 HOH A 37 2237 23 HOH HOH . D 4 HOH A 38 2238 111 HOH HOH . D 4 HOH A 39 2239 22 HOH HOH . D 4 HOH A 40 2240 89 HOH HOH . D 4 HOH A 41 2241 75 HOH HOH . D 4 HOH A 42 2242 119 HOH HOH . D 4 HOH A 43 2243 56 HOH HOH . D 4 HOH A 44 2244 77 HOH HOH . D 4 HOH A 45 2245 9 HOH HOH . D 4 HOH A 46 2246 52 HOH HOH . D 4 HOH A 47 2247 5 HOH HOH . D 4 HOH A 48 2248 93 HOH HOH . D 4 HOH A 49 2249 78 HOH HOH . D 4 HOH A 50 2250 69 HOH HOH . D 4 HOH A 51 2251 87 HOH HOH . D 4 HOH A 52 2252 109 HOH HOH . D 4 HOH A 53 2253 39 HOH HOH . D 4 HOH A 54 2254 108 HOH HOH . D 4 HOH A 55 2255 24 HOH HOH . D 4 HOH A 56 2256 28 HOH HOH . D 4 HOH A 57 2257 7 HOH HOH . D 4 HOH A 58 2258 63 HOH HOH . D 4 HOH A 59 2259 68 HOH HOH . D 4 HOH A 60 2260 102 HOH HOH . D 4 HOH A 61 2261 98 HOH HOH . D 4 HOH A 62 2262 121 HOH HOH . D 4 HOH A 63 2263 45 HOH HOH . D 4 HOH A 64 2264 42 HOH HOH . D 4 HOH A 65 2265 99 HOH HOH . D 4 HOH A 66 2266 82 HOH HOH . D 4 HOH A 67 2267 47 HOH HOH . E 4 HOH B 1 401 72 HOH HOH . E 4 HOH B 2 402 114 HOH HOH . E 4 HOH B 3 403 66 HOH HOH . E 4 HOH B 4 404 43 HOH HOH . E 4 HOH B 5 405 97 HOH HOH . E 4 HOH B 6 406 41 HOH HOH . E 4 HOH B 7 407 17 HOH HOH . E 4 HOH B 8 408 64 HOH HOH . E 4 HOH B 9 409 15 HOH HOH . E 4 HOH B 10 410 73 HOH HOH . E 4 HOH B 11 411 46 HOH HOH . E 4 HOH B 12 412 120 HOH HOH . E 4 HOH B 13 413 65 HOH HOH . E 4 HOH B 14 414 116 HOH HOH . E 4 HOH B 15 415 106 HOH HOH . E 4 HOH B 16 416 104 HOH HOH . E 4 HOH B 17 417 101 HOH HOH . E 4 HOH B 18 418 20 HOH HOH . E 4 HOH B 19 419 88 HOH HOH . E 4 HOH B 20 420 70 HOH HOH . E 4 HOH B 21 421 91 HOH HOH . E 4 HOH B 22 422 16 HOH HOH . E 4 HOH B 23 423 54 HOH HOH . E 4 HOH B 24 424 30 HOH HOH . E 4 HOH B 25 425 60 HOH HOH . E 4 HOH B 26 426 31 HOH HOH . E 4 HOH B 27 427 29 HOH HOH . E 4 HOH B 28 428 80 HOH HOH . E 4 HOH B 29 429 49 HOH HOH . E 4 HOH B 30 430 37 HOH HOH . E 4 HOH B 31 431 95 HOH HOH . E 4 HOH B 32 432 58 HOH HOH . E 4 HOH B 33 433 59 HOH HOH . E 4 HOH B 34 434 10 HOH HOH . E 4 HOH B 35 435 4 HOH HOH . E 4 HOH B 36 436 67 HOH HOH . E 4 HOH B 37 437 34 HOH HOH . E 4 HOH B 38 438 40 HOH HOH . E 4 HOH B 39 439 57 HOH HOH . E 4 HOH B 40 440 36 HOH HOH . E 4 HOH B 41 441 84 HOH HOH . E 4 HOH B 42 442 92 HOH HOH . E 4 HOH B 43 443 48 HOH HOH . E 4 HOH B 44 444 33 HOH HOH . E 4 HOH B 45 445 103 HOH HOH . E 4 HOH B 46 446 115 HOH HOH . E 4 HOH B 47 447 8 HOH HOH . E 4 HOH B 48 448 86 HOH HOH . E 4 HOH B 49 449 117 HOH HOH . E 4 HOH B 50 450 55 HOH HOH . E 4 HOH B 51 451 50 HOH HOH . E 4 HOH B 52 452 44 HOH HOH . E 4 HOH B 53 453 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 UWI . . . C 3 24.992 23.052 31.827 0.22 20 0 O1 UWI 2101 A 1 HETATM 2 C C1 UWI . . . C 3 21.589 24.95 34.02 0.22 20 0 C1 UWI 2101 A 1 HETATM 3 C C5 UWI . . . C 3 24.605 24.211 31.784 0.22 20 0 C5 UWI 2101 A 1 HETATM 4 C C4 UWI . . . C 3 23.815 24.791 32.929 0.22 20 0 C4 UWI 2101 A 1 HETATM 5 C C3 UWI . . . C 3 24.061 26.284 33.109 0.22 20 0 C3 UWI 2101 A 1 HETATM 6 C C2 UWI . . . C 3 22.954 26.852 34.026 0.22 20 0 C2 UWI 2101 A 1 HETATM 7 N N UWI . . . C 3 24.886 24.988 30.685 0.22 20 0 N UWI 2101 A 1 HETATM 8 C C UWI . . . C 3 22.329 24.579 32.717 0.22 20 0 C UWI 2101 A 1 HETATM 9 O O UWI . . . C 3 22.311 25.863 34.795 0.22 20 0 O UWI 2101 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 1184 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 9 #