data_5ST8 # _model_server_result.job_id zlYYLa33me19LWsrHAcnZQ _model_server_result.datetime_utc '2024-11-13 08:09:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5st8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5ST8 # _exptl.entry_id 5ST8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3-methoxyphenyl)acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.12 _cell.angle_gamma 90 _cell.entry_id 5ST8 _cell.length_a 88.943 _cell.length_b 81.884 _cell.length_c 93.426 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ST8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H10 O3' _chem_comp.formula_weight 166.174 _chem_comp.id V33 _chem_comp.mon_nstd_flag . _chem_comp.name '(3-methoxyphenyl)acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C8 V33 doub 358 n n C O V33 sing 359 n n O C1 V33 sing 360 n n C8 O2 V33 sing 361 n n C8 C7 V33 sing 362 n n C1 C6 V33 doub 363 n y C1 C2 V33 sing 364 n y C6 C5 V33 sing 365 n y C2 C3 V33 doub 366 n y C5 C7 V33 sing 367 n n C5 C4 V33 doub 368 n y C3 C4 V33 sing 369 n y C7 H1 V33 sing 370 n n C7 H2 V33 sing 371 n n C6 H3 V33 sing 372 n n C4 H4 V33 sing 373 n n C3 H5 V33 sing 374 n n C2 H6 V33 sing 375 n n O2 H7 V33 sing 376 n n C H8 V33 sing 377 n n C H9 V33 sing 378 n n C H10 V33 sing 379 n n # _atom_sites.entry_id 5ST8 _atom_sites.fract_transf_matrix[1][1] 0.011243 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003679 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 V33 B 1 401 401 V33 XXX . D 4 HOH A 1 2101 98 HOH HOH . D 4 HOH A 2 2102 80 HOH HOH . D 4 HOH A 3 2103 125 HOH HOH . D 4 HOH A 4 2104 27 HOH HOH . D 4 HOH A 5 2105 116 HOH HOH . D 4 HOH A 6 2106 58 HOH HOH . D 4 HOH A 7 2107 127 HOH HOH . D 4 HOH A 8 2108 84 HOH HOH . D 4 HOH A 9 2109 108 HOH HOH . D 4 HOH A 10 2110 42 HOH HOH . D 4 HOH A 11 2111 15 HOH HOH . D 4 HOH A 12 2112 16 HOH HOH . D 4 HOH A 13 2113 8 HOH HOH . D 4 HOH A 14 2114 41 HOH HOH . D 4 HOH A 15 2115 59 HOH HOH . D 4 HOH A 16 2116 78 HOH HOH . D 4 HOH A 17 2117 10 HOH HOH . D 4 HOH A 18 2118 43 HOH HOH . D 4 HOH A 19 2119 94 HOH HOH . D 4 HOH A 20 2120 87 HOH HOH . D 4 HOH A 21 2121 22 HOH HOH . D 4 HOH A 22 2122 2 HOH HOH . D 4 HOH A 23 2123 23 HOH HOH . D 4 HOH A 24 2124 32 HOH HOH . D 4 HOH A 25 2125 73 HOH HOH . D 4 HOH A 26 2126 63 HOH HOH . D 4 HOH A 27 2127 75 HOH HOH . D 4 HOH A 28 2128 7 HOH HOH . D 4 HOH A 29 2129 53 HOH HOH . D 4 HOH A 30 2130 18 HOH HOH . D 4 HOH A 31 2131 45 HOH HOH . D 4 HOH A 32 2132 91 HOH HOH . D 4 HOH A 33 2133 99 HOH HOH . D 4 HOH A 34 2134 74 HOH HOH . D 4 HOH A 35 2135 97 HOH HOH . D 4 HOH A 36 2136 26 HOH HOH . D 4 HOH A 37 2137 103 HOH HOH . D 4 HOH A 38 2138 106 HOH HOH . D 4 HOH A 39 2139 49 HOH HOH . D 4 HOH A 40 2140 109 HOH HOH . D 4 HOH A 41 2141 86 HOH HOH . D 4 HOH A 42 2142 51 HOH HOH . D 4 HOH A 43 2143 12 HOH HOH . D 4 HOH A 44 2144 50 HOH HOH . D 4 HOH A 45 2145 95 HOH HOH . D 4 HOH A 46 2146 64 HOH HOH . D 4 HOH A 47 2147 93 HOH HOH . D 4 HOH A 48 2148 31 HOH HOH . D 4 HOH A 49 2149 6 HOH HOH . D 4 HOH A 50 2150 56 HOH HOH . D 4 HOH A 51 2151 101 HOH HOH . D 4 HOH A 52 2152 17 HOH HOH . D 4 HOH A 53 2153 115 HOH HOH . D 4 HOH A 54 2154 107 HOH HOH . D 4 HOH A 55 2155 83 HOH HOH . D 4 HOH A 56 2156 48 HOH HOH . D 4 HOH A 57 2157 67 HOH HOH . D 4 HOH A 58 2158 34 HOH HOH . D 4 HOH A 59 2159 100 HOH HOH . D 4 HOH A 60 2160 82 HOH HOH . D 4 HOH A 61 2161 112 HOH HOH . D 4 HOH A 62 2162 123 HOH HOH . D 4 HOH A 63 2163 124 HOH HOH . D 4 HOH A 64 2164 55 HOH HOH . E 4 HOH B 1 501 96 HOH HOH . E 4 HOH B 2 502 3 HOH HOH . E 4 HOH B 3 503 60 HOH HOH . E 4 HOH B 4 504 129 HOH HOH . E 4 HOH B 5 505 90 HOH HOH . E 4 HOH B 6 506 36 HOH HOH . E 4 HOH B 7 507 47 HOH HOH . E 4 HOH B 8 508 62 HOH HOH . E 4 HOH B 9 509 65 HOH HOH . E 4 HOH B 10 510 37 HOH HOH . E 4 HOH B 11 511 57 HOH HOH . E 4 HOH B 12 512 20 HOH HOH . E 4 HOH B 13 513 11 HOH HOH . E 4 HOH B 14 514 113 HOH HOH . E 4 HOH B 15 515 114 HOH HOH . E 4 HOH B 16 516 33 HOH HOH . E 4 HOH B 17 517 70 HOH HOH . E 4 HOH B 18 518 89 HOH HOH . E 4 HOH B 19 519 128 HOH HOH . E 4 HOH B 20 520 35 HOH HOH . E 4 HOH B 21 521 66 HOH HOH . E 4 HOH B 22 522 79 HOH HOH . E 4 HOH B 23 523 5 HOH HOH . E 4 HOH B 24 524 14 HOH HOH . E 4 HOH B 25 525 122 HOH HOH . E 4 HOH B 26 526 76 HOH HOH . E 4 HOH B 27 527 25 HOH HOH . E 4 HOH B 28 528 104 HOH HOH . E 4 HOH B 29 529 102 HOH HOH . E 4 HOH B 30 530 118 HOH HOH . E 4 HOH B 31 531 85 HOH HOH . E 4 HOH B 32 532 61 HOH HOH . E 4 HOH B 33 533 44 HOH HOH . E 4 HOH B 34 534 52 HOH HOH . E 4 HOH B 35 535 54 HOH HOH . E 4 HOH B 36 536 30 HOH HOH . E 4 HOH B 37 537 24 HOH HOH . E 4 HOH B 38 538 77 HOH HOH . E 4 HOH B 39 539 72 HOH HOH . E 4 HOH B 40 540 13 HOH HOH . E 4 HOH B 41 541 21 HOH HOH . E 4 HOH B 42 542 40 HOH HOH . E 4 HOH B 43 543 71 HOH HOH . E 4 HOH B 44 544 46 HOH HOH . E 4 HOH B 45 545 117 HOH HOH . E 4 HOH B 46 546 4 HOH HOH . E 4 HOH B 47 547 28 HOH HOH . E 4 HOH B 48 548 88 HOH HOH . E 4 HOH B 49 549 39 HOH HOH . E 4 HOH B 50 550 9 HOH HOH . E 4 HOH B 51 551 92 HOH HOH . E 4 HOH B 52 552 29 HOH HOH . E 4 HOH B 53 553 110 HOH HOH . E 4 HOH B 54 554 120 HOH HOH . E 4 HOH B 55 555 111 HOH HOH . E 4 HOH B 56 556 38 HOH HOH . E 4 HOH B 57 557 121 HOH HOH . E 4 HOH B 58 558 81 HOH HOH . E 4 HOH B 59 559 126 HOH HOH . E 4 HOH B 60 560 69 HOH HOH . E 4 HOH B 61 561 105 HOH HOH . E 4 HOH B 62 562 19 HOH HOH . E 4 HOH B 63 563 68 HOH HOH . E 4 HOH B 64 564 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 V33 . . . C 3 -2.801 15.091 -34.287 0.34 20 0 C7 V33 401 B 1 HETATM 2 C C8 V33 . . . C 3 -3.733 15.486 -35.489 0.34 20 0 C8 V33 401 B 1 HETATM 3 O O1 V33 . . . C 3 -3.259 16.233 -36.338 0.34 20 0 O1 V33 401 B 1 HETATM 4 C C1 V33 . . . C 3 -0.326 12.413 -35.178 0.34 20 0 C1 V33 401 B 1 HETATM 5 C C5 V33 . . . C 3 -2.173 13.774 -34.518 0.34 20 0 C5 V33 401 B 1 HETATM 6 C C6 V33 . . . C 3 -0.869 13.66 -34.984 0.34 20 0 C6 V33 401 B 1 HETATM 7 C C4 V33 . . . C 3 -2.911 12.63 -34.25 0.34 20 0 C4 V33 401 B 1 HETATM 8 C C3 V33 . . . C 3 -2.345 11.387 -34.448 0.34 20 0 C3 V33 401 B 1 HETATM 9 C C2 V33 . . . C 3 -1.044 11.262 -34.916 0.34 20 0 C2 V33 401 B 1 HETATM 10 O O2 V33 . . . C 3 -4.874 15.035 -35.484 0.34 20 -1 O2 V33 401 B 1 HETATM 11 O O V33 . . . C 3 0.948 12.276 -35.652 0.34 20 0 O V33 401 B 1 HETATM 12 C C V33 . . . C 3 1.554 13.48 -36.012 0.34 20 0 C V33 401 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #