data_5STB # _model_server_result.job_id 6Bn2344mv-QjuT3jwMXcXg _model_server_result.datetime_utc '2024-11-16 07:36:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5stb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 5STB # _exptl.entry_id 5STB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 172.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-ethyl-5-(ethylsulfanyl)-4H-1,2,4-triazol-4-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.17 _cell.angle_gamma 90 _cell.entry_id 5STB _cell.length_a 88.367 _cell.length_b 81.894 _cell.length_c 93.643 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5STB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C6 H12 N4 S' _chem_comp.formula_weight 172.251 _chem_comp.id V99 _chem_comp.mon_nstd_flag . _chem_comp.name 3-ethyl-5-(ethylsulfanyl)-4H-1,2,4-triazol-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C4 V99 sing 358 n n C4 S V99 sing 359 n n S C3 V99 sing 360 n n N1 C3 V99 doub 361 n y N1 N V99 sing 362 n y C3 N2 V99 sing 363 n y N C2 V99 doub 364 n y N2 C2 V99 sing 365 n y N2 N3 V99 sing 366 n n C2 C1 V99 sing 367 n n C1 C V99 sing 368 n n C1 H1 V99 sing 369 n n C1 H2 V99 sing 370 n n C5 H3 V99 sing 371 n n C5 H4 V99 sing 372 n n C5 H5 V99 sing 373 n n N3 H6 V99 sing 374 n n N3 H7 V99 sing 375 n n C4 H8 V99 sing 376 n n C4 H9 V99 sing 377 n n C H10 V99 sing 378 n n C H11 V99 sing 379 n n C H12 V99 sing 380 n n # _atom_sites.entry_id 5STB _atom_sites.fract_transf_matrix[1][1] 0.011316 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003714 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011239 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 V99 A 1 2101 2101 V99 XXX . D 3 V99 B 1 401 401 V99 XXX . E 4 HOH A 1 2201 92 HOH HOH . E 4 HOH A 2 2202 3 HOH HOH . E 4 HOH A 3 2203 42 HOH HOH . E 4 HOH A 4 2204 16 HOH HOH . E 4 HOH A 5 2205 9 HOH HOH . E 4 HOH A 6 2206 14 HOH HOH . E 4 HOH A 7 2207 25 HOH HOH . E 4 HOH A 8 2208 45 HOH HOH . E 4 HOH A 9 2209 32 HOH HOH . E 4 HOH A 10 2210 15 HOH HOH . E 4 HOH A 11 2211 41 HOH HOH . E 4 HOH A 12 2212 49 HOH HOH . E 4 HOH A 13 2213 2 HOH HOH . E 4 HOH A 14 2214 10 HOH HOH . E 4 HOH A 15 2215 19 HOH HOH . E 4 HOH A 16 2216 6 HOH HOH . E 4 HOH A 17 2217 12 HOH HOH . E 4 HOH A 18 2218 53 HOH HOH . E 4 HOH A 19 2219 88 HOH HOH . E 4 HOH A 20 2220 8 HOH HOH . E 4 HOH A 21 2221 77 HOH HOH . E 4 HOH A 22 2222 71 HOH HOH . E 4 HOH A 23 2223 5 HOH HOH . E 4 HOH A 24 2224 84 HOH HOH . E 4 HOH A 25 2225 79 HOH HOH . E 4 HOH A 26 2226 24 HOH HOH . E 4 HOH A 27 2227 65 HOH HOH . E 4 HOH A 28 2228 74 HOH HOH . E 4 HOH A 29 2229 73 HOH HOH . E 4 HOH A 30 2230 80 HOH HOH . E 4 HOH A 31 2231 56 HOH HOH . E 4 HOH A 32 2232 57 HOH HOH . E 4 HOH A 33 2233 30 HOH HOH . E 4 HOH A 34 2234 47 HOH HOH . E 4 HOH A 35 2235 87 HOH HOH . E 4 HOH A 36 2236 58 HOH HOH . E 4 HOH A 37 2237 72 HOH HOH . E 4 HOH A 38 2238 21 HOH HOH . E 4 HOH A 39 2239 22 HOH HOH . E 4 HOH A 40 2240 44 HOH HOH . E 4 HOH A 41 2241 66 HOH HOH . E 4 HOH A 42 2242 59 HOH HOH . E 4 HOH A 43 2243 76 HOH HOH . E 4 HOH A 44 2244 60 HOH HOH . E 4 HOH A 45 2245 55 HOH HOH . E 4 HOH A 46 2246 51 HOH HOH . E 4 HOH A 47 2247 11 HOH HOH . E 4 HOH A 48 2248 63 HOH HOH . E 4 HOH A 49 2249 85 HOH HOH . E 4 HOH A 50 2250 52 HOH HOH . F 4 HOH B 1 501 39 HOH HOH . F 4 HOH B 2 502 89 HOH HOH . F 4 HOH B 3 503 36 HOH HOH . F 4 HOH B 4 504 68 HOH HOH . F 4 HOH B 5 505 69 HOH HOH . F 4 HOH B 6 506 17 HOH HOH . F 4 HOH B 7 507 27 HOH HOH . F 4 HOH B 8 508 82 HOH HOH . F 4 HOH B 9 509 67 HOH HOH . F 4 HOH B 10 510 26 HOH HOH . F 4 HOH B 11 511 83 HOH HOH . F 4 HOH B 12 512 23 HOH HOH . F 4 HOH B 13 513 81 HOH HOH . F 4 HOH B 14 514 50 HOH HOH . F 4 HOH B 15 515 91 HOH HOH . F 4 HOH B 16 516 33 HOH HOH . F 4 HOH B 17 517 54 HOH HOH . F 4 HOH B 18 518 34 HOH HOH . F 4 HOH B 19 519 86 HOH HOH . F 4 HOH B 20 520 40 HOH HOH . F 4 HOH B 21 521 64 HOH HOH . F 4 HOH B 22 522 48 HOH HOH . F 4 HOH B 23 523 28 HOH HOH . F 4 HOH B 24 524 20 HOH HOH . F 4 HOH B 25 525 75 HOH HOH . F 4 HOH B 26 526 38 HOH HOH . F 4 HOH B 27 527 62 HOH HOH . F 4 HOH B 28 528 78 HOH HOH . F 4 HOH B 29 529 35 HOH HOH . F 4 HOH B 30 530 29 HOH HOH . F 4 HOH B 31 531 18 HOH HOH . F 4 HOH B 32 532 31 HOH HOH . F 4 HOH B 33 533 4 HOH HOH . F 4 HOH B 34 534 70 HOH HOH . F 4 HOH B 35 535 61 HOH HOH . F 4 HOH B 36 536 43 HOH HOH . F 4 HOH B 37 537 93 HOH HOH . F 4 HOH B 38 538 7 HOH HOH . F 4 HOH B 39 539 13 HOH HOH . F 4 HOH B 40 540 46 HOH HOH . F 4 HOH B 41 541 90 HOH HOH . F 4 HOH B 42 542 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 V99 . . . D 3 14.784 13.688 -44.138 0.32 20 0 N1 V99 401 B 1 HETATM 2 N N2 V99 . . . D 3 14.43 11.724 -45.082 0.32 20 0 N2 V99 401 B 1 HETATM 3 C C1 V99 . . . D 3 14.762 12.341 -47.5 0.32 20 0 C1 V99 401 B 1 HETATM 4 C C5 V99 . . . D 3 15.848 13.007 -40.657 0.32 20 0 C5 V99 401 B 1 HETATM 5 N N3 V99 . . . D 3 14.185 10.406 -45.357 0.32 20 0 N3 V99 401 B 1 HETATM 6 C C4 V99 . . . D 3 14.584 13.29 -41.429 0.32 20 0 C4 V99 401 B 1 HETATM 7 C C3 V99 . . . D 3 14.5 12.418 -43.872 0.32 20 0 C3 V99 401 B 1 HETATM 8 C C2 V99 . . . D 3 14.698 12.665 -46.067 0.32 20 0 C2 V99 401 B 1 HETATM 9 C C V99 . . . D 3 16.094 11.686 -47.792 0.32 20 0 C V99 401 B 1 HETATM 10 N N V99 . . . D 3 14.898 13.838 -45.455 0.32 20 0 N V99 401 B 1 HETATM 11 S S V99 . . . D 3 14.214 11.78 -42.34 0.32 20 0 S V99 401 B 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #