data_5STG # _model_server_result.job_id Nl3ShB4JatC6jsT0CCZL6Q _model_server_result.datetime_utc '2024-11-13 07:54:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5stg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5STG # _exptl.entry_id 5STG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.982 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4-ethoxyphenyl)-oxidanyl-oxidanylidene-boron _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.38 _cell.angle_gamma 90 _cell.entry_id 5STG _cell.length_a 89.389 _cell.length_b 81.473 _cell.length_c 93.142 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5STG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C8 H11 B O3' _chem_comp.formula_weight 165.982 _chem_comp.id VOW _chem_comp.mon_nstd_flag . _chem_comp.name (4-ethoxyphenyl)-oxidanyl-oxidanylidene-boron _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 B VOW sing 376 n n C5 C4 VOW doub 377 n y C5 C VOW sing 378 n y B O1 VOW sing 379 n n B C VOW sing 380 n n C4 C3 VOW sing 381 n y C C1 VOW doub 382 n y C3 O VOW sing 383 n n C3 C2 VOW doub 384 n y C1 C2 VOW sing 385 n y O C6 VOW sing 386 n n C7 C6 VOW sing 387 n n C7 H1 VOW sing 388 n n C7 H2 VOW sing 389 n n C7 H3 VOW sing 390 n n C1 H4 VOW sing 391 n n C5 H5 VOW sing 392 n n C6 H6 VOW sing 393 n n C6 H7 VOW sing 394 n n C4 H8 VOW sing 395 n n C2 H9 VOW sing 396 n n O2 H10 VOW sing 397 n n O1 H11 VOW sing 398 n n # _atom_sites.entry_id 5STG _atom_sites.fract_transf_matrix[1][1] 0.011187 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003717 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011313 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VOW B 1 401 401 VOW XXX . D 3 VOW B 1 402 501 VOW XXX . E 4 HOH A 1 2101 107 HOH HOH . E 4 HOH A 2 2102 25 HOH HOH . E 4 HOH A 3 2103 105 HOH HOH . E 4 HOH A 4 2104 3 HOH HOH . E 4 HOH A 5 2105 65 HOH HOH . E 4 HOH A 6 2106 32 HOH HOH . E 4 HOH A 7 2107 45 HOH HOH . E 4 HOH A 8 2108 39 HOH HOH . E 4 HOH A 9 2109 66 HOH HOH . E 4 HOH A 10 2110 63 HOH HOH . E 4 HOH A 11 2111 8 HOH HOH . E 4 HOH A 12 2112 23 HOH HOH . E 4 HOH A 13 2113 84 HOH HOH . E 4 HOH A 14 2114 31 HOH HOH . E 4 HOH A 15 2115 15 HOH HOH . E 4 HOH A 16 2116 97 HOH HOH . E 4 HOH A 17 2117 86 HOH HOH . E 4 HOH A 18 2118 68 HOH HOH . E 4 HOH A 19 2119 53 HOH HOH . E 4 HOH A 20 2120 13 HOH HOH . E 4 HOH A 21 2121 37 HOH HOH . E 4 HOH A 22 2122 36 HOH HOH . E 4 HOH A 23 2123 104 HOH HOH . E 4 HOH A 24 2124 77 HOH HOH . E 4 HOH A 25 2125 60 HOH HOH . E 4 HOH A 26 2126 100 HOH HOH . E 4 HOH A 27 2127 72 HOH HOH . E 4 HOH A 28 2128 56 HOH HOH . E 4 HOH A 29 2129 50 HOH HOH . E 4 HOH A 30 2130 33 HOH HOH . E 4 HOH A 31 2131 17 HOH HOH . E 4 HOH A 32 2132 76 HOH HOH . E 4 HOH A 33 2133 89 HOH HOH . E 4 HOH A 34 2134 24 HOH HOH . E 4 HOH A 35 2135 5 HOH HOH . E 4 HOH A 36 2136 91 HOH HOH . E 4 HOH A 37 2137 82 HOH HOH . E 4 HOH A 38 2138 29 HOH HOH . E 4 HOH A 39 2139 26 HOH HOH . E 4 HOH A 40 2140 94 HOH HOH . E 4 HOH A 41 2141 20 HOH HOH . E 4 HOH A 42 2142 69 HOH HOH . E 4 HOH A 43 2143 42 HOH HOH . E 4 HOH A 44 2144 98 HOH HOH . E 4 HOH A 45 2145 2 HOH HOH . E 4 HOH A 46 2146 83 HOH HOH . E 4 HOH A 47 2147 9 HOH HOH . E 4 HOH A 48 2148 51 HOH HOH . E 4 HOH A 49 2149 11 HOH HOH . E 4 HOH A 50 2150 96 HOH HOH . E 4 HOH A 51 2151 49 HOH HOH . E 4 HOH A 52 2152 88 HOH HOH . E 4 HOH A 53 2153 78 HOH HOH . E 4 HOH A 54 2154 57 HOH HOH . E 4 HOH A 55 2155 16 HOH HOH . F 4 HOH B 1 501 101 HOH HOH . F 4 HOH B 2 502 108 HOH HOH . F 4 HOH B 3 503 95 HOH HOH . F 4 HOH B 4 504 93 HOH HOH . F 4 HOH B 5 505 35 HOH HOH . F 4 HOH B 6 506 64 HOH HOH . F 4 HOH B 7 507 103 HOH HOH . F 4 HOH B 8 508 10 HOH HOH . F 4 HOH B 9 509 73 HOH HOH . F 4 HOH B 10 510 6 HOH HOH . F 4 HOH B 11 511 27 HOH HOH . F 4 HOH B 12 512 40 HOH HOH . F 4 HOH B 13 513 79 HOH HOH . F 4 HOH B 14 514 67 HOH HOH . F 4 HOH B 15 515 47 HOH HOH . F 4 HOH B 16 516 38 HOH HOH . F 4 HOH B 17 517 7 HOH HOH . F 4 HOH B 18 518 85 HOH HOH . F 4 HOH B 19 519 43 HOH HOH . F 4 HOH B 20 520 61 HOH HOH . F 4 HOH B 21 521 46 HOH HOH . F 4 HOH B 22 522 81 HOH HOH . F 4 HOH B 23 523 74 HOH HOH . F 4 HOH B 24 524 22 HOH HOH . F 4 HOH B 25 525 28 HOH HOH . F 4 HOH B 26 526 99 HOH HOH . F 4 HOH B 27 527 34 HOH HOH . F 4 HOH B 28 528 80 HOH HOH . F 4 HOH B 29 529 52 HOH HOH . F 4 HOH B 30 530 71 HOH HOH . F 4 HOH B 31 531 58 HOH HOH . F 4 HOH B 32 532 30 HOH HOH . F 4 HOH B 33 533 54 HOH HOH . F 4 HOH B 34 534 4 HOH HOH . F 4 HOH B 35 535 44 HOH HOH . F 4 HOH B 36 536 55 HOH HOH . F 4 HOH B 37 537 21 HOH HOH . F 4 HOH B 38 538 19 HOH HOH . F 4 HOH B 39 539 41 HOH HOH . F 4 HOH B 40 540 18 HOH HOH . F 4 HOH B 41 541 70 HOH HOH . F 4 HOH B 42 542 48 HOH HOH . F 4 HOH B 43 543 87 HOH HOH . F 4 HOH B 44 544 90 HOH HOH . F 4 HOH B 45 545 12 HOH HOH . F 4 HOH B 46 546 14 HOH HOH . F 4 HOH B 47 547 106 HOH HOH . F 4 HOH B 48 548 75 HOH HOH . F 4 HOH B 49 549 62 HOH HOH . F 4 HOH B 50 550 92 HOH HOH . F 4 HOH B 51 551 102 HOH HOH . F 4 HOH B 52 552 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 VOW . . . D 3 12.942 11.749 -42.342 0.46 20 0 C7 VOW 402 B 1 HETATM 2 O O1 VOW . . . D 3 20.95 11.946 -39.445 0.46 20 0 O1 VOW 402 B 1 HETATM 3 C C1 VOW . . . D 3 18.21 11.934 -40.753 0.46 20 0 C1 VOW 402 B 1 HETATM 4 C C5 VOW . . . D 3 17.587 13.513 -39.1 0.46 20 0 C5 VOW 402 B 1 HETATM 5 C C6 VOW . . . D 3 14.462 11.775 -42.24 0.46 20 0 C6 VOW 402 B 1 HETATM 6 C C4 VOW . . . D 3 16.291 13.533 -39.563 0.46 20 0 C4 VOW 402 B 1 HETATM 7 C C3 VOW . . . D 3 15.967 12.745 -40.656 0.46 20 0 C3 VOW 402 B 1 HETATM 8 C C2 VOW . . . D 3 16.93 11.936 -41.27 0.46 20 0 C2 VOW 402 B 1 HETATM 9 O O2 VOW . . . D 3 20.306 13.587 -38.186 0.46 20 0 O2 VOW 402 B 1 HETATM 10 B B VOW . . . D 3 19.937 12.718 -39.105 0.46 20 0 B VOW 402 B 1 HETATM 11 C C VOW . . . D 3 18.567 12.726 -39.671 0.46 20 0 C VOW 402 B 1 HETATM 12 O O VOW . . . D 3 14.725 12.653 -41.151 0.46 20 0 O VOW 402 B 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 12 #