data_5STJ # _model_server_result.job_id U8JR8MWxot-mZteF1I6B3Q _model_server_result.datetime_utc '2024-11-13 08:11:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5stj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5STJ # _exptl.entry_id 5STJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 151.206 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(3-methoxy-4-methylphenyl)methanamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.21 _cell.angle_gamma 90 _cell.entry_id 5STJ _cell.length_a 89.972 _cell.length_b 81.825 _cell.length_c 93.749 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5STJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C9 H13 N O' _chem_comp.formula_weight 151.206 _chem_comp.id W8F _chem_comp.mon_nstd_flag . _chem_comp.name 1-(3-methoxy-4-methylphenyl)methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 O W8F sing 376 n n O C6 W8F sing 377 n n C5 C6 W8F doub 378 n y C5 C4 W8F sing 379 n y C6 C1 W8F sing 380 n y N C8 W8F sing 381 n n C4 C8 W8F sing 382 n n C4 C3 W8F doub 383 n y C1 C W8F sing 384 n n C1 C2 W8F doub 385 n y C3 C2 W8F sing 386 n y C7 H1 W8F sing 387 n n C7 H2 W8F sing 388 n n C7 H3 W8F sing 389 n n C8 H4 W8F sing 390 n n C8 H5 W8F sing 391 n n C5 H6 W8F sing 392 n n C3 H7 W8F sing 393 n n C2 H8 W8F sing 394 n n N H9 W8F sing 395 n n N H10 W8F sing 396 n n C H12 W8F sing 397 n n C H13 W8F sing 398 n n C H14 W8F sing 399 n n # _atom_sites.entry_id 5STJ _atom_sites.fract_transf_matrix[1][1] 0.011115 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003656 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 W8F B 1 401 401 W8F XXX . D 3 W8F B 1 402 501 W8F XXX . E 4 HOH A 1 2101 32 HOH HOH . E 4 HOH A 2 2102 64 HOH HOH . E 4 HOH A 3 2103 68 HOH HOH . E 4 HOH A 4 2104 18 HOH HOH . E 4 HOH A 5 2105 71 HOH HOH . E 4 HOH A 6 2106 15 HOH HOH . E 4 HOH A 7 2107 4 HOH HOH . E 4 HOH A 8 2108 49 HOH HOH . E 4 HOH A 9 2109 37 HOH HOH . E 4 HOH A 10 2110 50 HOH HOH . E 4 HOH A 11 2111 80 HOH HOH . E 4 HOH A 12 2112 10 HOH HOH . E 4 HOH A 13 2113 38 HOH HOH . E 4 HOH A 14 2114 61 HOH HOH . E 4 HOH A 15 2115 33 HOH HOH . E 4 HOH A 16 2116 56 HOH HOH . E 4 HOH A 17 2117 63 HOH HOH . E 4 HOH A 18 2118 60 HOH HOH . E 4 HOH A 19 2119 3 HOH HOH . E 4 HOH A 20 2120 57 HOH HOH . E 4 HOH A 21 2121 44 HOH HOH . E 4 HOH A 22 2122 23 HOH HOH . E 4 HOH A 23 2123 19 HOH HOH . E 4 HOH A 24 2124 43 HOH HOH . E 4 HOH A 25 2125 66 HOH HOH . E 4 HOH A 26 2126 54 HOH HOH . E 4 HOH A 27 2127 20 HOH HOH . E 4 HOH A 28 2128 55 HOH HOH . E 4 HOH A 29 2129 7 HOH HOH . E 4 HOH A 30 2130 22 HOH HOH . E 4 HOH A 31 2131 28 HOH HOH . E 4 HOH A 32 2132 67 HOH HOH . E 4 HOH A 33 2133 34 HOH HOH . E 4 HOH A 34 2134 26 HOH HOH . E 4 HOH A 35 2135 58 HOH HOH . E 4 HOH A 36 2136 48 HOH HOH . E 4 HOH A 37 2137 9 HOH HOH . E 4 HOH A 38 2138 6 HOH HOH . E 4 HOH A 39 2139 41 HOH HOH . E 4 HOH A 40 2140 75 HOH HOH . E 4 HOH A 41 2141 70 HOH HOH . E 4 HOH A 42 2142 69 HOH HOH . E 4 HOH A 43 2143 65 HOH HOH . F 4 HOH B 1 501 81 HOH HOH . F 4 HOH B 2 502 79 HOH HOH . F 4 HOH B 3 503 82 HOH HOH . F 4 HOH B 4 504 46 HOH HOH . F 4 HOH B 5 505 77 HOH HOH . F 4 HOH B 6 506 40 HOH HOH . F 4 HOH B 7 507 78 HOH HOH . F 4 HOH B 8 508 13 HOH HOH . F 4 HOH B 9 509 47 HOH HOH . F 4 HOH B 10 510 29 HOH HOH . F 4 HOH B 11 511 42 HOH HOH . F 4 HOH B 12 512 31 HOH HOH . F 4 HOH B 13 513 52 HOH HOH . F 4 HOH B 14 514 25 HOH HOH . F 4 HOH B 15 515 84 HOH HOH . F 4 HOH B 16 516 12 HOH HOH . F 4 HOH B 17 517 51 HOH HOH . F 4 HOH B 18 518 39 HOH HOH . F 4 HOH B 19 519 16 HOH HOH . F 4 HOH B 20 520 74 HOH HOH . F 4 HOH B 21 521 59 HOH HOH . F 4 HOH B 22 522 14 HOH HOH . F 4 HOH B 23 523 11 HOH HOH . F 4 HOH B 24 524 8 HOH HOH . F 4 HOH B 25 525 45 HOH HOH . F 4 HOH B 26 526 76 HOH HOH . F 4 HOH B 27 527 30 HOH HOH . F 4 HOH B 28 528 36 HOH HOH . F 4 HOH B 29 529 62 HOH HOH . F 4 HOH B 30 530 53 HOH HOH . F 4 HOH B 31 531 24 HOH HOH . F 4 HOH B 32 532 5 HOH HOH . F 4 HOH B 33 533 2 HOH HOH . F 4 HOH B 34 534 27 HOH HOH . F 4 HOH B 35 535 83 HOH HOH . F 4 HOH B 36 536 72 HOH HOH . F 4 HOH B 37 537 35 HOH HOH . F 4 HOH B 38 538 17 HOH HOH . F 4 HOH B 39 539 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 W8F . . . D 3 10.436 0.005 -8.72 0.56 20 0 C7 W8F 402 B 1 HETATM 2 C C8 W8F . . . D 3 9.524 3.857 -5.388 0.56 20 0 C8 W8F 402 B 1 HETATM 3 C C1 W8F . . . D 3 8.42 -0.219 -5.692 0.56 20 0 C1 W8F 402 B 1 HETATM 4 C C5 W8F . . . D 3 9.704 1.662 -6.553 0.56 20 0 C5 W8F 402 B 1 HETATM 5 C C6 W8F . . . D 3 9.282 0.349 -6.654 0.56 20 0 C6 W8F 402 B 1 HETATM 6 C C4 W8F . . . D 3 9.221 2.43 -5.508 0.56 20 0 C4 W8F 402 B 1 HETATM 7 C C3 W8F . . . D 3 8.374 1.88 -4.583 0.56 20 0 C3 W8F 402 B 1 HETATM 8 C C2 W8F . . . D 3 7.981 0.567 -4.669 0.56 20 0 C2 W8F 402 B 1 HETATM 9 N N W8F . . . D 3 11.032 4.07 -5.573 0.56 20 1 N W8F 402 B 1 HETATM 10 O O W8F . . . D 3 9.549 -0.463 -7.722 0.56 20 0 O W8F 402 B 1 HETATM 11 C C W8F . . . D 3 7.994 -1.61 -5.772 0.56 20 0 C W8F 402 B 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #