data_5STO # _model_server_result.job_id '_BVv3L_bIwhgfEIxY0bQGg' _model_server_result.datetime_utc '2024-11-23 22:23:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sto # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5STO # _exptl.entry_id 5STO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 226.315 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description cyclohexyl[4-(hydroxyamino)piperidin-1-yl]methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.52 _cell.angle_gamma 90 _cell.entry_id 5STO _cell.length_a 90.058 _cell.length_b 81.591 _cell.length_c 93.012 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5STO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H22 N2 O2' _chem_comp.formula_weight 226.315 _chem_comp.id W9U _chem_comp.mon_nstd_flag . _chem_comp.name cyclohexyl[4-(hydroxyamino)piperidin-1-yl]methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 W9U sing 376 n n C C5 W9U sing 377 n n C1 C2 W9U sing 378 n n C5 C4 W9U sing 379 n n C2 C3 W9U sing 380 n n C4 C3 W9U sing 381 n n C3 C6 W9U sing 382 n n O C6 W9U doub 383 n n C6 N W9U sing 384 n n N C7 W9U sing 385 n n N C11 W9U sing 386 n n C7 C8 W9U sing 387 n n C11 C10 W9U sing 388 n n C10 C9 W9U sing 389 n n C8 C9 W9U sing 390 n n C9 N1 W9U sing 391 n n N1 O1 W9U sing 392 n n N1 H1 W9U sing 393 n n C7 H2 W9U sing 394 n n C7 H3 W9U sing 395 n n C8 H4 W9U sing 396 n n C8 H5 W9U sing 397 n n C9 H6 W9U sing 398 n n O1 H7 W9U sing 399 n n C1 H8 W9U sing 400 n n C1 H9 W9U sing 401 n n C5 H10 W9U sing 402 n n C5 H11 W9U sing 403 n n C4 H12 W9U sing 404 n n C4 H13 W9U sing 405 n n C3 H14 W9U sing 406 n n C2 H15 W9U sing 407 n n C2 H16 W9U sing 408 n n C H17 W9U sing 409 n n C H18 W9U sing 410 n n C11 H19 W9U sing 411 n n C11 H20 W9U sing 412 n n C10 H21 W9U sing 413 n n C10 H22 W9U sing 414 n n # _atom_sites.entry_id 5STO _atom_sites.fract_transf_matrix[1][1] 0.011104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00372 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011338 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 W9U B 1 401 401 W9U XXX . D 4 HOH A 1 2101 135 HOH HOH . D 4 HOH A 2 2102 51 HOH HOH . D 4 HOH A 3 2103 97 HOH HOH . D 4 HOH A 4 2104 32 HOH HOH . D 4 HOH A 5 2105 60 HOH HOH . D 4 HOH A 6 2106 111 HOH HOH . D 4 HOH A 7 2107 71 HOH HOH . D 4 HOH A 8 2108 3 HOH HOH . D 4 HOH A 9 2109 87 HOH HOH . D 4 HOH A 10 2110 115 HOH HOH . D 4 HOH A 11 2111 38 HOH HOH . D 4 HOH A 12 2112 23 HOH HOH . D 4 HOH A 13 2113 67 HOH HOH . D 4 HOH A 14 2114 42 HOH HOH . D 4 HOH A 15 2115 56 HOH HOH . D 4 HOH A 16 2116 48 HOH HOH . D 4 HOH A 17 2117 2 HOH HOH . D 4 HOH A 18 2118 133 HOH HOH . D 4 HOH A 19 2119 15 HOH HOH . D 4 HOH A 20 2120 86 HOH HOH . D 4 HOH A 21 2121 58 HOH HOH . D 4 HOH A 22 2122 62 HOH HOH . D 4 HOH A 23 2123 9 HOH HOH . D 4 HOH A 24 2124 49 HOH HOH . D 4 HOH A 25 2125 68 HOH HOH . D 4 HOH A 26 2126 21 HOH HOH . D 4 HOH A 27 2127 120 HOH HOH . D 4 HOH A 28 2128 124 HOH HOH . D 4 HOH A 29 2129 45 HOH HOH . D 4 HOH A 30 2130 79 HOH HOH . D 4 HOH A 31 2131 36 HOH HOH . D 4 HOH A 32 2132 105 HOH HOH . D 4 HOH A 33 2133 43 HOH HOH . D 4 HOH A 34 2134 116 HOH HOH . D 4 HOH A 35 2135 27 HOH HOH . D 4 HOH A 36 2136 89 HOH HOH . D 4 HOH A 37 2137 73 HOH HOH . D 4 HOH A 38 2138 5 HOH HOH . D 4 HOH A 39 2139 80 HOH HOH . D 4 HOH A 40 2140 34 HOH HOH . D 4 HOH A 41 2141 96 HOH HOH . D 4 HOH A 42 2142 81 HOH HOH . D 4 HOH A 43 2143 25 HOH HOH . D 4 HOH A 44 2144 88 HOH HOH . D 4 HOH A 45 2145 100 HOH HOH . D 4 HOH A 46 2146 44 HOH HOH . D 4 HOH A 47 2147 98 HOH HOH . D 4 HOH A 48 2148 22 HOH HOH . D 4 HOH A 49 2149 11 HOH HOH . D 4 HOH A 50 2150 94 HOH HOH . D 4 HOH A 51 2151 91 HOH HOH . D 4 HOH A 52 2152 24 HOH HOH . D 4 HOH A 53 2153 17 HOH HOH . D 4 HOH A 54 2154 37 HOH HOH . D 4 HOH A 55 2155 6 HOH HOH . D 4 HOH A 56 2156 63 HOH HOH . D 4 HOH A 57 2157 126 HOH HOH . D 4 HOH A 58 2158 52 HOH HOH . D 4 HOH A 59 2159 14 HOH HOH . D 4 HOH A 60 2160 41 HOH HOH . D 4 HOH A 61 2161 101 HOH HOH . D 4 HOH A 62 2162 50 HOH HOH . D 4 HOH A 63 2163 117 HOH HOH . D 4 HOH A 64 2164 16 HOH HOH . D 4 HOH A 65 2165 119 HOH HOH . D 4 HOH A 66 2166 110 HOH HOH . D 4 HOH A 67 2167 131 HOH HOH . D 4 HOH A 68 2168 103 HOH HOH . D 4 HOH A 69 2169 123 HOH HOH . E 4 HOH B 1 501 127 HOH HOH . E 4 HOH B 2 502 102 HOH HOH . E 4 HOH B 3 503 129 HOH HOH . E 4 HOH B 4 504 35 HOH HOH . E 4 HOH B 5 505 75 HOH HOH . E 4 HOH B 6 506 108 HOH HOH . E 4 HOH B 7 507 78 HOH HOH . E 4 HOH B 8 508 92 HOH HOH . E 4 HOH B 9 509 134 HOH HOH . E 4 HOH B 10 510 10 HOH HOH . E 4 HOH B 11 511 59 HOH HOH . E 4 HOH B 12 512 82 HOH HOH . E 4 HOH B 13 513 64 HOH HOH . E 4 HOH B 14 514 112 HOH HOH . E 4 HOH B 15 515 122 HOH HOH . E 4 HOH B 16 516 72 HOH HOH . E 4 HOH B 17 517 69 HOH HOH . E 4 HOH B 18 518 99 HOH HOH . E 4 HOH B 19 519 8 HOH HOH . E 4 HOH B 20 520 104 HOH HOH . E 4 HOH B 21 521 93 HOH HOH . E 4 HOH B 22 522 19 HOH HOH . E 4 HOH B 23 523 47 HOH HOH . E 4 HOH B 24 524 33 HOH HOH . E 4 HOH B 25 525 121 HOH HOH . E 4 HOH B 26 526 70 HOH HOH . E 4 HOH B 27 527 12 HOH HOH . E 4 HOH B 28 528 28 HOH HOH . E 4 HOH B 29 529 90 HOH HOH . E 4 HOH B 30 530 109 HOH HOH . E 4 HOH B 31 531 66 HOH HOH . E 4 HOH B 32 532 114 HOH HOH . E 4 HOH B 33 533 125 HOH HOH . E 4 HOH B 34 534 84 HOH HOH . E 4 HOH B 35 535 55 HOH HOH . E 4 HOH B 36 536 13 HOH HOH . E 4 HOH B 37 537 65 HOH HOH . E 4 HOH B 38 538 57 HOH HOH . E 4 HOH B 39 539 30 HOH HOH . E 4 HOH B 40 540 29 HOH HOH . E 4 HOH B 41 541 7 HOH HOH . E 4 HOH B 42 542 76 HOH HOH . E 4 HOH B 43 543 26 HOH HOH . E 4 HOH B 44 544 118 HOH HOH . E 4 HOH B 45 545 61 HOH HOH . E 4 HOH B 46 546 39 HOH HOH . E 4 HOH B 47 547 77 HOH HOH . E 4 HOH B 48 548 18 HOH HOH . E 4 HOH B 49 549 113 HOH HOH . E 4 HOH B 50 550 31 HOH HOH . E 4 HOH B 51 551 46 HOH HOH . E 4 HOH B 52 552 53 HOH HOH . E 4 HOH B 53 553 54 HOH HOH . E 4 HOH B 54 554 4 HOH HOH . E 4 HOH B 55 555 132 HOH HOH . E 4 HOH B 56 556 74 HOH HOH . E 4 HOH B 57 557 95 HOH HOH . E 4 HOH B 58 558 107 HOH HOH . E 4 HOH B 59 559 83 HOH HOH . E 4 HOH B 60 560 130 HOH HOH . E 4 HOH B 61 561 20 HOH HOH . E 4 HOH B 62 562 106 HOH HOH . E 4 HOH B 63 563 128 HOH HOH . E 4 HOH B 64 564 40 HOH HOH . E 4 HOH B 65 565 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 W9U . . . C 3 -3.126 13.533 -34.013 0.52 20 0 N1 W9U 401 B 1 HETATM 2 C C7 W9U . . . C 3 -1.624 15.835 -35.962 0.52 20 0 C7 W9U 401 B 1 HETATM 3 C C8 W9U . . . C 3 -1.87 15.455 -34.502 0.52 20 0 C8 W9U 401 B 1 HETATM 4 C C9 W9U . . . C 3 -2.001 13.967 -34.43 0.52 20 0 C9 W9U 401 B 1 HETATM 5 O O1 W9U . . . C 3 -3.223 12.215 -33.955 0.52 20 0 O1 W9U 401 B 1 HETATM 6 C C1 W9U . . . C 3 -0.351 17.398 -40.907 0.52 20 0 C1 W9U 401 B 1 HETATM 7 C C5 W9U . . . C 3 -2.133 15.673 -40.847 0.52 20 0 C5 W9U 401 B 1 HETATM 8 C C6 W9U . . . C 3 0.022 15.342 -37.727 0.52 20 0 C6 W9U 401 B 1 HETATM 9 C C4 W9U . . . C 3 -1.442 15.008 -39.66 0.52 20 0 C4 W9U 401 B 1 HETATM 10 C C3 W9U . . . C 3 -0.71 16.064 -38.833 0.52 20 0 C3 W9U 401 B 1 HETATM 11 C C2 W9U . . . C 3 0.335 16.756 -39.701 0.52 20 0 C2 W9U 401 B 1 HETATM 12 O O W9U . . . C 3 1.184 15.104 -37.813 0.52 20 0 O W9U 401 B 1 HETATM 13 C C W9U . . . C 3 -1.088 16.341 -41.72 0.52 20 0 C W9U 401 B 1 HETATM 14 N N W9U . . . C 3 -0.627 14.938 -36.576 0.52 20 0 N W9U 401 B 1 HETATM 15 C C11 W9U . . . C 3 0.122 14.125 -35.606 0.52 20 0 C11 W9U 401 B 1 HETATM 16 C C10 W9U . . . C 3 -0.816 13.18 -34.86 0.52 20 0 C10 W9U 401 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #