data_5STP # _model_server_result.job_id HCxnzpTQj1xbti23Z-x-NA _model_server_result.datetime_utc '2024-11-13 07:20:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5stp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5STP # _exptl.entry_id 5STP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 187.241 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R)-2-(1H-imidazol-2-yl)-1-phenylethan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.34 _cell.angle_gamma 90 _cell.entry_id 5STP _cell.length_a 88.57 _cell.length_b 82.034 _cell.length_c 93.584 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5STP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H13 N3' _chem_comp.formula_weight 187.241 _chem_comp.id WA0 _chem_comp.mon_nstd_flag . _chem_comp.name (1R)-2-(1H-imidazol-2-yl)-1-phenylethan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 WA0 doub 376 n y C C5 WA0 sing 377 n y C1 C2 WA0 sing 378 n y C5 C4 WA0 doub 379 n y C2 C3 WA0 doub 380 n y C4 C3 WA0 sing 381 n y C3 C6 WA0 sing 382 n n C6 N2 WA0 sing 383 n n C6 C7 WA0 sing 384 n n C7 C8 WA0 sing 385 n n C8 N1 WA0 sing 386 n y C8 N WA0 doub 387 n y N1 C10 WA0 sing 388 n y N C9 WA0 sing 389 n y C10 C9 WA0 doub 390 n y N1 H2 WA0 sing 391 n n C7 H11 WA0 sing 392 n n C7 H12 WA0 sing 393 n n N2 H5 WA0 sing 394 n n N2 H3 WA0 sing 395 n n C9 H13 WA0 sing 396 n n C1 H7 WA0 sing 397 n n C5 H10 WA0 sing 398 n n C6 H WA0 sing 399 n n C4 H9 WA0 sing 400 n n C2 H8 WA0 sing 401 n n C H6 WA0 sing 402 n n C10 H14 WA0 sing 403 n n # _atom_sites.entry_id 5STP _atom_sites.fract_transf_matrix[1][1] 0.011291 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003743 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 WA0 B 1 401 401 WA0 XXX . D 4 HOH A 1 2101 112 HOH HOH . D 4 HOH A 2 2102 32 HOH HOH . D 4 HOH A 3 2103 103 HOH HOH . D 4 HOH A 4 2104 125 HOH HOH . D 4 HOH A 5 2105 5 HOH HOH . D 4 HOH A 6 2106 128 HOH HOH . D 4 HOH A 7 2107 20 HOH HOH . D 4 HOH A 8 2108 69 HOH HOH . D 4 HOH A 9 2109 18 HOH HOH . D 4 HOH A 10 2110 2 HOH HOH . D 4 HOH A 11 2111 93 HOH HOH . D 4 HOH A 12 2112 78 HOH HOH . D 4 HOH A 13 2113 9 HOH HOH . D 4 HOH A 14 2114 85 HOH HOH . D 4 HOH A 15 2115 65 HOH HOH . D 4 HOH A 16 2116 105 HOH HOH . D 4 HOH A 17 2117 117 HOH HOH . D 4 HOH A 18 2118 3 HOH HOH . D 4 HOH A 19 2119 35 HOH HOH . D 4 HOH A 20 2120 57 HOH HOH . D 4 HOH A 21 2121 106 HOH HOH . D 4 HOH A 22 2122 31 HOH HOH . D 4 HOH A 23 2123 124 HOH HOH . D 4 HOH A 24 2124 24 HOH HOH . D 4 HOH A 25 2125 77 HOH HOH . D 4 HOH A 26 2126 25 HOH HOH . D 4 HOH A 27 2127 47 HOH HOH . D 4 HOH A 28 2128 75 HOH HOH . D 4 HOH A 29 2129 42 HOH HOH . D 4 HOH A 30 2130 10 HOH HOH . D 4 HOH A 31 2131 70 HOH HOH . D 4 HOH A 32 2132 15 HOH HOH . D 4 HOH A 33 2133 115 HOH HOH . D 4 HOH A 34 2134 23 HOH HOH . D 4 HOH A 35 2135 6 HOH HOH . D 4 HOH A 36 2136 66 HOH HOH . D 4 HOH A 37 2137 96 HOH HOH . D 4 HOH A 38 2138 41 HOH HOH . D 4 HOH A 39 2139 79 HOH HOH . D 4 HOH A 40 2140 37 HOH HOH . D 4 HOH A 41 2141 80 HOH HOH . D 4 HOH A 42 2142 53 HOH HOH . D 4 HOH A 43 2143 7 HOH HOH . D 4 HOH A 44 2144 107 HOH HOH . D 4 HOH A 45 2145 68 HOH HOH . D 4 HOH A 46 2146 82 HOH HOH . D 4 HOH A 47 2147 100 HOH HOH . D 4 HOH A 48 2148 8 HOH HOH . D 4 HOH A 49 2149 30 HOH HOH . D 4 HOH A 50 2150 89 HOH HOH . D 4 HOH A 51 2151 60 HOH HOH . D 4 HOH A 52 2152 16 HOH HOH . D 4 HOH A 53 2153 87 HOH HOH . D 4 HOH A 54 2154 33 HOH HOH . D 4 HOH A 55 2155 118 HOH HOH . D 4 HOH A 56 2156 131 HOH HOH . D 4 HOH A 57 2157 90 HOH HOH . D 4 HOH A 58 2158 88 HOH HOH . D 4 HOH A 59 2159 49 HOH HOH . D 4 HOH A 60 2160 134 HOH HOH . D 4 HOH A 61 2161 83 HOH HOH . D 4 HOH A 62 2162 119 HOH HOH . D 4 HOH A 63 2163 97 HOH HOH . D 4 HOH A 64 2164 58 HOH HOH . D 4 HOH A 65 2165 127 HOH HOH . D 4 HOH A 66 2166 122 HOH HOH . D 4 HOH A 67 2167 109 HOH HOH . D 4 HOH A 68 2168 102 HOH HOH . D 4 HOH A 69 2169 121 HOH HOH . D 4 HOH A 70 2170 116 HOH HOH . D 4 HOH A 71 2171 86 HOH HOH . E 4 HOH B 1 501 92 HOH HOH . E 4 HOH B 2 502 73 HOH HOH . E 4 HOH B 3 503 84 HOH HOH . E 4 HOH B 4 504 110 HOH HOH . E 4 HOH B 5 505 43 HOH HOH . E 4 HOH B 6 506 91 HOH HOH . E 4 HOH B 7 507 130 HOH HOH . E 4 HOH B 8 508 114 HOH HOH . E 4 HOH B 9 509 62 HOH HOH . E 4 HOH B 10 510 126 HOH HOH . E 4 HOH B 11 511 19 HOH HOH . E 4 HOH B 12 512 4 HOH HOH . E 4 HOH B 13 513 12 HOH HOH . E 4 HOH B 14 514 45 HOH HOH . E 4 HOH B 15 515 17 HOH HOH . E 4 HOH B 16 516 11 HOH HOH . E 4 HOH B 17 517 28 HOH HOH . E 4 HOH B 18 518 133 HOH HOH . E 4 HOH B 19 519 76 HOH HOH . E 4 HOH B 20 520 14 HOH HOH . E 4 HOH B 21 521 71 HOH HOH . E 4 HOH B 22 522 94 HOH HOH . E 4 HOH B 23 523 46 HOH HOH . E 4 HOH B 24 524 39 HOH HOH . E 4 HOH B 25 525 36 HOH HOH . E 4 HOH B 26 526 56 HOH HOH . E 4 HOH B 27 527 101 HOH HOH . E 4 HOH B 28 528 99 HOH HOH . E 4 HOH B 29 529 51 HOH HOH . E 4 HOH B 30 530 50 HOH HOH . E 4 HOH B 31 531 98 HOH HOH . E 4 HOH B 32 532 108 HOH HOH . E 4 HOH B 33 533 95 HOH HOH . E 4 HOH B 34 534 48 HOH HOH . E 4 HOH B 35 535 27 HOH HOH . E 4 HOH B 36 536 38 HOH HOH . E 4 HOH B 37 537 67 HOH HOH . E 4 HOH B 38 538 26 HOH HOH . E 4 HOH B 39 539 129 HOH HOH . E 4 HOH B 40 540 22 HOH HOH . E 4 HOH B 41 541 29 HOH HOH . E 4 HOH B 42 542 72 HOH HOH . E 4 HOH B 43 543 61 HOH HOH . E 4 HOH B 44 544 63 HOH HOH . E 4 HOH B 45 545 123 HOH HOH . E 4 HOH B 46 546 104 HOH HOH . E 4 HOH B 47 547 111 HOH HOH . E 4 HOH B 48 548 113 HOH HOH . E 4 HOH B 49 549 59 HOH HOH . E 4 HOH B 50 550 132 HOH HOH . E 4 HOH B 51 551 34 HOH HOH . E 4 HOH B 52 552 13 HOH HOH . E 4 HOH B 53 553 40 HOH HOH . E 4 HOH B 54 554 44 HOH HOH . E 4 HOH B 55 555 52 HOH HOH . E 4 HOH B 56 556 120 HOH HOH . E 4 HOH B 57 557 74 HOH HOH . E 4 HOH B 58 558 81 HOH HOH . E 4 HOH B 59 559 54 HOH HOH . E 4 HOH B 60 560 55 HOH HOH . E 4 HOH B 61 561 21 HOH HOH . E 4 HOH B 62 562 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 WA0 . . . C 3 9.85 1.148 -6.252 1 30 0 N1 WA0 401 B 1 HETATM 2 C C7 WA0 . . . C 3 10.162 -0.418 -8.177 1 30 0 C7 WA0 401 B 1 HETATM 3 C C8 WA0 . . . C 3 9.682 -0.047 -6.848 1 30 0 C8 WA0 401 B 1 HETATM 4 N N2 WA0 . . . C 3 8.441 1.298 -8.75 1 30 0 N2 WA0 401 B 1 HETATM 5 C C9 WA0 . . . C 3 8.708 -0.101 -4.847 1 30 0 C9 WA0 401 B 1 HETATM 6 C C1 WA0 . . . C 3 11.031 -0.139 -12.434 1 30 0 C1 WA0 401 B 1 HETATM 7 C C5 WA0 . . . C 3 10.794 2.123 -12.283 1 30 0 C5 WA0 401 B 1 HETATM 8 C C6 WA0 . . . C 3 9.367 0.232 -9.301 1 30 0 C6 WA0 401 B 1 HETATM 9 C C4 WA0 . . . C 3 10.218 1.971 -11.063 1 30 0 C4 WA0 401 B 1 HETATM 10 C C3 WA0 . . . C 3 10.178 0.725 -10.486 1 30 0 C3 WA0 401 B 1 HETATM 11 C C2 WA0 . . . C 3 10.682 -0.281 -11.194 1 30 0 C2 WA0 401 B 1 HETATM 12 C C WA0 . . . C 3 11.143 1.078 -13.003 1 30 0 C WA0 401 B 1 HETATM 13 C C10 WA0 . . . C 3 9.247 1.134 -5.02 1 30 0 C10 WA0 401 B 1 HETATM 14 N N WA0 . . . C 3 8.993 -0.822 -5.995 1 30 0 N WA0 401 B 1 HETATM 15 H H1 WA0 . . . C 3 8.725 -1.788 -6.152 1 30 0 H1 WA0 401 B 1 HETATM 16 H H2 WA0 . . . C 3 10.351 1.939 -6.644 1 30 0 H2 WA0 401 B 1 HETATM 17 H H11 WA0 . . . C 3 11.219 -0.204 -8.244 1 30 0 H11 WA0 401 B 1 HETATM 18 H H12 WA0 . . . C 3 10.109 -1.49 -8.283 1 30 0 H12 WA0 401 B 1 HETATM 19 H H5 WA0 . . . C 3 8.069 1.784 -9.552 1 30 0 H5 WA0 401 B 1 HETATM 20 H H3 WA0 . . . C 3 8.94 1.985 -8.199 1 30 0 H3 WA0 401 B 1 HETATM 21 H H13 WA0 . . . C 3 8.131 -0.49 -4.01 1 30 0 H13 WA0 401 B 1 HETATM 22 H H7 WA0 . . . C 3 10.984 -1.036 -13.021 1 30 0 H7 WA0 401 B 1 HETATM 23 H H10 WA0 . . . C 3 11.115 3.105 -12.617 1 30 0 H10 WA0 401 B 1 HETATM 24 H H WA0 . . . C 3 8.664 -0.5 -9.667 1 30 0 H WA0 401 B 1 HETATM 25 H H9 WA0 . . . C 3 9.68 2.833 -10.709 1 30 0 H9 WA0 401 B 1 HETATM 26 H H8 WA0 . . . C 3 10.868 -1.255 -10.751 1 30 0 H8 WA0 401 B 1 HETATM 27 H H6 WA0 . . . C 3 11.486 1.228 -14.014 1 30 0 H6 WA0 401 B 1 HETATM 28 H H14 WA0 . . . C 3 9.216 1.992 -4.354 1 30 0 H14 WA0 401 B 1 HETATM 29 H H4 WA0 . . . C 3 7.675 0.916 -8.208 1 30 0 H4 WA0 401 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #