data_5STR
#
_model_server_result.job_id            yUErwAUXS8eOTt6SxT9Tcw 
_model_server_result.datetime_utc      '2024-11-13 07:19:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5str 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    5STR 
#
_exptl.entry_id    5STR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              204.268 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(1-phenylcyclobutyl)glycinamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.27 
_cell.angle_gamma         90 
_cell.entry_id            5STR 
_cell.length_a            88.627 
_cell.length_b            82.028 
_cell.length_c            93.7 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5STR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C12 H16 N2 O' 
_chem_comp.formula_weight    204.268 
_chem_comp.id                VNU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(1-phenylcyclobutyl)glycinamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 VNU doub 376 n y 
C C5 VNU sing 377 n y 
C1 C2 VNU sing 378 n y 
C5 C4 VNU doub 379 n y 
C2 C3 VNU doub 380 n y 
C4 C3 VNU sing 381 n y 
C3 C6 VNU sing 382 n n 
N1 C11 VNU sing 383 n n 
C6 N VNU sing 384 n n 
C6 C7 VNU sing 385 n n 
C6 C9 VNU sing 386 n n 
C11 C10 VNU sing 387 n n 
N C10 VNU sing 388 n n 
C10 O VNU doub 389 n n 
C7 C8 VNU sing 390 n n 
C9 C8 VNU sing 391 n n 
N1 H1 VNU sing 392 n n 
N1 H2 VNU sing 393 n n 
C7 H4 VNU sing 394 n n 
C7 H5 VNU sing 395 n n 
C8 H6 VNU sing 396 n n 
C8 H7 VNU sing 397 n n 
C9 H8 VNU sing 398 n n 
C9 H9 VNU sing 399 n n 
C1 H10 VNU sing 400 n n 
C5 H11 VNU sing 401 n n 
C4 H12 VNU sing 402 n n 
C2 H13 VNU sing 403 n n 
C11 H14 VNU sing 404 n n 
C11 H15 VNU sing 405 n n 
N H16 VNU sing 406 n n 
C H17 VNU sing 407 n n 
#
_atom_sites.entry_id                     5STR 
_atom_sites.fract_transf_matrix[1][1]    0.011283 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003725 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012191 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011239 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 VNU A 1 2101 2101 VNU XXX . 
D 3 VNU B 1 401 401 VNU XXX . 
E 4 HOH A 1 2201 85 HOH HOH . 
E 4 HOH A 2 2202 96 HOH HOH . 
E 4 HOH A 3 2203 132 HOH HOH . 
E 4 HOH A 4 2204 143 HOH HOH . 
E 4 HOH A 5 2205 104 HOH HOH . 
E 4 HOH A 6 2206 140 HOH HOH . 
E 4 HOH A 7 2207 145 HOH HOH . 
E 4 HOH A 8 2208 8 HOH HOH . 
E 4 HOH A 9 2209 110 HOH HOH . 
E 4 HOH A 10 2210 137 HOH HOH . 
E 4 HOH A 11 2211 17 HOH HOH . 
E 4 HOH A 12 2212 12 HOH HOH . 
E 4 HOH A 13 2213 2 HOH HOH . 
E 4 HOH A 14 2214 123 HOH HOH . 
E 4 HOH A 15 2215 122 HOH HOH . 
E 4 HOH A 16 2216 127 HOH HOH . 
E 4 HOH A 17 2217 48 HOH HOH . 
E 4 HOH A 18 2218 59 HOH HOH . 
E 4 HOH A 19 2219 129 HOH HOH . 
E 4 HOH A 20 2220 6 HOH HOH . 
E 4 HOH A 21 2221 29 HOH HOH . 
E 4 HOH A 22 2222 75 HOH HOH . 
E 4 HOH A 23 2223 4 HOH HOH . 
E 4 HOH A 24 2224 153 HOH HOH . 
E 4 HOH A 25 2225 3 HOH HOH . 
E 4 HOH A 26 2226 73 HOH HOH . 
E 4 HOH A 27 2227 15 HOH HOH . 
E 4 HOH A 28 2228 66 HOH HOH . 
E 4 HOH A 29 2229 11 HOH HOH . 
E 4 HOH A 30 2230 65 HOH HOH . 
E 4 HOH A 31 2231 46 HOH HOH . 
E 4 HOH A 32 2232 107 HOH HOH . 
E 4 HOH A 33 2233 101 HOH HOH . 
E 4 HOH A 34 2234 32 HOH HOH . 
E 4 HOH A 35 2235 108 HOH HOH . 
E 4 HOH A 36 2236 121 HOH HOH . 
E 4 HOH A 37 2237 24 HOH HOH . 
E 4 HOH A 38 2238 37 HOH HOH . 
E 4 HOH A 39 2239 152 HOH HOH . 
E 4 HOH A 40 2240 112 HOH HOH . 
E 4 HOH A 41 2241 14 HOH HOH . 
E 4 HOH A 42 2242 82 HOH HOH . 
E 4 HOH A 43 2243 54 HOH HOH . 
E 4 HOH A 44 2244 80 HOH HOH . 
E 4 HOH A 45 2245 144 HOH HOH . 
E 4 HOH A 46 2246 81 HOH HOH . 
E 4 HOH A 47 2247 22 HOH HOH . 
E 4 HOH A 48 2248 31 HOH HOH . 
E 4 HOH A 49 2249 150 HOH HOH . 
E 4 HOH A 50 2250 58 HOH HOH . 
E 4 HOH A 51 2251 77 HOH HOH . 
E 4 HOH A 52 2252 64 HOH HOH . 
E 4 HOH A 53 2253 44 HOH HOH . 
E 4 HOH A 54 2254 5 HOH HOH . 
E 4 HOH A 55 2255 68 HOH HOH . 
E 4 HOH A 56 2256 49 HOH HOH . 
E 4 HOH A 57 2257 118 HOH HOH . 
E 4 HOH A 58 2258 106 HOH HOH . 
E 4 HOH A 59 2259 50 HOH HOH . 
E 4 HOH A 60 2260 39 HOH HOH . 
E 4 HOH A 61 2261 9 HOH HOH . 
E 4 HOH A 62 2262 98 HOH HOH . 
E 4 HOH A 63 2263 83 HOH HOH . 
E 4 HOH A 64 2264 88 HOH HOH . 
E 4 HOH A 65 2265 76 HOH HOH . 
E 4 HOH A 66 2266 43 HOH HOH . 
E 4 HOH A 67 2267 87 HOH HOH . 
E 4 HOH A 68 2268 16 HOH HOH . 
E 4 HOH A 69 2269 84 HOH HOH . 
E 4 HOH A 70 2270 119 HOH HOH . 
E 4 HOH A 71 2271 28 HOH HOH . 
E 4 HOH A 72 2272 134 HOH HOH . 
E 4 HOH A 73 2273 136 HOH HOH . 
E 4 HOH A 74 2274 61 HOH HOH . 
E 4 HOH A 75 2275 131 HOH HOH . 
E 4 HOH A 76 2276 146 HOH HOH . 
E 4 HOH A 77 2277 113 HOH HOH . 
E 4 HOH A 78 2278 91 HOH HOH . 
E 4 HOH A 79 2279 154 HOH HOH . 
E 4 HOH A 80 2280 93 HOH HOH . 
E 4 HOH A 81 2281 74 HOH HOH . 
F 4 HOH B 1 501 111 HOH HOH . 
F 4 HOH B 2 502 51 HOH HOH . 
F 4 HOH B 3 503 38 HOH HOH . 
F 4 HOH B 4 504 62 HOH HOH . 
F 4 HOH B 5 505 60 HOH HOH . 
F 4 HOH B 6 506 149 HOH HOH . 
F 4 HOH B 7 507 57 HOH HOH . 
F 4 HOH B 8 508 40 HOH HOH . 
F 4 HOH B 9 509 30 HOH HOH . 
F 4 HOH B 10 510 115 HOH HOH . 
F 4 HOH B 11 511 25 HOH HOH . 
F 4 HOH B 12 512 78 HOH HOH . 
F 4 HOH B 13 513 139 HOH HOH . 
F 4 HOH B 14 514 7 HOH HOH . 
F 4 HOH B 15 515 126 HOH HOH . 
F 4 HOH B 16 516 148 HOH HOH . 
F 4 HOH B 17 517 94 HOH HOH . 
F 4 HOH B 18 518 10 HOH HOH . 
F 4 HOH B 19 519 114 HOH HOH . 
F 4 HOH B 20 520 63 HOH HOH . 
F 4 HOH B 21 521 138 HOH HOH . 
F 4 HOH B 22 522 151 HOH HOH . 
F 4 HOH B 23 523 26 HOH HOH . 
F 4 HOH B 24 524 95 HOH HOH . 
F 4 HOH B 25 525 128 HOH HOH . 
F 4 HOH B 26 526 36 HOH HOH . 
F 4 HOH B 27 527 120 HOH HOH . 
F 4 HOH B 28 528 20 HOH HOH . 
F 4 HOH B 29 529 23 HOH HOH . 
F 4 HOH B 30 530 34 HOH HOH . 
F 4 HOH B 31 531 47 HOH HOH . 
F 4 HOH B 32 532 53 HOH HOH . 
F 4 HOH B 33 533 141 HOH HOH . 
F 4 HOH B 34 534 90 HOH HOH . 
F 4 HOH B 35 535 135 HOH HOH . 
F 4 HOH B 36 536 27 HOH HOH . 
F 4 HOH B 37 537 69 HOH HOH . 
F 4 HOH B 38 538 102 HOH HOH . 
F 4 HOH B 39 539 125 HOH HOH . 
F 4 HOH B 40 540 97 HOH HOH . 
F 4 HOH B 41 541 41 HOH HOH . 
F 4 HOH B 42 542 71 HOH HOH . 
F 4 HOH B 43 543 124 HOH HOH . 
F 4 HOH B 44 544 142 HOH HOH . 
F 4 HOH B 45 545 13 HOH HOH . 
F 4 HOH B 46 546 89 HOH HOH . 
F 4 HOH B 47 547 70 HOH HOH . 
F 4 HOH B 48 548 55 HOH HOH . 
F 4 HOH B 49 549 19 HOH HOH . 
F 4 HOH B 50 550 86 HOH HOH . 
F 4 HOH B 51 551 72 HOH HOH . 
F 4 HOH B 52 552 21 HOH HOH . 
F 4 HOH B 53 553 100 HOH HOH . 
F 4 HOH B 54 554 35 HOH HOH . 
F 4 HOH B 55 555 33 HOH HOH . 
F 4 HOH B 56 556 45 HOH HOH . 
F 4 HOH B 57 557 56 HOH HOH . 
F 4 HOH B 58 558 67 HOH HOH . 
F 4 HOH B 59 559 99 HOH HOH . 
F 4 HOH B 60 560 109 HOH HOH . 
F 4 HOH B 61 561 42 HOH HOH . 
F 4 HOH B 62 562 92 HOH HOH . 
F 4 HOH B 63 563 117 HOH HOH . 
F 4 HOH B 64 564 79 HOH HOH . 
F 4 HOH B 65 565 18 HOH HOH . 
F 4 HOH B 66 566 147 HOH HOH . 
F 4 HOH B 67 567 116 HOH HOH . 
F 4 HOH B 68 568 105 HOH HOH . 
F 4 HOH B 69 569 133 HOH HOH . 
F 4 HOH B 70 570 52 HOH HOH . 
F 4 HOH B 71 571 103 HOH HOH . 
F 4 HOH B 72 572 130 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 VNU . . . D 3 20.899 20.565 -12.11 0.44 20 1 N1 VNU 401 B 1 
HETATM 2 C C7 VNU . . . D 3 25.942 19.877 -12.118 0.44 20 0 C7 VNU 401 B 1 
HETATM 3 C C8 VNU . . . D 3 26.954 20.49 -13.096 0.44 20 0 C8 VNU 401 B 1 
HETATM 4 C C9 VNU . . . D 3 26.461 19.55 -14.205 0.44 20 0 C9 VNU 401 B 1 
HETATM 5 C C1 VNU . . . D 3 24.351 15.389 -13.033 0.44 20 0 C1 VNU 401 B 1 
HETATM 6 C C5 VNU . . . D 3 26.416 15.688 -11.872 0.44 20 0 C5 VNU 401 B 1 
HETATM 7 C C6 VNU . . . D 3 25.381 18.98 -13.263 0.44 20 0 C6 VNU 401 B 1 
HETATM 8 C C4 VNU . . . D 3 26.416 17.02 -12.201 0.44 20 0 C4 VNU 401 B 1 
HETATM 9 C C3 VNU . . . D 3 25.38 17.544 -12.946 0.44 20 0 C3 VNU 401 B 1 
HETATM 10 C C2 VNU . . . D 3 24.35 16.732 -13.363 0.44 20 0 C2 VNU 401 B 1 
HETATM 11 O O VNU . . . D 3 23.316 19.686 -11.516 0.44 20 0 O VNU 401 B 1 
HETATM 12 C C10 VNU . . . D 3 23.125 19.648 -12.724 0.44 20 0 C10 VNU 401 B 1 
HETATM 13 C C11 VNU . . . D 3 21.711 20.004 -13.252 0.44 20 0 C11 VNU 401 B 1 
HETATM 14 N N VNU . . . D 3 24.028 19.334 -13.662 0.44 20 0 N VNU 401 B 1 
HETATM 15 C C VNU . . . D 3 25.386 14.861 -12.285 0.44 20 0 C VNU 401 B 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           15 
#