data_5SU0 # _model_server_result.job_id mwq4FGk7Cj_q73TmOlxOaA _model_server_result.datetime_utc '2024-11-27 17:16:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5su0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5SU0 # _exptl.entry_id 5SU0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 149.233 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-phenylbutan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.33 _cell.angle_gamma 90 _cell.entry_id 5SU0 _cell.length_a 89.426 _cell.length_b 81.627 _cell.length_c 93.101 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SU0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H15 N' _chem_comp.formula_weight 149.233 _chem_comp.id VOE _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-phenylbutan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 VOE doub 376 n y C8 C9 VOE sing 377 n y C7 C6 VOE sing 378 n y C9 C4 VOE doub 379 n y C6 C5 VOE doub 380 n y C4 C5 VOE sing 381 n y C4 C2 VOE sing 382 n n C C1 VOE sing 383 n n C2 C1 VOE sing 384 n n C2 C3 VOE sing 385 n n C3 N VOE sing 386 n n C7 H1 VOE sing 387 n n C8 H2 VOE sing 388 n n C9 H3 VOE sing 389 n n C1 H4 VOE sing 390 n n C1 H5 VOE sing 391 n n C5 H6 VOE sing 392 n n C6 H7 VOE sing 393 n n C3 H8 VOE sing 394 n n C3 H9 VOE sing 395 n n C2 H10 VOE sing 396 n n N H11 VOE sing 397 n n N H12 VOE sing 398 n n C H14 VOE sing 399 n n C H15 VOE sing 400 n n C H16 VOE sing 401 n n # _atom_sites.entry_id 5SU0 _atom_sites.fract_transf_matrix[1][1] 0.011182 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003705 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VOE B 1 401 401 VOE XXX . D 4 HOH A 1 2101 52 HOH HOH . D 4 HOH A 2 2102 86 HOH HOH . D 4 HOH A 3 2103 46 HOH HOH . D 4 HOH A 4 2104 69 HOH HOH . D 4 HOH A 5 2105 101 HOH HOH . D 4 HOH A 6 2106 132 HOH HOH . D 4 HOH A 7 2107 20 HOH HOH . D 4 HOH A 8 2108 2 HOH HOH . D 4 HOH A 9 2109 8 HOH HOH . D 4 HOH A 10 2110 105 HOH HOH . D 4 HOH A 11 2111 68 HOH HOH . D 4 HOH A 12 2112 27 HOH HOH . D 4 HOH A 13 2113 24 HOH HOH . D 4 HOH A 14 2114 17 HOH HOH . D 4 HOH A 15 2115 107 HOH HOH . D 4 HOH A 16 2116 117 HOH HOH . D 4 HOH A 17 2117 7 HOH HOH . D 4 HOH A 18 2118 128 HOH HOH . D 4 HOH A 19 2119 94 HOH HOH . D 4 HOH A 20 2120 95 HOH HOH . D 4 HOH A 21 2121 81 HOH HOH . D 4 HOH A 22 2122 15 HOH HOH . D 4 HOH A 23 2123 134 HOH HOH . D 4 HOH A 24 2124 93 HOH HOH . D 4 HOH A 25 2125 56 HOH HOH . D 4 HOH A 26 2126 80 HOH HOH . D 4 HOH A 27 2127 45 HOH HOH . D 4 HOH A 28 2128 51 HOH HOH . D 4 HOH A 29 2129 73 HOH HOH . D 4 HOH A 30 2130 116 HOH HOH . D 4 HOH A 31 2131 41 HOH HOH . D 4 HOH A 32 2132 115 HOH HOH . D 4 HOH A 33 2133 47 HOH HOH . D 4 HOH A 34 2134 100 HOH HOH . D 4 HOH A 35 2135 77 HOH HOH . D 4 HOH A 36 2136 83 HOH HOH . D 4 HOH A 37 2137 79 HOH HOH . D 4 HOH A 38 2138 106 HOH HOH . D 4 HOH A 39 2139 29 HOH HOH . D 4 HOH A 40 2140 3 HOH HOH . D 4 HOH A 41 2141 26 HOH HOH . D 4 HOH A 42 2142 58 HOH HOH . D 4 HOH A 43 2143 40 HOH HOH . D 4 HOH A 44 2144 53 HOH HOH . D 4 HOH A 45 2145 50 HOH HOH . D 4 HOH A 46 2146 114 HOH HOH . D 4 HOH A 47 2147 96 HOH HOH . D 4 HOH A 48 2148 78 HOH HOH . D 4 HOH A 49 2149 123 HOH HOH . D 4 HOH A 50 2150 21 HOH HOH . D 4 HOH A 51 2151 14 HOH HOH . D 4 HOH A 52 2152 98 HOH HOH . D 4 HOH A 53 2153 59 HOH HOH . D 4 HOH A 54 2154 84 HOH HOH . D 4 HOH A 55 2155 32 HOH HOH . D 4 HOH A 56 2156 118 HOH HOH . D 4 HOH A 57 2157 13 HOH HOH . D 4 HOH A 58 2158 71 HOH HOH . D 4 HOH A 59 2159 30 HOH HOH . D 4 HOH A 60 2160 61 HOH HOH . D 4 HOH A 61 2161 63 HOH HOH . D 4 HOH A 62 2162 34 HOH HOH . D 4 HOH A 63 2163 6 HOH HOH . D 4 HOH A 64 2164 35 HOH HOH . D 4 HOH A 65 2165 97 HOH HOH . D 4 HOH A 66 2166 102 HOH HOH . D 4 HOH A 67 2167 126 HOH HOH . D 4 HOH A 68 2168 19 HOH HOH . D 4 HOH A 69 2169 90 HOH HOH . D 4 HOH A 70 2170 72 HOH HOH . D 4 HOH A 71 2171 110 HOH HOH . D 4 HOH A 72 2172 82 HOH HOH . D 4 HOH A 73 2173 85 HOH HOH . E 4 HOH B 1 501 131 HOH HOH . E 4 HOH B 2 502 135 HOH HOH . E 4 HOH B 3 503 43 HOH HOH . E 4 HOH B 4 504 109 HOH HOH . E 4 HOH B 5 505 133 HOH HOH . E 4 HOH B 6 506 4 HOH HOH . E 4 HOH B 7 507 70 HOH HOH . E 4 HOH B 8 508 76 HOH HOH . E 4 HOH B 9 509 54 HOH HOH . E 4 HOH B 10 510 55 HOH HOH . E 4 HOH B 11 511 31 HOH HOH . E 4 HOH B 12 512 89 HOH HOH . E 4 HOH B 13 513 9 HOH HOH . E 4 HOH B 14 514 33 HOH HOH . E 4 HOH B 15 515 130 HOH HOH . E 4 HOH B 16 516 12 HOH HOH . E 4 HOH B 17 517 87 HOH HOH . E 4 HOH B 18 518 99 HOH HOH . E 4 HOH B 19 519 57 HOH HOH . E 4 HOH B 20 520 111 HOH HOH . E 4 HOH B 21 521 74 HOH HOH . E 4 HOH B 22 522 62 HOH HOH . E 4 HOH B 23 523 10 HOH HOH . E 4 HOH B 24 524 120 HOH HOH . E 4 HOH B 25 525 88 HOH HOH . E 4 HOH B 26 526 25 HOH HOH . E 4 HOH B 27 527 119 HOH HOH . E 4 HOH B 28 528 92 HOH HOH . E 4 HOH B 29 529 104 HOH HOH . E 4 HOH B 30 530 36 HOH HOH . E 4 HOH B 31 531 11 HOH HOH . E 4 HOH B 32 532 16 HOH HOH . E 4 HOH B 33 533 60 HOH HOH . E 4 HOH B 34 534 42 HOH HOH . E 4 HOH B 35 535 103 HOH HOH . E 4 HOH B 36 536 125 HOH HOH . E 4 HOH B 37 537 65 HOH HOH . E 4 HOH B 38 538 23 HOH HOH . E 4 HOH B 39 539 113 HOH HOH . E 4 HOH B 40 540 48 HOH HOH . E 4 HOH B 41 541 39 HOH HOH . E 4 HOH B 42 542 44 HOH HOH . E 4 HOH B 43 543 108 HOH HOH . E 4 HOH B 44 544 122 HOH HOH . E 4 HOH B 45 545 75 HOH HOH . E 4 HOH B 46 546 124 HOH HOH . E 4 HOH B 47 547 18 HOH HOH . E 4 HOH B 48 548 28 HOH HOH . E 4 HOH B 49 549 66 HOH HOH . E 4 HOH B 50 550 37 HOH HOH . E 4 HOH B 51 551 22 HOH HOH . E 4 HOH B 52 552 67 HOH HOH . E 4 HOH B 53 553 38 HOH HOH . E 4 HOH B 54 554 5 HOH HOH . E 4 HOH B 55 555 49 HOH HOH . E 4 HOH B 56 556 112 HOH HOH . E 4 HOH B 57 557 129 HOH HOH . E 4 HOH B 58 558 127 HOH HOH . E 4 HOH B 59 559 91 HOH HOH . E 4 HOH B 60 560 64 HOH HOH . E 4 HOH B 61 561 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 VOE . . . C 3 1.014 14.033 -37.187 0.38 20 0 C7 VOE 401 B 1 HETATM 2 C C8 VOE . . . C 3 0.014 14.857 -37.664 0.38 20 0 C8 VOE 401 B 1 HETATM 3 C C9 VOE . . . C 3 -1.169 14.993 -36.961 0.38 20 0 C9 VOE 401 B 1 HETATM 4 C C1 VOE . . . C 3 -2.793 13.034 -34.287 0.38 20 0 C1 VOE 401 B 1 HETATM 5 C C5 VOE . . . C 3 -0.341 13.509 -35.291 0.38 20 0 C5 VOE 401 B 1 HETATM 6 C C6 VOE . . . C 3 0.839 13.367 -36 0.38 20 0 C6 VOE 401 B 1 HETATM 7 C C4 VOE . . . C 3 -1.366 14.314 -35.77 0.38 20 0 C4 VOE 401 B 1 HETATM 8 C C3 VOE . . . C 3 -2.763 15.472 -34.022 0.38 20 0 C3 VOE 401 B 1 HETATM 9 C C2 VOE . . . C 3 -2.698 14.352 -35.055 0.38 20 0 C2 VOE 401 B 1 HETATM 10 N N VOE . . . C 3 -3.869 15.145 -33.126 0.38 20 0 N VOE 401 B 1 HETATM 11 C C VOE . . . C 3 -2.84 11.797 -35.156 0.38 20 0 C VOE 401 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #