data_5SU9 # _model_server_result.job_id GYi4JKJLJN7oVbTH-OLdiA _model_server_result.datetime_utc '2024-11-23 05:07:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5su9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5SU9 # _exptl.entry_id 5SU9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 234.337 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~-methyl-N~2~-[2-methyl-2-(4-methylphenyl)propyl]glycinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.54 _cell.angle_gamma 90 _cell.entry_id 5SU9 _cell.length_a 88.443 _cell.length_b 81.836 _cell.length_c 93.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H22 N2 O' _chem_comp.formula_weight 234.337 _chem_comp.id V4L _chem_comp.mon_nstd_flag . _chem_comp.name N~2~-methyl-N~2~-[2-methyl-2-(4-methylphenyl)propyl]glycinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C13 V4L sing 358 n n C13 O V4L doub 359 n n C13 C12 V4L sing 360 n n C12 N V4L sing 361 n n C11 N V4L sing 362 n n N C10 V4L sing 363 n n C10 C7 V4L sing 364 n n C8 C7 V4L sing 365 n n C7 C9 V4L sing 366 n n C7 C4 V4L sing 367 n n C4 C5 V4L doub 368 n y C4 C3 V4L sing 369 n y C5 C6 V4L sing 370 n y C3 C2 V4L doub 371 n y C6 C1 V4L doub 372 n y C2 C1 V4L sing 373 n y C1 C V4L sing 374 n n N1 H22 V4L sing 375 n n N1 H21 V4L sing 376 n n C8 H8 V4L sing 377 n n C8 H9 V4L sing 378 n n C8 H10 V4L sing 379 n n C9 H12 V4L sing 380 n n C9 H13 V4L sing 381 n n C9 H11 V4L sing 382 n n C5 H6 V4L sing 383 n n C6 H7 V4L sing 384 n n C3 H5 V4L sing 385 n n C2 H4 V4L sing 386 n n C12 H20 V4L sing 387 n n C12 H19 V4L sing 388 n n C11 H18 V4L sing 389 n n C11 H16 V4L sing 390 n n C11 H17 V4L sing 391 n n C10 H14 V4L sing 392 n n C10 H15 V4L sing 393 n n C H1 V4L sing 394 n n C H2 V4L sing 395 n n C H3 V4L sing 396 n n # _atom_sites.entry_id 5SU9 _atom_sites.fract_transf_matrix[1][1] 0.011307 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003792 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01222 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 V4L B 1 401 401 V4L XXX . D 4 HOH A 1 2101 96 HOH HOH . D 4 HOH A 2 2102 104 HOH HOH . D 4 HOH A 3 2103 39 HOH HOH . D 4 HOH A 4 2104 26 HOH HOH . D 4 HOH A 5 2105 69 HOH HOH . D 4 HOH A 6 2106 89 HOH HOH . D 4 HOH A 7 2107 62 HOH HOH . D 4 HOH A 8 2108 29 HOH HOH . D 4 HOH A 9 2109 108 HOH HOH . D 4 HOH A 10 2110 91 HOH HOH . D 4 HOH A 11 2111 77 HOH HOH . D 4 HOH A 12 2112 2 HOH HOH . D 4 HOH A 13 2113 38 HOH HOH . D 4 HOH A 14 2114 13 HOH HOH . D 4 HOH A 15 2115 54 HOH HOH . D 4 HOH A 16 2116 6 HOH HOH . D 4 HOH A 17 2117 50 HOH HOH . D 4 HOH A 18 2118 40 HOH HOH . D 4 HOH A 19 2119 3 HOH HOH . D 4 HOH A 20 2120 9 HOH HOH . D 4 HOH A 21 2121 21 HOH HOH . D 4 HOH A 22 2122 55 HOH HOH . D 4 HOH A 23 2123 59 HOH HOH . D 4 HOH A 24 2124 33 HOH HOH . D 4 HOH A 25 2125 23 HOH HOH . D 4 HOH A 26 2126 106 HOH HOH . D 4 HOH A 27 2127 8 HOH HOH . D 4 HOH A 28 2128 31 HOH HOH . D 4 HOH A 29 2129 20 HOH HOH . D 4 HOH A 30 2130 5 HOH HOH . D 4 HOH A 31 2131 57 HOH HOH . D 4 HOH A 32 2132 67 HOH HOH . D 4 HOH A 33 2133 7 HOH HOH . D 4 HOH A 34 2134 25 HOH HOH . D 4 HOH A 35 2135 90 HOH HOH . D 4 HOH A 36 2136 78 HOH HOH . D 4 HOH A 37 2137 18 HOH HOH . D 4 HOH A 38 2138 95 HOH HOH . D 4 HOH A 39 2139 94 HOH HOH . D 4 HOH A 40 2140 52 HOH HOH . D 4 HOH A 41 2141 86 HOH HOH . D 4 HOH A 42 2142 61 HOH HOH . D 4 HOH A 43 2143 74 HOH HOH . D 4 HOH A 44 2144 56 HOH HOH . D 4 HOH A 45 2145 30 HOH HOH . D 4 HOH A 46 2146 19 HOH HOH . D 4 HOH A 47 2147 81 HOH HOH . D 4 HOH A 48 2148 70 HOH HOH . D 4 HOH A 49 2149 93 HOH HOH . D 4 HOH A 50 2150 36 HOH HOH . D 4 HOH A 51 2151 45 HOH HOH . D 4 HOH A 52 2152 84 HOH HOH . D 4 HOH A 53 2153 100 HOH HOH . D 4 HOH A 54 2154 102 HOH HOH . D 4 HOH A 55 2155 80 HOH HOH . D 4 HOH A 56 2156 79 HOH HOH . E 4 HOH B 1 501 103 HOH HOH . E 4 HOH B 2 502 51 HOH HOH . E 4 HOH B 3 503 88 HOH HOH . E 4 HOH B 4 504 66 HOH HOH . E 4 HOH B 5 505 72 HOH HOH . E 4 HOH B 6 506 98 HOH HOH . E 4 HOH B 7 507 37 HOH HOH . E 4 HOH B 8 508 32 HOH HOH . E 4 HOH B 9 509 75 HOH HOH . E 4 HOH B 10 510 68 HOH HOH . E 4 HOH B 11 511 92 HOH HOH . E 4 HOH B 12 512 42 HOH HOH . E 4 HOH B 13 513 105 HOH HOH . E 4 HOH B 14 514 17 HOH HOH . E 4 HOH B 15 515 109 HOH HOH . E 4 HOH B 16 516 99 HOH HOH . E 4 HOH B 17 517 53 HOH HOH . E 4 HOH B 18 518 73 HOH HOH . E 4 HOH B 19 519 10 HOH HOH . E 4 HOH B 20 520 83 HOH HOH . E 4 HOH B 21 521 63 HOH HOH . E 4 HOH B 22 522 65 HOH HOH . E 4 HOH B 23 523 12 HOH HOH . E 4 HOH B 24 524 44 HOH HOH . E 4 HOH B 25 525 101 HOH HOH . E 4 HOH B 26 526 34 HOH HOH . E 4 HOH B 27 527 24 HOH HOH . E 4 HOH B 28 528 87 HOH HOH . E 4 HOH B 29 529 58 HOH HOH . E 4 HOH B 30 530 22 HOH HOH . E 4 HOH B 31 531 11 HOH HOH . E 4 HOH B 32 532 85 HOH HOH . E 4 HOH B 33 533 71 HOH HOH . E 4 HOH B 34 534 28 HOH HOH . E 4 HOH B 35 535 48 HOH HOH . E 4 HOH B 36 536 43 HOH HOH . E 4 HOH B 37 537 46 HOH HOH . E 4 HOH B 38 538 60 HOH HOH . E 4 HOH B 39 539 16 HOH HOH . E 4 HOH B 40 540 15 HOH HOH . E 4 HOH B 41 541 27 HOH HOH . E 4 HOH B 42 542 47 HOH HOH . E 4 HOH B 43 543 35 HOH HOH . E 4 HOH B 44 544 14 HOH HOH . E 4 HOH B 45 545 76 HOH HOH . E 4 HOH B 46 546 107 HOH HOH . E 4 HOH B 47 547 4 HOH HOH . E 4 HOH B 48 548 41 HOH HOH . E 4 HOH B 49 549 49 HOH HOH . E 4 HOH B 50 550 82 HOH HOH . E 4 HOH B 51 551 64 HOH HOH . E 4 HOH B 52 552 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 V4L . . . C 3 12.995 14.04 -48.367 1 30 0 N1 V4L 401 B 1 HETATM 2 C C7 V4L . . . C 3 14.595 12.934 -43.167 1 30 0 C7 V4L 401 B 1 HETATM 3 C C8 V4L . . . C 3 13.38 13.665 -43.675 1 30 0 C8 V4L 401 B 1 HETATM 4 C C9 V4L . . . C 3 14.162 11.598 -42.788 1 30 0 C9 V4L 401 B 1 HETATM 5 C C1 V4L . . . C 3 16.958 14.605 -40.123 1 30 0 C1 V4L 401 B 1 HETATM 6 C C5 V4L . . . C 3 15.263 14.8 -41.625 1 30 0 C5 V4L 401 B 1 HETATM 7 C C6 V4L . . . C 3 16.024 15.295 -40.689 1 30 0 C6 V4L 401 B 1 HETATM 8 C C4 V4L . . . C 3 15.435 13.531 -42.065 1 30 0 C4 V4L 401 B 1 HETATM 9 C C3 V4L . . . C 3 16.431 12.804 -41.462 1 30 0 C3 V4L 401 B 1 HETATM 10 C C2 V4L . . . C 3 17.145 13.344 -40.491 1 30 0 C2 V4L 401 B 1 HETATM 11 O O V4L . . . C 3 12.773 12.309 -47.103 1 30 0 O V4L 401 B 1 HETATM 12 C C13 V4L . . . C 3 13.36 13.264 -47.365 1 30 0 C13 V4L 401 B 1 HETATM 13 C C12 V4L . . . C 3 14.545 13.682 -46.559 1 30 0 C12 V4L 401 B 1 HETATM 14 N N V4L . . . C 3 14.895 12.531 -45.598 1 30 0 N V4L 401 B 1 HETATM 15 C C11 V4L . . . C 3 15.739 11.594 -46.313 1 30 0 C11 V4L 401 B 1 HETATM 16 C C10 V4L . . . C 3 15.52 13.045 -44.368 1 30 0 C10 V4L 401 B 1 HETATM 17 C C V4L . . . C 3 17.79 15.359 -39.15 1 30 0 C V4L 401 B 1 HETATM 18 H H22 V4L . . . C 3 12.203 13.836 -48.968 1 30 0 H22 V4L 401 B 1 HETATM 19 H H21 V4L . . . C 3 13.509 14.89 -48.574 1 30 0 H21 V4L 401 B 1 HETATM 20 H H8 V4L . . . C 3 12.946 13.225 -44.572 1 30 0 H8 V4L 401 B 1 HETATM 21 H H9 V4L . . . C 3 13.603 14.701 -43.893 1 30 0 H9 V4L 401 B 1 HETATM 22 H H10 V4L . . . C 3 12.591 13.68 -42.925 1 30 0 H10 V4L 401 B 1 HETATM 23 H H12 V4L . . . C 3 13.622 11.064 -43.569 1 30 0 H12 V4L 401 B 1 HETATM 24 H H13 V4L . . . C 3 13.537 11.591 -41.897 1 30 0 H13 V4L 401 B 1 HETATM 25 H H11 V4L . . . C 3 15.021 10.977 -42.536 1 30 0 H11 V4L 401 B 1 HETATM 26 H H6 V4L . . . C 3 14.518 15.513 -41.958 1 30 0 H6 V4L 401 B 1 HETATM 27 H H7 V4L . . . C 3 15.88 16.32 -40.394 1 30 0 H7 V4L 401 B 1 HETATM 28 H H5 V4L . . . C 3 16.748 11.81 -41.773 1 30 0 H5 V4L 401 B 1 HETATM 29 H H4 V4L . . . C 3 17.897 12.739 -39.987 1 30 0 H4 V4L 401 B 1 HETATM 30 H H20 V4L . . . C 3 14.34 14.596 -46.003 1 30 0 H20 V4L 401 B 1 HETATM 31 H H19 V4L . . . C 3 15.389 13.915 -47.207 1 30 0 H19 V4L 401 B 1 HETATM 32 H H18 V4L . . . C 3 16.049 11.995 -47.277 1 30 0 H18 V4L 401 B 1 HETATM 33 H H16 V4L . . . C 3 15.223 10.652 -46.49 1 30 0 H16 V4L 401 B 1 HETATM 34 H H17 V4L . . . C 3 16.652 11.358 -45.769 1 30 0 H17 V4L 401 B 1 HETATM 35 H H14 V4L . . . C 3 15.83 14.078 -44.522 1 30 0 H14 V4L 401 B 1 HETATM 36 H H15 V4L . . . C 3 16.427 12.479 -44.164 1 30 0 H15 V4L 401 B 1 HETATM 37 H H1 V4L . . . C 3 17.376 16.342 -38.962 1 30 0 H1 V4L 401 B 1 HETATM 38 H H2 V4L . . . C 3 18.814 15.503 -39.49 1 30 0 H2 V4L 401 B 1 HETATM 39 H H3 V4L . . . C 3 17.851 14.848 -38.19 1 30 0 H3 V4L 401 B 1 HETATM 40 H H V4L . . . C 3 14.05 12.032 -45.342 1 30 0 H V4L 401 B 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 40 #