data_5SUB
#
_model_server_result.job_id            np7GD4lonvs-dNKfs_KGfQ 
_model_server_result.datetime_utc      '2024-11-15 05:45:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5sub 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":2101}' 
#
_entry.id    5SUB 
#
_exptl.entry_id    5SUB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              224.275 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-2-amino-N-[(2-fluorophenyl)methyl]-N-methylbutanamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.42 
_cell.angle_gamma         90 
_cell.entry_id            5SUB 
_cell.length_a            88.627 
_cell.length_b            82.049 
_cell.length_c            94.132 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5SUB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C12 H17 F N2 O' 
_chem_comp.formula_weight    224.275 
_chem_comp.id                V6R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-2-amino-N-[(2-fluorophenyl)methyl]-N-methylbutanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C9 C8 V6R doub 358 n y 
C9 C10 V6R sing 359 n y 
C8 C7 V6R sing 360 n y 
C10 C11 V6R doub 361 n y 
C7 C6 V6R doub 362 n y 
C11 C6 V6R sing 363 n y 
C11 F V6R sing 364 n n 
C6 C5 V6R sing 365 n n 
C5 N V6R sing 366 n n 
N C4 V6R sing 367 n n 
N C3 V6R sing 368 n n 
O C3 V6R doub 369 n n 
C3 C2 V6R sing 370 n n 
N1 C2 V6R sing 371 n n 
C2 C1 V6R sing 372 n n 
C1 C V6R sing 373 n n 
N1 H1 V6R sing 374 n n 
N1 H2 V6R sing 375 n n 
C7 H4 V6R sing 376 n n 
C8 H5 V6R sing 377 n n 
C9 H6 V6R sing 378 n n 
C1 H7 V6R sing 379 n n 
C1 H8 V6R sing 380 n n 
C5 H9 V6R sing 381 n n 
C5 H10 V6R sing 382 n n 
C4 H11 V6R sing 383 n n 
C4 H12 V6R sing 384 n n 
C4 H13 V6R sing 385 n n 
C2 H14 V6R sing 386 n n 
C10 H15 V6R sing 387 n n 
C H16 V6R sing 388 n n 
C H17 V6R sing 389 n n 
C H18 V6R sing 390 n n 
#
_atom_sites.entry_id                     5SUB 
_atom_sites.fract_transf_matrix[1][1]    0.011283 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003758 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012188 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011197 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 V6R A 1 2101 2101 V6R XXX . 
D 3 V6R B 1 401 401 V6R XXX . 
E 3 V6R B 1 402 501 V6R XXX . 
F 4 HOH A 1 2201 80 HOH HOH . 
F 4 HOH A 2 2202 69 HOH HOH . 
F 4 HOH A 3 2203 73 HOH HOH . 
F 4 HOH A 4 2204 79 HOH HOH . 
F 4 HOH A 5 2205 84 HOH HOH . 
F 4 HOH A 6 2206 121 HOH HOH . 
F 4 HOH A 7 2207 27 HOH HOH . 
F 4 HOH A 8 2208 13 HOH HOH . 
F 4 HOH A 9 2209 2 HOH HOH . 
F 4 HOH A 10 2210 20 HOH HOH . 
F 4 HOH A 11 2211 115 HOH HOH . 
F 4 HOH A 12 2212 82 HOH HOH . 
F 4 HOH A 13 2213 23 HOH HOH . 
F 4 HOH A 14 2214 71 HOH HOH . 
F 4 HOH A 15 2215 9 HOH HOH . 
F 4 HOH A 16 2216 15 HOH HOH . 
F 4 HOH A 17 2217 5 HOH HOH . 
F 4 HOH A 18 2218 3 HOH HOH . 
F 4 HOH A 19 2219 31 HOH HOH . 
F 4 HOH A 20 2220 51 HOH HOH . 
F 4 HOH A 21 2221 4 HOH HOH . 
F 4 HOH A 22 2222 64 HOH HOH . 
F 4 HOH A 23 2223 12 HOH HOH . 
F 4 HOH A 24 2224 18 HOH HOH . 
F 4 HOH A 25 2225 77 HOH HOH . 
F 4 HOH A 26 2226 120 HOH HOH . 
F 4 HOH A 27 2227 108 HOH HOH . 
F 4 HOH A 28 2228 105 HOH HOH . 
F 4 HOH A 29 2229 93 HOH HOH . 
F 4 HOH A 30 2230 44 HOH HOH . 
F 4 HOH A 31 2231 42 HOH HOH . 
F 4 HOH A 32 2232 11 HOH HOH . 
F 4 HOH A 33 2233 21 HOH HOH . 
F 4 HOH A 34 2234 28 HOH HOH . 
F 4 HOH A 35 2235 67 HOH HOH . 
F 4 HOH A 36 2236 86 HOH HOH . 
F 4 HOH A 37 2237 49 HOH HOH . 
F 4 HOH A 38 2238 122 HOH HOH . 
F 4 HOH A 39 2239 39 HOH HOH . 
F 4 HOH A 40 2240 81 HOH HOH . 
F 4 HOH A 41 2241 7 HOH HOH . 
F 4 HOH A 42 2242 26 HOH HOH . 
F 4 HOH A 43 2243 32 HOH HOH . 
F 4 HOH A 44 2244 8 HOH HOH . 
F 4 HOH A 45 2245 87 HOH HOH . 
F 4 HOH A 46 2246 68 HOH HOH . 
F 4 HOH A 47 2247 59 HOH HOH . 
F 4 HOH A 48 2248 103 HOH HOH . 
F 4 HOH A 49 2249 61 HOH HOH . 
F 4 HOH A 50 2250 78 HOH HOH . 
F 4 HOH A 51 2251 35 HOH HOH . 
F 4 HOH A 52 2252 98 HOH HOH . 
F 4 HOH A 53 2253 33 HOH HOH . 
F 4 HOH A 54 2254 92 HOH HOH . 
F 4 HOH A 55 2255 62 HOH HOH . 
F 4 HOH A 56 2256 72 HOH HOH . 
F 4 HOH A 57 2257 110 HOH HOH . 
F 4 HOH A 58 2258 55 HOH HOH . 
F 4 HOH A 59 2259 6 HOH HOH . 
F 4 HOH A 60 2260 48 HOH HOH . 
F 4 HOH A 61 2261 47 HOH HOH . 
F 4 HOH A 62 2262 54 HOH HOH . 
F 4 HOH A 63 2263 66 HOH HOH . 
F 4 HOH A 64 2264 112 HOH HOH . 
F 4 HOH A 65 2265 106 HOH HOH . 
F 4 HOH A 66 2266 104 HOH HOH . 
F 4 HOH A 67 2267 90 HOH HOH . 
G 4 HOH B 1 501 102 HOH HOH . 
G 4 HOH B 2 502 63 HOH HOH . 
G 4 HOH B 3 503 97 HOH HOH . 
G 4 HOH B 4 504 114 HOH HOH . 
G 4 HOH B 5 505 76 HOH HOH . 
G 4 HOH B 6 506 117 HOH HOH . 
G 4 HOH B 7 507 74 HOH HOH . 
G 4 HOH B 8 508 36 HOH HOH . 
G 4 HOH B 9 509 109 HOH HOH . 
G 4 HOH B 10 510 45 HOH HOH . 
G 4 HOH B 11 511 57 HOH HOH . 
G 4 HOH B 12 512 22 HOH HOH . 
G 4 HOH B 13 513 116 HOH HOH . 
G 4 HOH B 14 514 25 HOH HOH . 
G 4 HOH B 15 515 19 HOH HOH . 
G 4 HOH B 16 516 65 HOH HOH . 
G 4 HOH B 17 517 91 HOH HOH . 
G 4 HOH B 18 518 37 HOH HOH . 
G 4 HOH B 19 519 41 HOH HOH . 
G 4 HOH B 20 520 96 HOH HOH . 
G 4 HOH B 21 521 16 HOH HOH . 
G 4 HOH B 22 522 119 HOH HOH . 
G 4 HOH B 23 523 53 HOH HOH . 
G 4 HOH B 24 524 99 HOH HOH . 
G 4 HOH B 25 525 83 HOH HOH . 
G 4 HOH B 26 526 46 HOH HOH . 
G 4 HOH B 27 527 14 HOH HOH . 
G 4 HOH B 28 528 89 HOH HOH . 
G 4 HOH B 29 529 34 HOH HOH . 
G 4 HOH B 30 530 24 HOH HOH . 
G 4 HOH B 31 531 88 HOH HOH . 
G 4 HOH B 32 532 100 HOH HOH . 
G 4 HOH B 33 533 60 HOH HOH . 
G 4 HOH B 34 534 43 HOH HOH . 
G 4 HOH B 35 535 75 HOH HOH . 
G 4 HOH B 36 536 111 HOH HOH . 
G 4 HOH B 37 537 17 HOH HOH . 
G 4 HOH B 38 538 56 HOH HOH . 
G 4 HOH B 39 539 118 HOH HOH . 
G 4 HOH B 40 540 113 HOH HOH . 
G 4 HOH B 41 541 52 HOH HOH . 
G 4 HOH B 42 542 58 HOH HOH . 
G 4 HOH B 43 543 29 HOH HOH . 
G 4 HOH B 44 544 38 HOH HOH . 
G 4 HOH B 45 545 50 HOH HOH . 
G 4 HOH B 46 546 101 HOH HOH . 
G 4 HOH B 47 547 40 HOH HOH . 
G 4 HOH B 48 548 107 HOH HOH . 
G 4 HOH B 49 549 85 HOH HOH . 
G 4 HOH B 50 550 95 HOH HOH . 
G 4 HOH B 51 551 70 HOH HOH . 
G 4 HOH B 52 552 30 HOH HOH . 
G 4 HOH B 53 553 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 V6R . . . C 3 30.617 15.077 43.289 0.38 20 1 N1 V6R 2101 A 1 
HETATM 2 C C7 V6R . . . C 3 26.705 16.026 38.914 0.38 20 0 C7 V6R 2101 A 1 
HETATM 3 C C8 V6R . . . C 3 26.861 15.215 37.8 0.38 20 0 C8 V6R 2101 A 1 
HETATM 4 C C9 V6R . . . C 3 28.119 14.909 37.3 0.38 20 0 C9 V6R 2101 A 1 
HETATM 5 C C1 V6R . . . C 3 30.408 17.063 44.808 0.38 20 0 C1 V6R 2101 A 1 
HETATM 6 C C5 V6R . . . C 3 27.672 17.408 40.718 0.38 20 0 C5 V6R 2101 A 1 
HETATM 7 C C6 V6R . . . C 3 27.822 16.536 39.526 0.38 20 0 C6 V6R 2101 A 1 
HETATM 8 C C4 V6R . . . C 3 27.718 15.223 41.948 0.38 20 0 C4 V6R 2101 A 1 
HETATM 9 C C3 V6R . . . C 3 29.205 17.026 42.638 0.38 20 0 C3 V6R 2101 A 1 
HETATM 10 C C2 V6R . . . C 3 29.654 16.146 43.825 0.38 20 0 C2 V6R 2101 A 1 
HETATM 11 F F V6R . . . C 3 30.15 16.737 39.565 0.38 20 0 F V6R 2101 A 1 
HETATM 12 C C11 V6R . . . C 3 29.08 16.223 39.008 0.38 20 0 C11 V6R 2101 A 1 
HETATM 13 C C10 V6R . . . C 3 29.252 15.413 37.908 0.38 20 0 C10 V6R 2101 A 1 
HETATM 14 N N V6R . . . C 3 28.094 16.649 41.922 0.38 20 0 N V6R 2101 A 1 
HETATM 15 O O V6R . . . C 3 29.867 18.016 42.401 0.38 20 0 O V6R 2101 A 1 
HETATM 16 C C V6R . . . C 3 30.542 16.45 46.198 0.38 20 0 C V6R 2101 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#