data_5SUG # _model_server_result.job_id ZK-GNi6KOGv2tg5SBlxEZw _model_server_result.datetime_utc '2024-11-28 11:03:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sug # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 5SUG # _exptl.entry_id 5SUG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 232.297 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-methylpropyl [(3R)-1,1-dioxo-2,3-dihydro-1H-1lambda~6~-thiophen-3-yl]acetate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.49 _cell.angle_gamma 90 _cell.entry_id 5SUG _cell.length_a 88.619 _cell.length_b 81.882 _cell.length_c 93.526 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SUG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C10 H16 O4 S' _chem_comp.formula_weight 232.297 _chem_comp.id W1E _chem_comp.mon_nstd_flag . _chem_comp.name '2-methylpropyl [(3R)-1,1-dioxo-2,3-dihydro-1H-1lambda~6~-thiophen-3-yl]acetate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 W1E sing 376 n n C3 C1 W1E sing 377 n n C3 O W1E sing 378 n n O1 C4 W1E doub 379 n n C1 C2 W1E sing 380 n n C9 C8 W1E doub 381 n n C9 C6 W1E sing 382 n n C4 O W1E sing 383 n n C4 C5 W1E sing 384 n n C8 S W1E sing 385 n n C6 C5 W1E sing 386 n n C6 C7 W1E sing 387 n n O3 S W1E doub 388 n n S C7 W1E sing 389 n n S O2 W1E doub 390 n n C7 H1 W1E sing 391 n n C7 H2 W1E sing 392 n n C8 H3 W1E sing 393 n n C9 H4 W1E sing 394 n n C1 H5 W1E sing 395 n n C5 H6 W1E sing 396 n n C5 H7 W1E sing 397 n n C6 H8 W1E sing 398 n n C3 H9 W1E sing 399 n n C3 H10 W1E sing 400 n n C2 H11 W1E sing 401 n n C2 H12 W1E sing 402 n n C2 H13 W1E sing 403 n n C H14 W1E sing 404 n n C H15 W1E sing 405 n n C H16 W1E sing 406 n n # _atom_sites.entry_id 5SUG _atom_sites.fract_transf_matrix[1][1] 0.011284 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003773 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 W1E A 1 2101 2101 W1E XXX . D 3 W1E B 1 401 401 W1E XXX . E 4 HOH A 1 2201 99 HOH HOH . E 4 HOH A 2 2202 124 HOH HOH . E 4 HOH A 3 2203 76 HOH HOH . E 4 HOH A 4 2204 20 HOH HOH . E 4 HOH A 5 2205 91 HOH HOH . E 4 HOH A 6 2206 2 HOH HOH . E 4 HOH A 7 2207 6 HOH HOH . E 4 HOH A 8 2208 15 HOH HOH . E 4 HOH A 9 2209 26 HOH HOH . E 4 HOH A 10 2210 61 HOH HOH . E 4 HOH A 11 2211 39 HOH HOH . E 4 HOH A 12 2212 9 HOH HOH . E 4 HOH A 13 2213 23 HOH HOH . E 4 HOH A 14 2214 90 HOH HOH . E 4 HOH A 15 2215 17 HOH HOH . E 4 HOH A 16 2216 117 HOH HOH . E 4 HOH A 17 2217 74 HOH HOH . E 4 HOH A 18 2218 78 HOH HOH . E 4 HOH A 19 2219 67 HOH HOH . E 4 HOH A 20 2220 93 HOH HOH . E 4 HOH A 21 2221 50 HOH HOH . E 4 HOH A 22 2222 12 HOH HOH . E 4 HOH A 23 2223 10 HOH HOH . E 4 HOH A 24 2224 52 HOH HOH . E 4 HOH A 25 2225 7 HOH HOH . E 4 HOH A 26 2226 53 HOH HOH . E 4 HOH A 27 2227 104 HOH HOH . E 4 HOH A 28 2228 75 HOH HOH . E 4 HOH A 29 2229 62 HOH HOH . E 4 HOH A 30 2230 11 HOH HOH . E 4 HOH A 31 2231 85 HOH HOH . E 4 HOH A 32 2232 13 HOH HOH . E 4 HOH A 33 2233 88 HOH HOH . E 4 HOH A 34 2234 108 HOH HOH . E 4 HOH A 35 2235 70 HOH HOH . E 4 HOH A 36 2236 21 HOH HOH . E 4 HOH A 37 2237 92 HOH HOH . E 4 HOH A 38 2238 109 HOH HOH . E 4 HOH A 39 2239 83 HOH HOH . E 4 HOH A 40 2240 84 HOH HOH . E 4 HOH A 41 2241 42 HOH HOH . E 4 HOH A 42 2242 4 HOH HOH . E 4 HOH A 43 2243 38 HOH HOH . E 4 HOH A 44 2244 73 HOH HOH . E 4 HOH A 45 2245 64 HOH HOH . E 4 HOH A 46 2246 32 HOH HOH . E 4 HOH A 47 2247 56 HOH HOH . E 4 HOH A 48 2248 69 HOH HOH . E 4 HOH A 49 2249 103 HOH HOH . E 4 HOH A 50 2250 35 HOH HOH . E 4 HOH A 51 2251 58 HOH HOH . E 4 HOH A 52 2252 94 HOH HOH . E 4 HOH A 53 2253 41 HOH HOH . E 4 HOH A 54 2254 48 HOH HOH . E 4 HOH A 55 2255 44 HOH HOH . E 4 HOH A 56 2256 87 HOH HOH . E 4 HOH A 57 2257 113 HOH HOH . E 4 HOH A 58 2258 100 HOH HOH . E 4 HOH A 59 2259 105 HOH HOH . E 4 HOH A 60 2260 114 HOH HOH . F 4 HOH B 1 501 60 HOH HOH . F 4 HOH B 2 502 72 HOH HOH . F 4 HOH B 3 503 123 HOH HOH . F 4 HOH B 4 504 33 HOH HOH . F 4 HOH B 5 505 18 HOH HOH . F 4 HOH B 6 506 45 HOH HOH . F 4 HOH B 7 507 37 HOH HOH . F 4 HOH B 8 508 59 HOH HOH . F 4 HOH B 9 509 54 HOH HOH . F 4 HOH B 10 510 3 HOH HOH . F 4 HOH B 11 511 80 HOH HOH . F 4 HOH B 12 512 19 HOH HOH . F 4 HOH B 13 513 120 HOH HOH . F 4 HOH B 14 514 16 HOH HOH . F 4 HOH B 15 515 121 HOH HOH . F 4 HOH B 16 516 112 HOH HOH . F 4 HOH B 17 517 46 HOH HOH . F 4 HOH B 18 518 89 HOH HOH . F 4 HOH B 19 519 28 HOH HOH . F 4 HOH B 20 520 106 HOH HOH . F 4 HOH B 21 521 122 HOH HOH . F 4 HOH B 22 522 95 HOH HOH . F 4 HOH B 23 523 29 HOH HOH . F 4 HOH B 24 524 63 HOH HOH . F 4 HOH B 25 525 40 HOH HOH . F 4 HOH B 26 526 36 HOH HOH . F 4 HOH B 27 527 82 HOH HOH . F 4 HOH B 28 528 107 HOH HOH . F 4 HOH B 29 529 102 HOH HOH . F 4 HOH B 30 530 111 HOH HOH . F 4 HOH B 31 531 8 HOH HOH . F 4 HOH B 32 532 66 HOH HOH . F 4 HOH B 33 533 65 HOH HOH . F 4 HOH B 34 534 31 HOH HOH . F 4 HOH B 35 535 98 HOH HOH . F 4 HOH B 36 536 55 HOH HOH . F 4 HOH B 37 537 25 HOH HOH . F 4 HOH B 38 538 24 HOH HOH . F 4 HOH B 39 539 14 HOH HOH . F 4 HOH B 40 540 49 HOH HOH . F 4 HOH B 41 541 27 HOH HOH . F 4 HOH B 42 542 30 HOH HOH . F 4 HOH B 43 543 110 HOH HOH . F 4 HOH B 44 544 43 HOH HOH . F 4 HOH B 45 545 34 HOH HOH . F 4 HOH B 46 546 81 HOH HOH . F 4 HOH B 47 547 5 HOH HOH . F 4 HOH B 48 548 57 HOH HOH . F 4 HOH B 49 549 22 HOH HOH . F 4 HOH B 50 550 101 HOH HOH . F 4 HOH B 51 551 97 HOH HOH . F 4 HOH B 52 552 79 HOH HOH . F 4 HOH B 53 553 118 HOH HOH . F 4 HOH B 54 554 71 HOH HOH . F 4 HOH B 55 555 119 HOH HOH . F 4 HOH B 56 556 47 HOH HOH . F 4 HOH B 57 557 116 HOH HOH . F 4 HOH B 58 558 86 HOH HOH . F 4 HOH B 59 559 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 W1E . . . D 3 -0.775 13.152 -35.915 0.24 20 0 C7 W1E 401 B 1 HETATM 2 C C8 W1E . . . D 3 -2.364 13.151 -34.099 0.24 20 0 C8 W1E 401 B 1 HETATM 3 C C9 W1E . . . D 3 -2.427 14.348 -34.682 0.24 20 0 C9 W1E 401 B 1 HETATM 4 O O1 W1E . . . D 3 0.377 14.693 -37.864 0.24 20 0 O1 W1E 401 B 1 HETATM 5 C C1 W1E . . . D 3 -0.756 16.87 -40.849 0.24 20 0 C1 W1E 401 B 1 HETATM 6 C C5 W1E . . . D 3 -1.154 15.668 -36.334 0.24 20 0 C5 W1E 401 B 1 HETATM 7 C C6 W1E . . . D 3 -1.778 14.313 -36.043 0.24 20 0 C6 W1E 401 B 1 HETATM 8 C C4 W1E . . . D 3 -0.372 15.596 -37.614 0.24 20 0 C4 W1E 401 B 1 HETATM 9 C C3 W1E . . . D 3 0.267 16.506 -39.773 0.24 20 0 C3 W1E 401 B 1 HETATM 10 O O3 W1E . . . D 3 -2.537 11.341 -35.839 0.24 20 0 O3 W1E 401 B 1 HETATM 11 C C2 W1E . . . D 3 -0.094 16.677 -42.21 0.24 20 0 C2 W1E 401 B 1 HETATM 12 S S W1E . . . D 3 -1.642 11.982 -34.976 0.24 20 0 S W1E 401 B 1 HETATM 13 O O2 W1E . . . D 3 -0.761 11.201 -34.205 0.24 20 0 O2 W1E 401 B 1 HETATM 14 O O W1E . . . D 3 -0.462 16.566 -38.569 0.24 20 0 O W1E 401 B 1 HETATM 15 C C W1E . . . D 3 -1.162 18.323 -40.66 0.24 20 0 C W1E 401 B 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #