data_5SUN # _model_server_result.job_id m8ZUnCqpRarc072Q1QbBCw _model_server_result.datetime_utc '2024-11-22 00:06:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5SUN # _exptl.entry_id 5SUN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SUN _cell.length_a 82.563 _cell.length_b 82.563 _cell.length_c 302.55 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 I N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 313 n n PA O2A NDP sing 314 n n PA O5B NDP sing 315 n n PA O3 NDP sing 316 n n O2A HOA2 NDP sing 317 n n O5B C5B NDP sing 318 n n C5B C4B NDP sing 319 n n C5B H51A NDP sing 320 n n C5B H52A NDP sing 321 n n C4B O4B NDP sing 322 n n C4B C3B NDP sing 323 n n C4B H4B NDP sing 324 n n O4B C1B NDP sing 325 n n C3B O3B NDP sing 326 n n C3B C2B NDP sing 327 n n C3B H3B NDP sing 328 n n O3B HO3A NDP sing 329 n n C2B O2B NDP sing 330 n n C2B C1B NDP sing 331 n n C2B H2B NDP sing 332 n n O2B P2B NDP sing 333 n n C1B N9A NDP sing 334 n n C1B H1B NDP sing 335 n n N9A C8A NDP sing 336 n y N9A C4A NDP sing 337 n y C8A N7A NDP doub 338 n y C8A H8A NDP sing 339 n n N7A C5A NDP sing 340 n y C5A C6A NDP sing 341 n y C5A C4A NDP doub 342 n y C6A N6A NDP sing 343 n n C6A N1A NDP doub 344 n y N6A H61A NDP sing 345 n n N6A H62A NDP sing 346 n n N1A C2A NDP sing 347 n y C2A N3A NDP doub 348 n y C2A H2A NDP sing 349 n n N3A C4A NDP sing 350 n y O3 PN NDP sing 351 n n PN O1N NDP doub 352 n n PN O2N NDP sing 353 n n PN O5D NDP sing 354 n n O2N H21N NDP sing 355 n n O5D C5D NDP sing 356 n n C5D C4D NDP sing 357 n n C5D H51N NDP sing 358 n n C5D H52N NDP sing 359 n n C4D O4D NDP sing 360 n n C4D C3D NDP sing 361 n n C4D H4D NDP sing 362 n n O4D C1D NDP sing 363 n n C3D O3D NDP sing 364 n n C3D C2D NDP sing 365 n n C3D H3D NDP sing 366 n n O3D HO3N NDP sing 367 n n C2D O2D NDP sing 368 n n C2D C1D NDP sing 369 n n C2D H2D NDP sing 370 n n O2D HO2N NDP sing 371 n n C1D N1N NDP sing 372 n n C1D H1D NDP sing 373 n n N1N C2N NDP sing 374 n n N1N C6N NDP sing 375 n n C2N C3N NDP doub 376 n n C2N H2N NDP sing 377 n n C3N C7N NDP sing 378 n n C3N C4N NDP sing 379 n n C7N O7N NDP doub 380 n n C7N N7N NDP sing 381 n n N7N H71N NDP sing 382 n n N7N H72N NDP sing 383 n n C4N C5N NDP sing 384 n n C4N H41N NDP sing 385 n n C4N H42N NDP sing 386 n n C5N C6N NDP doub 387 n n C5N H5N NDP sing 388 n n C6N H6N NDP sing 389 n n P2B O1X NDP doub 390 n n P2B O2X NDP sing 391 n n P2B O3X NDP sing 392 n n O2X HOP2 NDP sing 393 n n O3X HOP3 NDP sing 394 n n # _atom_sites.entry_id 5SUN _atom_sites.fract_transf_matrix[1][1] 0.012112 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 501 1 NDP NDP . D 3 70Q A 1 502 2 70Q LI1 . E 4 SO4 A 1 503 1 SO4 SO4 . F 4 SO4 A 1 504 3 SO4 SO4 . G 5 EDO A 1 505 5 EDO EDO . H 6 DMS A 1 506 8 DMS DMS . I 2 NDP B 1 501 1 NDP NDP . J 3 70Q B 1 502 2 70Q LI1 . K 4 SO4 B 1 503 2 SO4 SO4 . L 4 SO4 B 1 504 4 SO4 SO4 . M 5 EDO B 1 505 6 EDO EDO . N 6 DMS B 1 506 7 DMS DMS . O 7 HOH A 1 601 28 HOH HOH . O 7 HOH A 2 602 26 HOH HOH . O 7 HOH A 3 603 15 HOH HOH . O 7 HOH A 4 604 59 HOH HOH . O 7 HOH A 5 605 5 HOH HOH . O 7 HOH A 6 606 71 HOH HOH . O 7 HOH A 7 607 49 HOH HOH . O 7 HOH A 8 608 80 HOH HOH . O 7 HOH A 9 609 48 HOH HOH . O 7 HOH A 10 610 23 HOH HOH . O 7 HOH A 11 611 30 HOH HOH . O 7 HOH A 12 612 38 HOH HOH . O 7 HOH A 13 613 2 HOH HOH . O 7 HOH A 14 614 21 HOH HOH . O 7 HOH A 15 615 1 HOH HOH . O 7 HOH A 16 616 32 HOH HOH . O 7 HOH A 17 617 37 HOH HOH . O 7 HOH A 18 618 4 HOH HOH . O 7 HOH A 19 619 8 HOH HOH . O 7 HOH A 20 620 57 HOH HOH . O 7 HOH A 21 621 19 HOH HOH . O 7 HOH A 22 622 69 HOH HOH . O 7 HOH A 23 623 35 HOH HOH . O 7 HOH A 24 624 18 HOH HOH . O 7 HOH A 25 625 40 HOH HOH . O 7 HOH A 26 626 54 HOH HOH . O 7 HOH A 27 627 51 HOH HOH . O 7 HOH A 28 628 39 HOH HOH . O 7 HOH A 29 629 64 HOH HOH . O 7 HOH A 30 630 16 HOH HOH . O 7 HOH A 31 631 55 HOH HOH . O 7 HOH A 32 632 62 HOH HOH . O 7 HOH A 33 633 36 HOH HOH . O 7 HOH A 34 634 41 HOH HOH . O 7 HOH A 35 635 66 HOH HOH . O 7 HOH A 36 636 78 HOH HOH . O 7 HOH A 37 637 60 HOH HOH . O 7 HOH A 38 638 65 HOH HOH . O 7 HOH A 39 639 76 HOH HOH . O 7 HOH A 40 640 75 HOH HOH . O 7 HOH A 41 641 70 HOH HOH . O 7 HOH A 42 642 58 HOH HOH . P 7 HOH B 1 601 7 HOH HOH . P 7 HOH B 2 602 68 HOH HOH . P 7 HOH B 3 603 44 HOH HOH . P 7 HOH B 4 604 63 HOH HOH . P 7 HOH B 5 605 3 HOH HOH . P 7 HOH B 6 606 17 HOH HOH . P 7 HOH B 7 607 11 HOH HOH . P 7 HOH B 8 608 20 HOH HOH . P 7 HOH B 9 609 79 HOH HOH . P 7 HOH B 10 610 61 HOH HOH . P 7 HOH B 11 611 10 HOH HOH . P 7 HOH B 12 612 14 HOH HOH . P 7 HOH B 13 613 56 HOH HOH . P 7 HOH B 14 614 53 HOH HOH . P 7 HOH B 15 615 9 HOH HOH . P 7 HOH B 16 616 52 HOH HOH . P 7 HOH B 17 617 13 HOH HOH . P 7 HOH B 18 618 25 HOH HOH . P 7 HOH B 19 619 6 HOH HOH . P 7 HOH B 20 620 50 HOH HOH . P 7 HOH B 21 621 34 HOH HOH . P 7 HOH B 22 622 29 HOH HOH . P 7 HOH B 23 623 67 HOH HOH . P 7 HOH B 24 624 24 HOH HOH . P 7 HOH B 25 625 22 HOH HOH . P 7 HOH B 26 626 33 HOH HOH . P 7 HOH B 27 627 27 HOH HOH . P 7 HOH B 28 628 46 HOH HOH . P 7 HOH B 29 629 12 HOH HOH . P 7 HOH B 30 630 45 HOH HOH . P 7 HOH B 31 631 72 HOH HOH . P 7 HOH B 32 632 43 HOH HOH . P 7 HOH B 33 633 42 HOH HOH . P 7 HOH B 34 634 77 HOH HOH . P 7 HOH B 35 635 47 HOH HOH . P 7 HOH B 36 636 73 HOH HOH . P 7 HOH B 37 637 74 HOH HOH . P 7 HOH B 38 638 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 29.225 -16.526 -14.047 1 56.15 ? PA NDP 501 A 1 HETATM 2 O O1A NDP . . . C 2 28.994 -17.192 -15.381 1 51.91 ? O1A NDP 501 A 1 HETATM 3 O O2A NDP . . . C 2 29.191 -15.02 -13.942 1 62 ? O2A NDP 501 A 1 HETATM 4 O O5B NDP . . . C 2 28.183 -17.092 -12.972 1 57.79 ? O5B NDP 501 A 1 HETATM 5 C C5B NDP . . . C 2 27.11 -17.863 -13.467 1 58.73 ? C5B NDP 501 A 1 HETATM 6 C C4B NDP . . . C 2 26.066 -18.105 -12.4 1 53.81 ? C4B NDP 501 A 1 HETATM 7 O O4B NDP . . . C 2 25.537 -16.879 -11.878 1 57.12 ? O4B NDP 501 A 1 HETATM 8 C C3B NDP . . . C 2 24.948 -18.789 -13.144 1 54.32 ? C3B NDP 501 A 1 HETATM 9 O O3B NDP . . . C 2 24.945 -20.175 -12.798 1 59.19 ? O3B NDP 501 A 1 HETATM 10 C C2B NDP . . . C 2 23.692 -18.045 -12.744 1 54.18 ? C2B NDP 501 A 1 HETATM 11 O O2B NDP . . . C 2 23.149 -18.663 -11.581 1 60.21 ? O2B NDP 501 A 1 HETATM 12 C C1B NDP . . . C 2 24.205 -16.662 -12.361 1 57.72 ? C1B NDP 501 A 1 HETATM 13 N N9A NDP . . . C 2 24.276 -15.723 -13.522 1 56.46 ? N9A NDP 501 A 1 HETATM 14 C C8A NDP . . . C 2 25.388 -15.098 -13.947 1 54.17 ? C8A NDP 501 A 1 HETATM 15 N N7A NDP . . . C 2 25.099 -14.316 -15.011 1 49.72 ? N7A NDP 501 A 1 HETATM 16 C C5A NDP . . . C 2 23.781 -14.437 -15.246 1 52.61 ? C5A NDP 501 A 1 HETATM 17 C C6A NDP . . . C 2 22.932 -13.874 -16.191 1 53.08 ? C6A NDP 501 A 1 HETATM 18 N N6A NDP . . . C 2 23.417 -13.012 -17.118 1 44.06 ? N6A NDP 501 A 1 HETATM 19 N N1A NDP . . . C 2 21.621 -14.199 -16.179 1 51.45 ? N1A NDP 501 A 1 HETATM 20 C C2A NDP . . . C 2 21.144 -15.051 -15.263 1 50.64 ? C2A NDP 501 A 1 HETATM 21 N N3A NDP . . . C 2 21.943 -15.607 -14.339 1 56.16 ? N3A NDP 501 A 1 HETATM 22 C C4A NDP . . . C 2 23.264 -15.315 -14.303 1 51.88 ? C4A NDP 501 A 1 HETATM 23 O O3 NDP . . . C 2 30.593 -17.086 -13.413 1 61.75 ? O3 NDP 501 A 1 HETATM 24 P PN NDP . . . C 2 30.944 -18.659 -13.497 1 63.27 ? PN NDP 501 A 1 HETATM 25 O O1N NDP . . . C 2 31.567 -19.036 -12.177 1 67.55 ? O1N NDP 501 A 1 HETATM 26 O O2N NDP . . . C 2 29.787 -19.468 -14.041 1 55.71 ? O2N NDP 501 A 1 HETATM 27 O O5D NDP . . . C 2 32.089 -18.632 -14.621 1 63.45 ? O5D NDP 501 A 1 HETATM 28 C C5D NDP . . . C 2 31.889 -19.322 -15.849 1 53.53 ? C5D NDP 501 A 1 HETATM 29 C C4D NDP . . . C 2 32.938 -18.841 -16.84 1 58.19 ? C4D NDP 501 A 1 HETATM 30 O O4D NDP . . . C 2 32.862 -17.42 -17.023 1 53.25 ? O4D NDP 501 A 1 HETATM 31 C C3D NDP . . . C 2 34.342 -19.166 -16.355 1 52.04 ? C3D NDP 501 A 1 HETATM 32 O O3D NDP . . . C 2 35.039 -19.815 -17.419 1 54.61 ? O3D NDP 501 A 1 HETATM 33 C C2D NDP . . . C 2 34.984 -17.831 -16.047 1 53.52 ? C2D NDP 501 A 1 HETATM 34 O O2D NDP . . . C 2 36.355 -17.826 -16.452 1 57.32 ? O2D NDP 501 A 1 HETATM 35 C C1D NDP . . . C 2 34.165 -16.847 -16.868 1 56.58 ? C1D NDP 501 A 1 HETATM 36 N N1N NDP . . . C 2 34.125 -15.496 -16.294 1 59.75 ? N1N NDP 501 A 1 HETATM 37 C C2N NDP . . . C 2 34.403 -14.471 -17.107 1 56.44 ? C2N NDP 501 A 1 HETATM 38 C C3N NDP . . . C 2 34.384 -13.158 -16.661 1 60.01 ? C3N NDP 501 A 1 HETATM 39 C C7N NDP . . . C 2 34.712 -12.045 -17.62 1 60.93 ? C7N NDP 501 A 1 HETATM 40 O O7N NDP . . . C 2 35.149 -12.315 -18.732 1 54.75 ? O7N NDP 501 A 1 HETATM 41 N N7N NDP . . . C 2 34.512 -10.785 -17.239 1 63.32 ? N7N NDP 501 A 1 HETATM 42 C C4N NDP . . . C 2 34.059 -12.908 -15.334 1 58.54 ? C4N NDP 501 A 1 HETATM 43 C C5N NDP . . . C 2 33.766 -13.986 -14.504 1 59.31 ? C5N NDP 501 A 1 HETATM 44 C C6N NDP . . . C 2 33.801 -15.285 -15.011 1 57.99 ? C6N NDP 501 A 1 HETATM 45 P P2B NDP . . . C 2 22.079 -19.866 -11.679 1 63.3 ? P2B NDP 501 A 1 HETATM 46 O O1X NDP . . . C 2 21.549 -19.982 -10.268 1 75.12 ? O1X NDP 501 A 1 HETATM 47 O O2X NDP . . . C 2 22.885 -21.06 -12.127 1 63.2 ? O2X NDP 501 A 1 HETATM 48 O O3X NDP . . . C 2 21.067 -19.385 -12.691 1 63.35 ? O3X NDP 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 58 _model_server_stats.create_model_time_ms 57 _model_server_stats.query_time_ms 410 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #