data_5SUN # _model_server_result.job_id 523IFmn2BdAefsHPO1fK_g _model_server_result.datetime_utc '2024-11-21 23:41:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":506}' # _entry.id 5SUN # _exptl.entry_id 5SUN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SUN _cell.length_a 82.563 _cell.length_b 82.563 _cell.length_c 302.55 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 N N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 141 n n S C1 DMS sing 142 n n S C2 DMS sing 143 n n C1 H11 DMS sing 144 n n C1 H12 DMS sing 145 n n C1 H13 DMS sing 146 n n C2 H21 DMS sing 147 n n C2 H22 DMS sing 148 n n C2 H23 DMS sing 149 n n # _atom_sites.entry_id 5SUN _atom_sites.fract_transf_matrix[1][1] 0.012112 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 501 1 NDP NDP . D 3 70Q A 1 502 2 70Q LI1 . E 4 SO4 A 1 503 1 SO4 SO4 . F 4 SO4 A 1 504 3 SO4 SO4 . G 5 EDO A 1 505 5 EDO EDO . H 6 DMS A 1 506 8 DMS DMS . I 2 NDP B 1 501 1 NDP NDP . J 3 70Q B 1 502 2 70Q LI1 . K 4 SO4 B 1 503 2 SO4 SO4 . L 4 SO4 B 1 504 4 SO4 SO4 . M 5 EDO B 1 505 6 EDO EDO . N 6 DMS B 1 506 7 DMS DMS . O 7 HOH A 1 601 28 HOH HOH . O 7 HOH A 2 602 26 HOH HOH . O 7 HOH A 3 603 15 HOH HOH . O 7 HOH A 4 604 59 HOH HOH . O 7 HOH A 5 605 5 HOH HOH . O 7 HOH A 6 606 71 HOH HOH . O 7 HOH A 7 607 49 HOH HOH . O 7 HOH A 8 608 80 HOH HOH . O 7 HOH A 9 609 48 HOH HOH . O 7 HOH A 10 610 23 HOH HOH . O 7 HOH A 11 611 30 HOH HOH . O 7 HOH A 12 612 38 HOH HOH . O 7 HOH A 13 613 2 HOH HOH . O 7 HOH A 14 614 21 HOH HOH . O 7 HOH A 15 615 1 HOH HOH . O 7 HOH A 16 616 32 HOH HOH . O 7 HOH A 17 617 37 HOH HOH . O 7 HOH A 18 618 4 HOH HOH . O 7 HOH A 19 619 8 HOH HOH . O 7 HOH A 20 620 57 HOH HOH . O 7 HOH A 21 621 19 HOH HOH . O 7 HOH A 22 622 69 HOH HOH . O 7 HOH A 23 623 35 HOH HOH . O 7 HOH A 24 624 18 HOH HOH . O 7 HOH A 25 625 40 HOH HOH . O 7 HOH A 26 626 54 HOH HOH . O 7 HOH A 27 627 51 HOH HOH . O 7 HOH A 28 628 39 HOH HOH . O 7 HOH A 29 629 64 HOH HOH . O 7 HOH A 30 630 16 HOH HOH . O 7 HOH A 31 631 55 HOH HOH . O 7 HOH A 32 632 62 HOH HOH . O 7 HOH A 33 633 36 HOH HOH . O 7 HOH A 34 634 41 HOH HOH . O 7 HOH A 35 635 66 HOH HOH . O 7 HOH A 36 636 78 HOH HOH . O 7 HOH A 37 637 60 HOH HOH . O 7 HOH A 38 638 65 HOH HOH . O 7 HOH A 39 639 76 HOH HOH . O 7 HOH A 40 640 75 HOH HOH . O 7 HOH A 41 641 70 HOH HOH . O 7 HOH A 42 642 58 HOH HOH . P 7 HOH B 1 601 7 HOH HOH . P 7 HOH B 2 602 68 HOH HOH . P 7 HOH B 3 603 44 HOH HOH . P 7 HOH B 4 604 63 HOH HOH . P 7 HOH B 5 605 3 HOH HOH . P 7 HOH B 6 606 17 HOH HOH . P 7 HOH B 7 607 11 HOH HOH . P 7 HOH B 8 608 20 HOH HOH . P 7 HOH B 9 609 79 HOH HOH . P 7 HOH B 10 610 61 HOH HOH . P 7 HOH B 11 611 10 HOH HOH . P 7 HOH B 12 612 14 HOH HOH . P 7 HOH B 13 613 56 HOH HOH . P 7 HOH B 14 614 53 HOH HOH . P 7 HOH B 15 615 9 HOH HOH . P 7 HOH B 16 616 52 HOH HOH . P 7 HOH B 17 617 13 HOH HOH . P 7 HOH B 18 618 25 HOH HOH . P 7 HOH B 19 619 6 HOH HOH . P 7 HOH B 20 620 50 HOH HOH . P 7 HOH B 21 621 34 HOH HOH . P 7 HOH B 22 622 29 HOH HOH . P 7 HOH B 23 623 67 HOH HOH . P 7 HOH B 24 624 24 HOH HOH . P 7 HOH B 25 625 22 HOH HOH . P 7 HOH B 26 626 33 HOH HOH . P 7 HOH B 27 627 27 HOH HOH . P 7 HOH B 28 628 46 HOH HOH . P 7 HOH B 29 629 12 HOH HOH . P 7 HOH B 30 630 45 HOH HOH . P 7 HOH B 31 631 72 HOH HOH . P 7 HOH B 32 632 43 HOH HOH . P 7 HOH B 33 633 42 HOH HOH . P 7 HOH B 34 634 77 HOH HOH . P 7 HOH B 35 635 47 HOH HOH . P 7 HOH B 36 636 73 HOH HOH . P 7 HOH B 37 637 74 HOH HOH . P 7 HOH B 38 638 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . H 6 38.477 -12.914 -14.158 1 107.24 ? S DMS 506 A 1 HETATM 2 O O DMS . . . H 6 39.956 -12.903 -14.231 1 98.25 ? O DMS 506 A 1 HETATM 3 C C1 DMS . . . H 6 37.829 -12.073 -15.493 1 78.03 ? C1 DMS 506 A 1 HETATM 4 C C2 DMS . . . H 6 37.89 -14.485 -14.483 1 72.28 ? C2 DMS 506 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #