data_5SVN
#
_model_server_result.job_id            iyFWXeZ4VNehI43aU-pj7Q 
_model_server_result.datetime_utc      '2024-10-10 19:16:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5svn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    5SVN 
#
_exptl.entry_id    5SVN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.27 
_cell.angle_gamma         90 
_cell.entry_id            5SVN 
_cell.length_a            66.691 
_cell.length_b            59.292 
_cell.length_c            105.162 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5SVN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 319 n n 
C1 C2 PEG sing 320 n n 
C1 H11 PEG sing 321 n n 
C1 H12 PEG sing 322 n n 
O1 HO1 PEG sing 323 n n 
C2 O2 PEG sing 324 n n 
C2 H21 PEG sing 325 n n 
C2 H22 PEG sing 326 n n 
O2 C3 PEG sing 327 n n 
C3 C4 PEG sing 328 n n 
C3 H31 PEG sing 329 n n 
C3 H32 PEG sing 330 n n 
C4 O4 PEG sing 331 n n 
C4 H41 PEG sing 332 n n 
C4 H42 PEG sing 333 n n 
O4 HO4 PEG sing 334 n n 
#
_atom_sites.entry_id                     5SVN 
_atom_sites.fract_transf_matrix[1][1]    0.014995 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000857 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016866 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009525 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 501 1 NDP NDP . 
D 3 PEG A 1 502 1 PEG PEG . 
E 2 NDP B 1 501 1 NDP NDP . 
F 3 PEG B 1 502 2 PEG PEG . 
G 4 HOH A 1 601 203 HOH HOH . 
G 4 HOH A 2 602 195 HOH HOH . 
G 4 HOH A 3 603 17 HOH HOH . 
G 4 HOH A 4 604 131 HOH HOH . 
G 4 HOH A 5 605 49 HOH HOH . 
G 4 HOH A 6 606 5 HOH HOH . 
G 4 HOH A 7 607 108 HOH HOH . 
G 4 HOH A 8 608 102 HOH HOH . 
G 4 HOH A 9 609 110 HOH HOH . 
G 4 HOH A 10 610 127 HOH HOH . 
G 4 HOH A 11 611 91 HOH HOH . 
G 4 HOH A 12 612 27 HOH HOH . 
G 4 HOH A 13 613 167 HOH HOH . 
G 4 HOH A 14 614 16 HOH HOH . 
G 4 HOH A 15 615 1 HOH HOH . 
G 4 HOH A 16 616 4 HOH HOH . 
G 4 HOH A 17 617 70 HOH HOH . 
G 4 HOH A 18 618 58 HOH HOH . 
G 4 HOH A 19 619 113 HOH HOH . 
G 4 HOH A 20 620 191 HOH HOH . 
G 4 HOH A 21 621 29 HOH HOH . 
G 4 HOH A 22 622 168 HOH HOH . 
G 4 HOH A 23 623 7 HOH HOH . 
G 4 HOH A 24 624 64 HOH HOH . 
G 4 HOH A 25 625 14 HOH HOH . 
G 4 HOH A 26 626 119 HOH HOH . 
G 4 HOH A 27 627 23 HOH HOH . 
G 4 HOH A 28 628 37 HOH HOH . 
G 4 HOH A 29 629 72 HOH HOH . 
G 4 HOH A 30 630 120 HOH HOH . 
G 4 HOH A 31 631 38 HOH HOH . 
G 4 HOH A 32 632 75 HOH HOH . 
G 4 HOH A 33 633 147 HOH HOH . 
G 4 HOH A 34 634 10 HOH HOH . 
G 4 HOH A 35 635 114 HOH HOH . 
G 4 HOH A 36 636 34 HOH HOH . 
G 4 HOH A 37 637 130 HOH HOH . 
G 4 HOH A 38 638 12 HOH HOH . 
G 4 HOH A 39 639 66 HOH HOH . 
G 4 HOH A 40 640 145 HOH HOH . 
G 4 HOH A 41 641 87 HOH HOH . 
G 4 HOH A 42 642 103 HOH HOH . 
G 4 HOH A 43 643 172 HOH HOH . 
G 4 HOH A 44 644 93 HOH HOH . 
G 4 HOH A 45 645 85 HOH HOH . 
G 4 HOH A 46 646 40 HOH HOH . 
G 4 HOH A 47 647 142 HOH HOH . 
G 4 HOH A 48 648 76 HOH HOH . 
G 4 HOH A 49 649 74 HOH HOH . 
G 4 HOH A 50 650 39 HOH HOH . 
G 4 HOH A 51 651 62 HOH HOH . 
G 4 HOH A 52 652 83 HOH HOH . 
G 4 HOH A 53 653 111 HOH HOH . 
G 4 HOH A 54 654 104 HOH HOH . 
G 4 HOH A 55 655 88 HOH HOH . 
G 4 HOH A 56 656 169 HOH HOH . 
G 4 HOH A 57 657 199 HOH HOH . 
G 4 HOH A 58 658 67 HOH HOH . 
G 4 HOH A 59 659 56 HOH HOH . 
G 4 HOH A 60 660 122 HOH HOH . 
G 4 HOH A 61 661 95 HOH HOH . 
G 4 HOH A 62 662 207 HOH HOH . 
G 4 HOH A 63 663 164 HOH HOH . 
G 4 HOH A 64 664 19 HOH HOH . 
G 4 HOH A 65 665 26 HOH HOH . 
G 4 HOH A 66 666 24 HOH HOH . 
G 4 HOH A 67 667 78 HOH HOH . 
G 4 HOH A 68 668 3 HOH HOH . 
G 4 HOH A 69 669 201 HOH HOH . 
G 4 HOH A 70 670 115 HOH HOH . 
G 4 HOH A 71 671 53 HOH HOH . 
G 4 HOH A 72 672 202 HOH HOH . 
G 4 HOH A 73 673 20 HOH HOH . 
G 4 HOH A 74 674 194 HOH HOH . 
G 4 HOH A 75 675 30 HOH HOH . 
G 4 HOH A 76 676 73 HOH HOH . 
G 4 HOH A 77 677 174 HOH HOH . 
G 4 HOH A 78 678 156 HOH HOH . 
G 4 HOH A 79 679 11 HOH HOH . 
G 4 HOH A 80 680 118 HOH HOH . 
G 4 HOH A 81 681 128 HOH HOH . 
G 4 HOH A 82 682 99 HOH HOH . 
G 4 HOH A 83 683 141 HOH HOH . 
G 4 HOH A 84 684 101 HOH HOH . 
G 4 HOH A 85 685 155 HOH HOH . 
G 4 HOH A 86 686 181 HOH HOH . 
G 4 HOH A 87 687 176 HOH HOH . 
G 4 HOH A 88 688 116 HOH HOH . 
G 4 HOH A 89 689 149 HOH HOH . 
G 4 HOH A 90 690 197 HOH HOH . 
G 4 HOH A 91 691 161 HOH HOH . 
G 4 HOH A 92 692 190 HOH HOH . 
G 4 HOH A 93 693 152 HOH HOH . 
G 4 HOH A 94 694 178 HOH HOH . 
G 4 HOH A 95 695 100 HOH HOH . 
G 4 HOH A 96 696 166 HOH HOH . 
G 4 HOH A 97 697 162 HOH HOH . 
G 4 HOH A 98 698 63 HOH HOH . 
G 4 HOH A 99 699 129 HOH HOH . 
G 4 HOH A 100 700 43 HOH HOH . 
G 4 HOH A 101 701 154 HOH HOH . 
G 4 HOH A 102 702 160 HOH HOH . 
G 4 HOH A 103 703 173 HOH HOH . 
G 4 HOH A 104 704 82 HOH HOH . 
G 4 HOH A 105 705 117 HOH HOH . 
G 4 HOH A 106 706 175 HOH HOH . 
G 4 HOH A 107 707 204 HOH HOH . 
G 4 HOH A 108 708 144 HOH HOH . 
H 4 HOH B 1 601 112 HOH HOH . 
H 4 HOH B 2 602 184 HOH HOH . 
H 4 HOH B 3 603 33 HOH HOH . 
H 4 HOH B 4 604 107 HOH HOH . 
H 4 HOH B 5 605 45 HOH HOH . 
H 4 HOH B 6 606 47 HOH HOH . 
H 4 HOH B 7 607 170 HOH HOH . 
H 4 HOH B 8 608 8 HOH HOH . 
H 4 HOH B 9 609 31 HOH HOH . 
H 4 HOH B 10 610 61 HOH HOH . 
H 4 HOH B 11 611 48 HOH HOH . 
H 4 HOH B 12 612 138 HOH HOH . 
H 4 HOH B 13 613 9 HOH HOH . 
H 4 HOH B 14 614 69 HOH HOH . 
H 4 HOH B 15 615 6 HOH HOH . 
H 4 HOH B 16 616 59 HOH HOH . 
H 4 HOH B 17 617 50 HOH HOH . 
H 4 HOH B 18 618 148 HOH HOH . 
H 4 HOH B 19 619 44 HOH HOH . 
H 4 HOH B 20 620 182 HOH HOH . 
H 4 HOH B 21 621 132 HOH HOH . 
H 4 HOH B 22 622 51 HOH HOH . 
H 4 HOH B 23 623 135 HOH HOH . 
H 4 HOH B 24 624 41 HOH HOH . 
H 4 HOH B 25 625 77 HOH HOH . 
H 4 HOH B 26 626 2 HOH HOH . 
H 4 HOH B 27 627 97 HOH HOH . 
H 4 HOH B 28 628 180 HOH HOH . 
H 4 HOH B 29 629 54 HOH HOH . 
H 4 HOH B 30 630 158 HOH HOH . 
H 4 HOH B 31 631 32 HOH HOH . 
H 4 HOH B 32 632 106 HOH HOH . 
H 4 HOH B 33 633 25 HOH HOH . 
H 4 HOH B 34 634 68 HOH HOH . 
H 4 HOH B 35 635 89 HOH HOH . 
H 4 HOH B 36 636 153 HOH HOH . 
H 4 HOH B 37 637 15 HOH HOH . 
H 4 HOH B 38 638 42 HOH HOH . 
H 4 HOH B 39 639 46 HOH HOH . 
H 4 HOH B 40 640 52 HOH HOH . 
H 4 HOH B 41 641 165 HOH HOH . 
H 4 HOH B 42 642 80 HOH HOH . 
H 4 HOH B 43 643 79 HOH HOH . 
H 4 HOH B 44 644 157 HOH HOH . 
H 4 HOH B 45 645 35 HOH HOH . 
H 4 HOH B 46 646 146 HOH HOH . 
H 4 HOH B 47 647 126 HOH HOH . 
H 4 HOH B 48 648 71 HOH HOH . 
H 4 HOH B 49 649 133 HOH HOH . 
H 4 HOH B 50 650 65 HOH HOH . 
H 4 HOH B 51 651 18 HOH HOH . 
H 4 HOH B 52 652 121 HOH HOH . 
H 4 HOH B 53 653 188 HOH HOH . 
H 4 HOH B 54 654 125 HOH HOH . 
H 4 HOH B 55 655 13 HOH HOH . 
H 4 HOH B 56 656 94 HOH HOH . 
H 4 HOH B 57 657 196 HOH HOH . 
H 4 HOH B 58 658 187 HOH HOH . 
H 4 HOH B 59 659 150 HOH HOH . 
H 4 HOH B 60 660 124 HOH HOH . 
H 4 HOH B 61 661 96 HOH HOH . 
H 4 HOH B 62 662 192 HOH HOH . 
H 4 HOH B 63 663 139 HOH HOH . 
H 4 HOH B 64 664 21 HOH HOH . 
H 4 HOH B 65 665 105 HOH HOH . 
H 4 HOH B 66 666 55 HOH HOH . 
H 4 HOH B 67 667 28 HOH HOH . 
H 4 HOH B 68 668 60 HOH HOH . 
H 4 HOH B 69 669 36 HOH HOH . 
H 4 HOH B 70 670 185 HOH HOH . 
H 4 HOH B 71 671 200 HOH HOH . 
H 4 HOH B 72 672 22 HOH HOH . 
H 4 HOH B 73 673 140 HOH HOH . 
H 4 HOH B 74 674 134 HOH HOH . 
H 4 HOH B 75 675 86 HOH HOH . 
H 4 HOH B 76 676 92 HOH HOH . 
H 4 HOH B 77 677 84 HOH HOH . 
H 4 HOH B 78 678 163 HOH HOH . 
H 4 HOH B 79 679 205 HOH HOH . 
H 4 HOH B 80 680 90 HOH HOH . 
H 4 HOH B 81 681 57 HOH HOH . 
H 4 HOH B 82 682 98 HOH HOH . 
H 4 HOH B 83 683 198 HOH HOH . 
H 4 HOH B 84 684 193 HOH HOH . 
H 4 HOH B 85 685 137 HOH HOH . 
H 4 HOH B 86 686 179 HOH HOH . 
H 4 HOH B 87 687 151 HOH HOH . 
H 4 HOH B 88 688 189 HOH HOH . 
H 4 HOH B 89 689 81 HOH HOH . 
H 4 HOH B 90 690 136 HOH HOH . 
H 4 HOH B 91 691 171 HOH HOH . 
H 4 HOH B 92 692 183 HOH HOH . 
H 4 HOH B 93 693 186 HOH HOH . 
H 4 HOH B 94 694 123 HOH HOH . 
H 4 HOH B 95 695 206 HOH HOH . 
H 4 HOH B 96 696 159 HOH HOH . 
H 4 HOH B 97 697 143 HOH HOH . 
H 4 HOH B 98 698 177 HOH HOH . 
H 4 HOH B 99 699 109 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . D 3 10.721 24.426 -42.175 1 53.26 ? C1 PEG 502 A 1 
HETATM 2 O O1 PEG . . . D 3 9.623 23.555 -42.409 1 52.57 ? O1 PEG 502 A 1 
HETATM 3 C C2 PEG . . . D 3 11.539 23.963 -41.011 1 53.92 ? C2 PEG 502 A 1 
HETATM 4 O O2 PEG . . . D 3 10.726 23.88 -39.846 1 51.18 ? O2 PEG 502 A 1 
HETATM 5 C C3 PEG . . . D 3 10.544 22.555 -39.373 1 45.63 ? C3 PEG 502 A 1 
HETATM 6 C C4 PEG . . . D 3 10.31 22.562 -37.902 1 45.09 ? C4 PEG 502 A 1 
HETATM 7 O O4 PEG . . . D 3 11.446 23.049 -37.216 1 52 ? O4 PEG 502 A 1 
#
_model_server_stats.io_time_ms              66 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           7 
#