data_5SWP # _model_server_result.job_id l5gQlUsF8GYDKa54RaC0Pg _model_server_result.datetime_utc '2025-06-24 03:38:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5swp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1102}' # _entry.id 5SWP # _exptl.entry_id 5SWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.278 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'tert-butyl 4-aminopiperidine-1-carboxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SWP _cell.length_a 114.12 _cell.length_b 116.131 _cell.length_c 148.334 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 34 A SER 6 1_555 A N SEP 35 A SEP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C SEP 35 A SEP 7 1_555 A N GLY 36 A GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C MET 817 A MET 789 1_555 A N SEP 818 A SEP 790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C SEP 818 A SEP 790 1_555 A N GLU 819 A GLU 791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C10 H20 N2 O2' _chem_comp.formula_weight 200.278 _chem_comp.id 70W _chem_comp.mon_nstd_flag . _chem_comp.name 'tert-butyl 4-aminopiperidine-1-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 C6 70W doub 20 n n C9 N8 70W sing 21 n n C9 C10 70W sing 22 n n C6 N8 70W sing 23 n n C6 O5 70W sing 24 n n C4 C1 70W sing 25 n n N8 C13 70W sing 26 n n C10 C11 70W sing 27 n n O5 C1 70W sing 28 n n C11 N14 70W sing 29 n n C11 C12 70W sing 30 n n C1 C3 70W sing 31 n n C1 C2 70W sing 32 n n C13 C12 70W sing 33 n n C2 H1 70W sing 34 n n C2 H2 70W sing 35 n n C2 H3 70W sing 36 n n C3 H4 70W sing 37 n n C3 H5 70W sing 38 n n C3 H6 70W sing 39 n n C4 H7 70W sing 40 n n C4 H8 70W sing 41 n n C4 H9 70W sing 42 n n C9 H10 70W sing 43 n n C9 H11 70W sing 44 n n C10 H12 70W sing 45 n n C10 H13 70W sing 46 n n C11 H14 70W sing 47 n n C12 H15 70W sing 48 n n C12 H16 70W sing 49 n n C13 H17 70W sing 50 n n C13 H18 70W sing 51 n n N14 H19 70W sing 52 n n N14 H20 70W sing 53 n n # _atom_sites.entry_id 5SWP _atom_sites.fract_transf_matrix[1][1] 0.008763 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 70W A 1 1101 1 70W 4B1 . D 3 70W A 1 1102 2 70W 4B1 . E 4 70V A 1 1103 2 70V 4A1 . F 5 CL A 1 1104 1 CL CL . G 4 70V B 1 701 1 70V 4A1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 70W . . . D 3 87.229 72.552 101.492 1 166.8 ? C1 70W 1102 A 1 HETATM 2 C C2 70W . . . D 3 86.292 72.974 100.338 1 162.05 ? C2 70W 1102 A 1 HETATM 3 C C3 70W . . . D 3 88.642 73.101 101.244 1 164.23 ? C3 70W 1102 A 1 HETATM 4 C C4 70W . . . D 3 87.257 71.027 101.731 1 159.7 ? C4 70W 1102 A 1 HETATM 5 C C6 70W . . . D 3 85.39 73.227 103.163 1 176.02 ? C6 70W 1102 A 1 HETATM 6 C C9 70W . . . D 3 84.368 74.38 105.072 1 154.13 ? C9 70W 1102 A 1 HETATM 7 C C10 70W . . . D 3 85.281 75.198 105.981 1 150.41 ? C10 70W 1102 A 1 HETATM 8 C C11 70W . . . D 3 86.107 76.237 105.212 1 148.12 ? C11 70W 1102 A 1 HETATM 9 C C12 70W . . . D 3 85.291 76.762 104.03 1 144.94 ? C12 70W 1102 A 1 HETATM 10 C C13 70W . . . D 3 85.046 75.644 103.021 1 153.65 ? C13 70W 1102 A 1 HETATM 11 O O5 70W . . . D 3 86.786 73.145 102.726 1 174.79 ? O5 70W 1102 A 1 HETATM 12 O O7 70W . . . D 3 84.651 72.268 102.975 1 175.54 ? O7 70W 1102 A 1 HETATM 13 N N8 70W . . . D 3 84.958 74.36 103.731 1 165.13 ? N8 70W 1102 A 1 HETATM 14 N N14 70W . . . D 3 86.564 77.347 106.098 1 145.43 ? N14 70W 1102 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 14 #